RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 RARBP10826 455 aa10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 CTGFP29279 349 aa10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 FCGRTP55899 365 aa10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 KRT83P78385 493 aa10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 NCBP1Q09161 790 aaKnown RBP10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 ATF7IP2Q5U623 682 aa10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 MFSD14CQ5VZR4 134 aa10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 PHLDB3Q6NSJ2 640 aa10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 EPM2AIP1Q7L775 607 aaPredicted RBP10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 REXO1L1PQ8IX06 675 aa10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 FAM167AQ96KS9 214 aa10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 PCDHA13Q9Y5I0 950 aa10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 DNAJC25-GNG10A0A024R161 153 aa10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 FRMD3A2A2Y4 597 aa10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 KIF3CO14782 793 aa10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 ZNF185O15231 689 aa10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 TOMM70O94826 608 aa10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 CDH8P55286 799 aa10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 FSCN1Q16658 493 aaKnown RBP10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 WDR72Q3MJ13 1102 aa10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 CCDC181Q5TID7 509 aa10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 NFRKBQ6P4R8 1299 aa10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 SLC39A4Q6P5W5 647 aa10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 ALKBH5Q6P6C2 394 aaKnown RBP10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 PDXDC1Q6P996 788 aa10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 SEMA4DQ92854 862 aa10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 NT5C1BQ96P26 610 aa10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 MRPL4Q9BYD3 311 aaKnown RBP10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 USTQ9Y2C2 406 aa10.55□□□□□ -0.72
EFCAB13-203ENST00000517484 LRRIQ3A6PVS8 624 aaPredicted RBP10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 EIF3DO15371 548 aaKnown RBP eCLIP10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 CCP110O43303 1012 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 MAPTP10636 758 aaKnown RBP10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 RAP1GAPP47736 663 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 TFDP1Q14186 410 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 KCNV1Q6PIU1 500 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 TMEM139Q8IV31 216 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 LMBR1Q8WVP7 490 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 UBXN4Q92575 508 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 ERGIC2Q96RQ1 377 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 C1orf112Q9NSG2 853 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 ZMYM2Q9UBW7 1377 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 NFASCO94856 1347 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 RGPD3A6NKT7 1758 aaPredicted RBP10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 RGPD4Q7Z3J3 1758 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 A0A1W2PQC6 194 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 CTAGE9A4FU28 777 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 CCND3P30281 292 aaPredicted RBP10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 PBX1P40424 430 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 GTF2BQ00403 316 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 ELF2Q15723 593 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 DUSP28Q4G0W2 176 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 IER5Q5VY09 327 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 LLGL2Q6P1M3 1020 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 TAS1R3Q7RTX0 852 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 DHX33Q9H6R0 707 aaKnown RBP10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 KCND2Q9NZV8 630 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 CTTNBP2NLQ9P2B4 639 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 ADCY3O60266 1144 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 NOL4O94818 638 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 NPTXRO95502 500 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 MMP3P08254 477 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 EDNRBP24530 442 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 ICAM3P32942 547 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 ZNF131P52739 623 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 KRT39Q6A163 491 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 RDM1Q8NG50 284 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 PARD3BQ8TEW8 1205 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 TRIB2Q92519 343 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 SECISBP2LQ93073 1101 aaKnown RBP10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 CEP89Q96ST8 783 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 ADPGKQ9BRR6 497 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 RPF1Q9H9Y2 349 aaKnown RBP10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 VTA1Q9NP79 307 aa10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 ZC3H4Q9UPT8 1303 aaKnown RBP10.54□□□□□ -0.72
EFCAB13-203ENST00000517484 SLC15A5A6NIM6 579 aa10.53□□□□□ -0.72
EFCAB13-203ENST00000517484 MAFO75444 373 aaPredicted RBP10.53□□□□□ -0.72
EFCAB13-203ENST00000517484 SGPL1O95470 568 aa10.53□□□□□ -0.72
EFCAB13-203ENST00000517484 HLA-DRAP01903 254 aa10.53□□□□□ -0.72
EFCAB13-203ENST00000517484 NAMPTP43490 491 aa10.53□□□□□ -0.72
EFCAB13-203ENST00000517484 PHKA2P46019 1235 aa10.53□□□□□ -0.72
EFCAB13-203ENST00000517484 NOGQ13253 232 aa10.53□□□□□ -0.72
EFCAB13-203ENST00000517484 GRB14Q14449 540 aa10.53□□□□□ -0.72
EFCAB13-203ENST00000517484 USP37Q86T82 979 aa10.53□□□□□ -0.72
EFCAB13-203ENST00000517484 CPA5Q8WXQ8 436 aa10.53□□□□□ -0.72
EFCAB13-203ENST00000517484 XPNPEP3Q9NQH7 507 aa10.53□□□□□ -0.72
EFCAB13-203ENST00000517484 RAB20Q9NX57 234 aa10.53□□□□□ -0.72
EFCAB13-203ENST00000517484 CEP72Q9P209 647 aa10.53□□□□□ -0.72
EFCAB13-203ENST00000517484 CST3P01034 146 aaPredicted RBP10.53□□□□□ -0.72
EFCAB13-203ENST00000517484 IQCF3P0C7M6 154 aa10.53□□□□□ -0.72
EFCAB13-203ENST00000517484 SMIM10L2AP0DMW4 78 aa10.53□□□□□ -0.72
EFCAB13-203ENST00000517484 SMIM10L2BP0DMW5 78 aa10.53□□□□□ -0.72
EFCAB13-203ENST00000517484 THPOP40225 353 aa10.53□□□□□ -0.72
EFCAB13-203ENST00000517484 ZNF571Q7Z3V5 609 aaPredicted RBP10.53□□□□□ -0.72
EFCAB13-203ENST00000517484 SLC47A2Q86VL8 602 aa10.53□□□□□ -0.72
EFCAB13-203ENST00000517484 PALB2Q86YC2 1186 aa10.53□□□□□ -0.72
EFCAB13-203ENST00000517484 MAP4K3Q8IVH8 894 aa10.53□□□□□ -0.72
EFCAB13-203ENST00000517484 SAMD3Q8N6K7 520 aa10.53□□□□□ -0.72
EFCAB13-203ENST00000517484 ZNF784Q8NCA9 323 aaPredicted RBP10.53□□□□□ -0.72
EFCAB13-203ENST00000517484 FBXL13Q8NEE6 735 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms