RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 HYPKQ9NX55 129 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 TSPYL4Q9UJ04 414 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 PPM1HQ9ULR3 514 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 SLC5A6Q9Y289 635 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 PCDHB7Q9Y5E2 793 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 MYLKQ15746 1914 aa3.85□□□□□ -1.79
SCARNA13-201ENST00000516672 CARNS1A5YM72 827 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 H7C1W4 665 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 DXOO77932 396 aaKnown RBP3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 IGKV5-2P06315 115 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 CNPP09543 421 aaKnown RBP3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 LPOP22079 712 aaPredicted RBP3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 GDI1P31150 447 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 MEOX1P50221 254 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 GABREP78334 506 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 GRIK2Q13002 908 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 IFIT5Q13325 482 aaKnown RBP3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 MORC3Q14149 939 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 GCKRQ14397 625 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 PPP2R5BQ15173 497 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 KIZQ2M2Z5 673 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 PLEKHG6Q3KR16 790 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 TATDN1Q6P1N9 297 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 C1orf228Q6PIY5 440 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 ELMSAN1Q6PJG2 1045 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 DBX2Q6ZNG2 339 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 LRRC55Q6ZSA7 311 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 UBE3BQ7Z3V4 1068 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 GRASPQ7Z6J2 395 aaPredicted RBP3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 SPICE1Q8N0Z3 855 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 CCDC82Q8N4S0 544 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 ITFG1Q8TB96 612 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 NINJ1Q92982 152 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 ATP6V0A1Q93050 837 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 CCDC97Q96F63 343 aaPredicted RBP3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 MSANTD3Q96H12 275 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 FNBP1Q96RU3 617 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 KATNAL1Q9BW62 490 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 EMILIN2Q9BXX0 1053 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 THSD1Q9NS62 852 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 AKAP2Q9Y2D5 859 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 FPGT-TNNI3KV9GXZ4 949 aa3.84□□□□□ -1.79
SCARNA13-201ENST00000516672 LRP4O75096 1905 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 GREB1LQ9C091 1923 aaPredicted RBP3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 CROCCQ5TZA2 2017 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 TRRAPQ9Y4A5 3859 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 GPR75-ASB3A0A0A6YYF3 556 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 RBM47A0AV96 593 aaKnown RBP3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 PTPDC1A2A3K4 754 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 SLC38A8A6NNN8 435 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 NT5C1B-RDH14C9J2C7 533 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 INAFM1C9JVW0 142 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 NKRFO15226 690 aaKnown RBP eCLIP3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 ANP32CO43423 234 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 SORBS3O60504 671 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 RFPL3O75679 317 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 CHRNA1P02708 482 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 ITGB3P05106 788 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 SPATA31D3P0C874 917 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 CASTP20810 708 aaKnown RBP3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 KPNA1P52294 538 aaPredicted RBP3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 MLLT6P55198 1093 aaPredicted RBP3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 POLE2P56282 527 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 CYP4F2P78329 520 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 KLRB1Q12918 225 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 PDCD2Q16342 344 aaPredicted RBP3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 HMBOX1Q6NT76 420 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 SPATA31D4Q6ZUB0 917 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 NOSTRINQ8IVI9 506 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 NPAS3Q8IXF0 933 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 ZNF295-AS1Q8N0V1 137 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 FRMD1Q8N878 549 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 ENGASEQ8NFI3 743 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 FAM200AQ8TCP9 573 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 OXER1Q8TDS5 423 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 ELSPBP1Q96BH3 223 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 ADAM2Q99965 735 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 PRKD2Q9BZL6 878 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 CXXC4Q9H2H0 198 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 DHX36Q9H2U1 1008 aaKnown RBP3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 ASCL3Q9NQ33 180 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 CHST12Q9NRB3 414 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 DPP7Q9UHL4 492 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 TUBD1Q9UJT1 453 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 CIZ1Q9ULV3 898 aaPredicted RBP3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 PCDHB1Q9Y5F3 818 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 PCDHGA1Q9Y5H4 931 aa3.83□□□□□ -1.8
SCARNA13-201ENST00000516672 ZANQ9Y493 2812 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 NOTCH4Q99466 2003 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 C17orf102A2RUQ5 167 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 SPECC1L-ADORA2AF8WAN1 911 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 HAS3O00219 553 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 CILPO75339 1184 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 MAP4K4O95819 1239 aaPredicted RBP3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 INHBBP09529 407 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 ZNF883P0CG24 379 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 ZNF286BP0CG31 522 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 COX6B1P14854 86 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 SSTR2P30874 369 aa3.82□□□□□ -1.8
SCARNA13-201ENST00000516672 CD52P31358 61 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms