RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 EFCAB12Q6NXP0 572 aa3.69□□□□□ -1.82
SCARNA16.2-201ENST00000516520 CCDC62Q6P9F0 684 aa3.69□□□□□ -1.82
SCARNA16.2-201ENST00000516520 RASSF3Q86WH2 238 aa3.69□□□□□ -1.82
SCARNA16.2-201ENST00000516520 PRIMA1Q86XR5 153 aa3.69□□□□□ -1.82
SCARNA16.2-201ENST00000516520 XYLT1Q86Y38 959 aa3.69□□□□□ -1.82
SCARNA16.2-201ENST00000516520 SLC41A1Q8IVJ1 513 aa3.69□□□□□ -1.82
SCARNA16.2-201ENST00000516520 ARHGEF19Q8IW93 802 aa3.69□□□□□ -1.82
SCARNA16.2-201ENST00000516520 LILRA3Q8N6C8 439 aaPredicted RBP3.69□□□□□ -1.82
SCARNA16.2-201ENST00000516520 OR10H5Q8NGA6 315 aa3.69□□□□□ -1.82
SCARNA16.2-201ENST00000516520 ZNF480Q8WV37 535 aa3.69□□□□□ -1.82
SCARNA16.2-201ENST00000516520 SNX33Q8WV41 574 aa3.69□□□□□ -1.82
SCARNA16.2-201ENST00000516520 ANO3Q9BYT9 981 aa3.69□□□□□ -1.82
SCARNA16.2-201ENST00000516520 MS4A5Q9H3V2 200 aa3.69□□□□□ -1.82
SCARNA16.2-201ENST00000516520 RIOX1Q9H6W3 641 aa3.69□□□□□ -1.82
SCARNA16.2-201ENST00000516520 AKIP1Q9NQ31 210 aa3.69□□□□□ -1.82
SCARNA16.2-201ENST00000516520 ZNHIT2Q9UHR6 403 aa3.69□□□□□ -1.82
SCARNA16.2-201ENST00000516520 NOC2LQ9Y3T9 749 aaKnown RBP3.69□□□□□ -1.82
SCARNA16.2-201ENST00000516520 CHST2Q9Y4C5 530 aa3.69□□□□□ -1.82
SCARNA16.2-201ENST00000516520 LCHNA4D1U4 455 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 ZAR1LA6NP61 321 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 TBKBP1A7MCY6 615 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 GSG1L2A8MUP6 293 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 PHF2O75151 1096 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 TMEM127O75204 238 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 ITGA10O75578 1167 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 NCR1O76036 304 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 CLEC2LP0C7M8 214 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 ZSCAN20P17040 1043 aaPredicted RBP3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 TGM1P22735 817 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 CRHR1P34998 444 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 ZEB1P37275 1124 aaPredicted RBP3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 RNASE9P60153 205 aaKnown RBP3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 BEAN1Q3B7T3 259 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 ATP13A4Q4VNC1 1196 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 STRIP1Q5VSL9 837 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 ARMC6Q6NXE6 501 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 Q6YL49 198 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 KIAA0907Q7Z7F0 614 aaPredicted RBP3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 LCORLQ8N3X6 602 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 BEND2Q8NDZ0 799 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 ZFP28Q8NHY6 868 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 TFAP2CQ92754 450 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 USP7Q93009 1102 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 COQ10AQ96MF6 247 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 ACAP3Q96P50 834 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 KCTD10Q9H3F6 313 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 SERHL2Q9H4I8 314 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 GPRC5DQ9NZD1 345 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 POGKQ9P215 609 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 MAPRE3Q9UPY8 281 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 PCSK5Q92824 1860 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 COL4A3Q01955 1670 aa3.68□□□□□ -1.82
SCARNA16.2-201ENST00000516520 LEFTY2O00292 366 aa3.67□□□□□ -1.82
SCARNA16.2-201ENST00000516520 ULK1O75385 1050 aa3.67□□□□□ -1.82
SCARNA16.2-201ENST00000516520 CTSSP25774 331 aa3.67□□□□□ -1.82
SCARNA16.2-201ENST00000516520 FLT3LGP49771 235 aa3.67□□□□□ -1.82
SCARNA16.2-201ENST00000516520 SESN3P58005 492 aa3.67□□□□□ -1.82
SCARNA16.2-201ENST00000516520 FAM189BP81408 668 aa3.67□□□□□ -1.82
SCARNA16.2-201ENST00000516520 GUCY1B3Q02153 619 aa3.67□□□□□ -1.82
SCARNA16.2-201ENST00000516520 TRIM25Q14258 630 aaKnown RBP3.67□□□□□ -1.82
SCARNA16.2-201ENST00000516520 DHCR24Q15392 516 aa3.67□□□□□ -1.82
SCARNA16.2-201ENST00000516520 ERCC6LQ2NKX8 1250 aa3.67□□□□□ -1.82
SCARNA16.2-201ENST00000516520 PITRM1Q5JRX3 1037 aa3.67□□□□□ -1.82
SCARNA16.2-201ENST00000516520 ABHD15Q6UXT9 468 aa3.67□□□□□ -1.82
SCARNA16.2-201ENST00000516520 LYSMD2Q8IV50 215 aa3.67□□□□□ -1.82
SCARNA16.2-201ENST00000516520 GPR150Q8NGU9 434 aa3.67□□□□□ -1.82
SCARNA16.2-201ENST00000516520 LEO1Q8WVC0 666 aaPredicted RBP3.67□□□□□ -1.82
SCARNA16.2-201ENST00000516520 RAX2Q96IS3 184 aa3.67□□□□□ -1.82
SCARNA16.2-201ENST00000516520 WDR11Q9BZH6 1224 aa3.67□□□□□ -1.82
SCARNA16.2-201ENST00000516520 PTGFRNQ9P2B2 879 aa3.67□□□□□ -1.82
SCARNA16.2-201ENST00000516520 MRPL42Q9Y6G3 142 aaKnown RBP3.67□□□□□ -1.82
SCARNA16.2-201ENST00000516520 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.66□□□□□ -1.82
SCARNA16.2-201ENST00000516520 PJA2O43164 708 aa3.66□□□□□ -1.82
SCARNA16.2-201ENST00000516520 PDE8AO60658 829 aa3.66□□□□□ -1.82
SCARNA16.2-201ENST00000516520 LPXNO60711 386 aa3.66□□□□□ -1.82
SCARNA16.2-201ENST00000516520 NDUFA10O95299 355 aa3.66□□□□□ -1.82
SCARNA16.2-201ENST00000516520 HKR1P10072 659 aa3.66□□□□□ -1.82
SCARNA16.2-201ENST00000516520 BPIP17213 487 aa3.66□□□□□ -1.82
SCARNA16.2-201ENST00000516520 DDX6P26196 483 aaKnown RBP eCLIP3.66□□□□□ -1.82
SCARNA16.2-201ENST00000516520 LGALS4P56470 323 aa3.66□□□□□ -1.82
SCARNA16.2-201ENST00000516520 KRTAP1-1Q07627 177 aa3.66□□□□□ -1.82
SCARNA16.2-201ENST00000516520 FSCN1Q16658 493 aaKnown RBP3.66□□□□□ -1.82
SCARNA16.2-201ENST00000516520 UGT8Q16880 541 aa3.66□□□□□ -1.82
SCARNA16.2-201ENST00000516520 BMT2Q1RMZ1 405 aa3.66□□□□□ -1.82
SCARNA16.2-201ENST00000516520 FAM180AQ6UWF9 173 aa3.66□□□□□ -1.82
SCARNA16.2-201ENST00000516520 BTNL9Q6UXG8 535 aa3.66□□□□□ -1.82
SCARNA16.2-201ENST00000516520 JAZF1Q86VZ6 243 aa3.66□□□□□ -1.82
SCARNA16.2-201ENST00000516520 CPEB3Q8NE35 698 aaKnown RBP3.66□□□□□ -1.82
SCARNA16.2-201ENST00000516520 MDM1Q8TC05 714 aa3.66□□□□□ -1.82
SCARNA16.2-201ENST00000516520 VOPP1Q96AW1 172 aa3.66□□□□□ -1.82
SCARNA16.2-201ENST00000516520 ZNF764Q96H86 408 aaPredicted RBP3.66□□□□□ -1.82
SCARNA16.2-201ENST00000516520 IFT22Q9H7X7 185 aa3.66□□□□□ -1.82
SCARNA16.2-201ENST00000516520 ANKFY1Q9P2R3 1169 aa3.66□□□□□ -1.82
SCARNA16.2-201ENST00000516520 DKK2Q9UBU2 259 aa3.66□□□□□ -1.82
SCARNA16.2-201ENST00000516520 APOBEC2Q9Y235 224 aaKnown RBP3.66□□□□□ -1.82
SCARNA16.2-201ENST00000516520 RPTORQ8N122 1335 aa3.66□□□□□ -1.82
SCARNA16.2-201ENST00000516520 ZMYM3Q14202 1370 aa3.65□□□□□ -1.82
SCARNA16.2-201ENST00000516520 A0A087X0B3 334 aa3.65□□□□□ -1.83
SCARNA16.2-201ENST00000516520 ENPP3O14638 875 aa3.65□□□□□ -1.83
SCARNA16.2-201ENST00000516520 ZEB2O60315 1214 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms