RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 KMT5AQ9NQR1 393 aa27.12■■□□□ 1.93
PVT1-204ENST00000517525 FOXD4L1Q9NU39 408 aa27.12■■□□□ 1.93
PVT1-204ENST00000517525 CLEC1BQ9P126 229 aa27.12■■□□□ 1.93
PVT1-204ENST00000517525 FAN1Q9Y2M0 1017 aa27.12■■□□□ 1.93
PVT1-204ENST00000517525 C2orf71A6NGG8 1288 aa27.11■■□□□ 1.93
PVT1-204ENST00000517525 CCDC169A6NNP5 214 aa27.11■■□□□ 1.93
PVT1-204ENST00000517525 CSPG5O95196 566 aa27.11■■□□□ 1.93
PVT1-204ENST00000517525 GLP2RO95838 553 aa27.11■■□□□ 1.93
PVT1-204ENST00000517525 EFEMP2O95967 443 aa27.11■■□□□ 1.93
PVT1-204ENST00000517525 CTSAP10619 480 aa27.11■■□□□ 1.93
PVT1-204ENST00000517525 SLC39A14Q15043 492 aa27.11■■□□□ 1.93
PVT1-204ENST00000517525 PLPP4Q5VZY2 271 aa27.11■■□□□ 1.93
PVT1-204ENST00000517525 FAM173BQ6P4H8 233 aa27.11■■□□□ 1.93
PVT1-204ENST00000517525 APBB1IPQ7Z5R6 666 aaPredicted RBP27.11■■□□□ 1.93
PVT1-204ENST00000517525 RBM23Q86U06 439 aaKnown RBP27.11■■□□□ 1.93
PVT1-204ENST00000517525 LRRC15Q8TF66 581 aa27.11■■□□□ 1.93
PVT1-204ENST00000517525 GBP3Q9H0R5 595 aa27.11■■□□□ 1.93
PVT1-204ENST00000517525 PTPRHQ9HD43 1115 aa27.11■■□□□ 1.93
PVT1-204ENST00000517525 ODF2LQ9ULJ1 636 aa27.11■■□□□ 1.93
PVT1-204ENST00000517525 HIDE1A8MVS5 230 aa27.1■■□□□ 1.93
PVT1-204ENST00000517525 NRP1O14786 923 aa27.1■■□□□ 1.93
PVT1-204ENST00000517525 SSBP05455 408 aaKnown RBP eCLIP27.1■■□□□ 1.93
PVT1-204ENST00000517525 SCP2P22307 547 aa27.1■■□□□ 1.93
PVT1-204ENST00000517525 AKAP5P24588 427 aa27.1■■□□□ 1.93
PVT1-204ENST00000517525 NASPP49321 788 aaPredicted RBP27.1■■□□□ 1.93
PVT1-204ENST00000517525 SCNN1GP51170 649 aa27.1■■□□□ 1.93
PVT1-204ENST00000517525 GRIK3Q13003 919 aa27.1■■□□□ 1.93
PVT1-204ENST00000517525 ATF7IP2Q5U623 682 aa27.1■■□□□ 1.93
PVT1-204ENST00000517525 EEF1DP3Q658K8 133 aa27.1■■□□□ 1.93
PVT1-204ENST00000517525 TAS1R3Q7RTX0 852 aa27.1■■□□□ 1.93
PVT1-204ENST00000517525 FAM178BQ8IXR5 827 aa27.1■■□□□ 1.93
PVT1-204ENST00000517525 VPS52Q8N1B4 723 aa27.1■■□□□ 1.93
PVT1-204ENST00000517525 ACO2Q99798 780 aaKnown RBP27.1■■□□□ 1.93
PVT1-204ENST00000517525 PRKAG3Q9UGI9 489 aa27.1■■□□□ 1.93
PVT1-204ENST00000517525 CD207Q9UJ71 328 aa27.1■■□□□ 1.93
PVT1-204ENST00000517525 PER2O15055 1255 aa27.09■■□□□ 1.93
PVT1-204ENST00000517525 PLCG1P19174 1290 aa27.09■■□□□ 1.93
PVT1-204ENST00000517525 NDUFV1P49821 464 aa27.09■■□□□ 1.93
PVT1-204ENST00000517525 SMTNP53814 917 aa27.09■■□□□ 1.93
PVT1-204ENST00000517525 SMAD4Q13485 552 aaKnown RBP27.09■■□□□ 1.93
PVT1-204ENST00000517525 EP400NLQ6ZTU2 488 aa27.09■■□□□ 1.93
PVT1-204ENST00000517525 VN1R2Q8NFZ6 395 aa27.09■■□□□ 1.93
PVT1-204ENST00000517525 RAD54LQ92698 747 aa27.09■■□□□ 1.93
PVT1-204ENST00000517525 NECAB3Q96P71 396 aaPredicted RBP27.09■■□□□ 1.93
PVT1-204ENST00000517525 USP28Q96RU2 1077 aa27.09■■□□□ 1.93
PVT1-204ENST00000517525 APOL6Q9BWW8 343 aa27.09■■□□□ 1.93
PVT1-204ENST00000517525 VN1R3Q9BXE9 311 aa27.09■■□□□ 1.93
PVT1-204ENST00000517525 BDP1A6H8Y1 2624 aa27.08■■□□□ 1.93
PVT1-204ENST00000517525 TCF20Q9UGU0 1960 aaKnown RBP27.08■■□□□ 1.93
PVT1-204ENST00000517525 BRD1O95696 1058 aa27.08■■□□□ 1.93
PVT1-204ENST00000517525 CXCL14O95715 111 aa27.08■■□□□ 1.93
PVT1-204ENST00000517525 DDIT3P35638 169 aa27.08■■□□□ 1.93
PVT1-204ENST00000517525 KARSQ15046 597 aaKnown RBP27.08■■□□□ 1.93
PVT1-204ENST00000517525 SMAD2Q15796 467 aaKnown RBP27.08■■□□□ 1.93
PVT1-204ENST00000517525 TMEM132AQ24JP5 1023 aa27.08■■□□□ 1.93
PVT1-204ENST00000517525 RNF168Q8IYW5 571 aaPredicted RBP27.08■■□□□ 1.93
PVT1-204ENST00000517525 SMRP1Q8NCR6 262 aa27.08■■□□□ 1.93
PVT1-204ENST00000517525 TMEM161BQ8NDZ6 487 aa27.08■■□□□ 1.93
PVT1-204ENST00000517525 MRPL4Q9BYD3 311 aaKnown RBP27.08■■□□□ 1.93
PVT1-204ENST00000517525 MARCH5Q9NX47 278 aa27.08■■□□□ 1.93
PVT1-204ENST00000517525 LARSQ9P2J5 1176 aaKnown RBP27.08■■□□□ 1.93
PVT1-204ENST00000517525 PARP2Q9UGN5 583 aa27.08■■□□□ 1.93
PVT1-204ENST00000517525 USP20Q9Y2K6 914 aa27.08■■□□□ 1.93
PVT1-204ENST00000517525 SFI1A8K8P3 1242 aa27.07■■□□□ 1.92
PVT1-204ENST00000517525 H0YCG3 227 aa27.07■■□□□ 1.92
PVT1-204ENST00000517525 MBTPS2O43462 519 aa27.07■■□□□ 1.92
PVT1-204ENST00000517525 NR1I2O75469 434 aa27.07■■□□□ 1.92
PVT1-204ENST00000517525 IL9P15248 144 aa27.07■■□□□ 1.92
PVT1-204ENST00000517525 LIG1P18858 919 aa27.07■■□□□ 1.92
PVT1-204ENST00000517525 PROZP22891 400 aa27.07■■□□□ 1.92
PVT1-204ENST00000517525 MARCKSP29966 332 aaPredicted RBP27.07■■□□□ 1.92
PVT1-204ENST00000517525 ZNF131P52739 623 aa27.07■■□□□ 1.92
PVT1-204ENST00000517525 EPSTI1Q96J88 318 aa27.07■■□□□ 1.92
PVT1-204ENST00000517525 SNTG2Q9NY99 539 aa27.07■■□□□ 1.92
PVT1-204ENST00000517525 SLC16A4O15374 487 aa27.06■■□□□ 1.92
PVT1-204ENST00000517525 LILRB3O75022 631 aa27.06■■□□□ 1.92
PVT1-204ENST00000517525 RECQL4O94761 1208 aa27.06■■□□□ 1.92
PVT1-204ENST00000517525 SRGAP2BP0DMP2 458 aa27.06■■□□□ 1.92
PVT1-204ENST00000517525 MAPTP10636 758 aaKnown RBP27.06■■□□□ 1.92
PVT1-204ENST00000517525 USP49Q70CQ1 688 aa27.06■■□□□ 1.92
PVT1-204ENST00000517525 GPBP1Q86WP2 473 aa27.06■■□□□ 1.92
PVT1-204ENST00000517525 GPR65Q8IYL9 337 aa27.06■■□□□ 1.92
PVT1-204ENST00000517525 LARP4BQ92615 738 aaKnown RBP27.06■■□□□ 1.92
PVT1-204ENST00000517525 COLEC11Q9BWP8 271 aa27.06■■□□□ 1.92
PVT1-204ENST00000517525 STK17AQ9UEE5 414 aa27.06■■□□□ 1.92
PVT1-204ENST00000517525 ABLIM1O14639 778 aa27.05■■□□□ 1.92
PVT1-204ENST00000517525 PTGESO14684 152 aa27.05■■□□□ 1.92
PVT1-204ENST00000517525 NCKAP1LP55160 1127 aa27.05■■□□□ 1.92
PVT1-204ENST00000517525 RAD51AP2Q09MP3 1159 aa27.05■■□□□ 1.92
PVT1-204ENST00000517525 KRI1Q8N9T8 703 aaKnown RBP27.05■■□□□ 1.92
PVT1-204ENST00000517525 RPS6KC1Q96S38 1066 aa27.05■■□□□ 1.92
PVT1-204ENST00000517525 REEP2Q9BRK0 252 aa27.05■■□□□ 1.92
PVT1-204ENST00000517525 KLK14Q9P0G3 267 aa27.05■■□□□ 1.92
PVT1-204ENST00000517525 CCDC39Q9UFE4 941 aa27.05■■□□□ 1.92
PVT1-204ENST00000517525 CLASP2O75122 1294 aaKnown RBP27.04■■□□□ 1.92
PVT1-204ENST00000517525 SOD2P04179 222 aa27.04■■□□□ 1.92
PVT1-204ENST00000517525 MCF2P10911 925 aa27.04■■□□□ 1.92
PVT1-204ENST00000517525 HOXB8P17481 243 aaPredicted RBP27.04■■□□□ 1.92
PVT1-204ENST00000517525 GRM5P41594 1212 aa27.04■■□□□ 1.92
PVT1-204ENST00000517525 OR1G1P47890 313 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms