RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 TUBB2BQ9BVA1 445 aa5.89□□□□□ -1.47
SCARNA20.4-201ENST00000516969 TARS2Q9BW92 718 aaKnown RBP5.89□□□□□ -1.47
SCARNA20.4-201ENST00000516969 IFIH1Q9BYX4 1025 aaKnown RBP5.89□□□□□ -1.47
SCARNA20.4-201ENST00000516969 C2orf40Q9H1Z8 148 aa5.89□□□□□ -1.47
SCARNA20.4-201ENST00000516969 FZD8Q9H461 694 aa5.89□□□□□ -1.47
SCARNA20.4-201ENST00000516969 TUT1Q9H6E5 874 aaKnown RBP5.89□□□□□ -1.47
SCARNA20.4-201ENST00000516969 SUGCTQ9HAC7 445 aa5.89□□□□□ -1.47
SCARNA20.4-201ENST00000516969 PTPRHQ9HD43 1115 aa5.89□□□□□ -1.47
SCARNA20.4-201ENST00000516969 APEX2Q9UBZ4 518 aa5.89□□□□□ -1.47
SCARNA20.4-201ENST00000516969 TRIM10Q9UDY6 481 aa5.89□□□□□ -1.47
SCARNA20.4-201ENST00000516969 DNAJC12Q9UKB3 198 aa5.89□□□□□ -1.47
SCARNA20.4-201ENST00000516969 AGO2Q9UKV8 859 aaKnown RBP5.89□□□□□ -1.47
SCARNA20.4-201ENST00000516969 GUCA1BQ9UMX6 200 aa5.89□□□□□ -1.47
SCARNA20.4-201ENST00000516969 TFR2Q9UP52 801 aa5.89□□□□□ -1.47
SCARNA20.4-201ENST00000516969 TRPC6Q9Y210 931 aa5.89□□□□□ -1.47
SCARNA20.4-201ENST00000516969 Q9Y3F1 56 aa5.89□□□□□ -1.47
SCARNA20.4-201ENST00000516969 DUSP10Q9Y6W6 482 aa5.89□□□□□ -1.47
SCARNA20.4-201ENST00000516969 ATP8B3O60423 1300 aa5.89□□□□□ -1.47
SCARNA20.4-201ENST00000516969 SCN10AQ9Y5Y9 1956 aa5.89□□□□□ -1.47
SCARNA20.4-201ENST00000516969 A0A087X0T9 212 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 CTAGE9A4FU28 777 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 BTNL10A8MVZ5 291 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 FOXN3O00409 490 aaPredicted RBP5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 ACKR2O00590 384 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 EVI5O60447 810 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 ZC3H11AO75152 810 aaKnown RBP eCLIP5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 LRRN2O75325 713 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 TOM1L1O75674 476 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 IPO7O95373 1038 aaKnown RBP5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 IQCF3P0C7M6 154 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 FAM228BP0C875 321 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 ZNF286BP0CG31 522 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 FERP16591 822 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 CTGFP29279 349 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 RGS2P41220 211 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 MAGEA1P43355 309 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 ACOT2P49753 483 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 MXI1P50539 228 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 CLCN3P51790 818 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 WNT7BP56706 349 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 NLRP11P59045 1033 aaKnown RBP5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 AMPD2Q01433 879 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 GFPT1Q06210 699 aaPredicted RBP5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 MCL1Q07820 350 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 KIF5AQ12840 1032 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 GRM1Q13255 1194 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 CRHR2Q13324 411 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 PRPF4BQ13523 1007 aaKnown RBP5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 TFDP1Q14186 410 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 KIF22Q14807 665 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 NAB2Q15742 525 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 CCL14Q16627 93 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 MAPK6Q16659 721 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 ZACNQ401N2 412 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 PRAMEF19Q5SWL8 479 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 CCDC122Q5T0U0 273 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 MTHFD1LQ6UB35 978 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 SV2AQ7L0J3 742 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 RHPN2Q8IUC4 686 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 ARHGEF19Q8IW93 802 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 ZBTB8OSQ8IWT0 167 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 FAM71AQ8IYT1 594 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 SLC35F6Q8N357 371 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 RNF10Q8N5U6 811 aaKnown RBP5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 METTL13Q8N6R0 699 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 RNF149Q8NC42 400 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 SMC1BQ8NDV3 1235 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 FBXL13Q8NEE6 735 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 OR6J1Q8NGC5 347 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 HELQQ8TDG4 1101 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 SOCS4Q8WXH5 440 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 KAT2BQ92831 832 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 CCDC127Q96BQ5 260 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 ZIC5Q96T25 663 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 MRPL4Q9BYD3 311 aaKnown RBP5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 DEF6Q9H4E7 631 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 IFT122Q9HBG6 1241 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 UBE2TQ9NPD8 197 aaPredicted RBP5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 RAB20Q9NX57 234 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 ADAMTS1Q9UHI8 967 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 ZHX1Q9UKY1 873 aaPredicted RBP5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 ZNF215Q9UL58 517 aaPredicted RBP5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 MRFAP1Q9Y605 127 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 CNTNAP2Q9UHC6 1331 aa5.88□□□□□ -1.47
SCARNA20.4-201ENST00000516969 PCNTO95613 3336 aa5.87□□□□□ -1.47
SCARNA20.4-201ENST00000516969 MBLAC1A4D2B0 266 aaPredicted RBP5.87□□□□□ -1.47
SCARNA20.4-201ENST00000516969 RRN3P2A6NIE6 340 aa5.87□□□□□ -1.47
SCARNA20.4-201ENST00000516969 TMEM88BA6NKF7 163 aa5.87□□□□□ -1.47
SCARNA20.4-201ENST00000516969 HAS3O00219 553 aa5.87□□□□□ -1.47
SCARNA20.4-201ENST00000516969 DDX3XO00571 662 aaKnown RBP eCLIP5.87□□□□□ -1.47
SCARNA20.4-201ENST00000516969 OGTO15294 1046 aa5.87□□□□□ -1.47
SCARNA20.4-201ENST00000516969 CLDN3O15551 220 aa5.87□□□□□ -1.47
SCARNA20.4-201ENST00000516969 DYNC1LI2O43237 492 aaPredicted RBP5.87□□□□□ -1.47
SCARNA20.4-201ENST00000516969 URI1O94763 535 aaPredicted RBP5.87□□□□□ -1.47
SCARNA20.4-201ENST00000516969 SLU7O95391 586 aaKnown RBP5.87□□□□□ -1.47
SCARNA20.4-201ENST00000516969 VNN1O95497 513 aa5.87□□□□□ -1.47
SCARNA20.4-201ENST00000516969 F2P00734 622 aa5.87□□□□□ -1.47
SCARNA20.4-201ENST00000516969 PRKCBP05771 671 aa5.87□□□□□ -1.47
SCARNA20.4-201ENST00000516969 GJB1P08034 283 aa5.87□□□□□ -1.47
SCARNA20.4-201ENST00000516969 CCDC172P0C7W6 258 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms