RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 PRSS50Q9UI38 385 aa4.49□□□□□ -1.69
HERC4-215ENST00000515753 KCNG1Q9UIX4 513 aa4.49□□□□□ -1.69
HERC4-215ENST00000515753 MCM8Q9UJA3 840 aa4.49□□□□□ -1.69
HERC4-215ENST00000515753 CDY2AQ9Y6F7 541 aa4.49□□□□□ -1.69
HERC4-215ENST00000515753 A0A1W2PR48 441 aa4.48□□□□□ -1.69
HERC4-215ENST00000515753 LCHNA4D1U4 455 aa4.48□□□□□ -1.69
HERC4-215ENST00000515753 LY86O95711 162 aa4.48□□□□□ -1.69
HERC4-215ENST00000515753 CFBP00751 764 aa4.48□□□□□ -1.69
HERC4-215ENST00000515753 ZFP36P26651 326 aaKnown RBP4.48□□□□□ -1.69
HERC4-215ENST00000515753 CNGA1P29973 690 aa4.48□□□□□ -1.69
HERC4-215ENST00000515753 MRPS9P82933 396 aaKnown RBP4.48□□□□□ -1.69
HERC4-215ENST00000515753 GJC2Q5T442 439 aaPredicted RBP4.48□□□□□ -1.69
HERC4-215ENST00000515753 LRRC55Q6ZSA7 311 aa4.48□□□□□ -1.69
HERC4-215ENST00000515753 BEND2Q8NDZ0 799 aa4.48□□□□□ -1.69
HERC4-215ENST00000515753 PIK3C3Q8NEB9 887 aa4.48□□□□□ -1.69
HERC4-215ENST00000515753 WDR66Q8TBY9 1149 aa4.48□□□□□ -1.69
HERC4-215ENST00000515753 NTN5Q8WTR8 489 aaPredicted RBP4.48□□□□□ -1.69
HERC4-215ENST00000515753 LMBR1Q8WVP7 490 aa4.48□□□□□ -1.69
HERC4-215ENST00000515753 GAB3Q8WWW8 586 aa4.48□□□□□ -1.69
HERC4-215ENST00000515753 RAX2Q96IS3 184 aa4.48□□□□□ -1.69
HERC4-215ENST00000515753 ENKD1Q9H0I2 346 aa4.48□□□□□ -1.69
HERC4-215ENST00000515753 KCTD10Q9H3F6 313 aa4.48□□□□□ -1.69
HERC4-215ENST00000515753 ING3Q9NXR8 418 aa4.48□□□□□ -1.69
HERC4-215ENST00000515753 PHLDB1Q86UU1 1377 aa4.48□□□□□ -1.69
HERC4-215ENST00000515753 SBNO2Q9Y2G9 1366 aa4.48□□□□□ -1.69
HERC4-215ENST00000515753 COL4A3Q01955 1670 aa4.48□□□□□ -1.69
HERC4-215ENST00000515753 MASP2O00187 686 aa4.47□□□□□ -1.69
HERC4-215ENST00000515753 LPXNO60711 386 aa4.47□□□□□ -1.69
HERC4-215ENST00000515753 XPAP23025 273 aaPredicted RBP4.47□□□□□ -1.69
HERC4-215ENST00000515753 ERVK-21P61565 698 aa4.47□□□□□ -1.69
HERC4-215ENST00000515753 PPARAQ07869 468 aa4.47□□□□□ -1.69
HERC4-215ENST00000515753 TRIM25Q14258 630 aaKnown RBP4.47□□□□□ -1.69
HERC4-215ENST00000515753 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.47□□□□□ -1.69
HERC4-215ENST00000515753 TIGD2Q4W5G0 525 aa4.47□□□□□ -1.69
HERC4-215ENST00000515753 HECTD2Q5U5R9 776 aa4.47□□□□□ -1.69
HERC4-215ENST00000515753 CCDC62Q6P9F0 684 aa4.47□□□□□ -1.69
HERC4-215ENST00000515753 TAS1R1Q7RTX1 841 aa4.47□□□□□ -1.69
HERC4-215ENST00000515753 FAM193BQ96PV7 902 aaPredicted RBP4.47□□□□□ -1.69
HERC4-215ENST00000515753 UIMC1Q96RL1 719 aa4.47□□□□□ -1.69
HERC4-215ENST00000515753 EPC1Q9H2F5 836 aa4.47□□□□□ -1.69
HERC4-215ENST00000515753 EVLQ9UI08 416 aaPredicted RBP4.47□□□□□ -1.69
HERC4-215ENST00000515753 HS3ST4Q9Y661 456 aa4.47□□□□□ -1.69
HERC4-215ENST00000515753 POLR2AP24928 1970 aaKnown RBP4.46□□□□□ -1.7
HERC4-215ENST00000515753 ZAR1LA6NP61 321 aa4.46□□□□□ -1.7
HERC4-215ENST00000515753 KIAA0355O15063 1070 aa4.46□□□□□ -1.7
HERC4-215ENST00000515753 B3GALT2O43825 422 aa4.46□□□□□ -1.7
HERC4-215ENST00000515753 PRKD3O94806 890 aa4.46□□□□□ -1.7
HERC4-215ENST00000515753 MTHFD2P13995 350 aa4.46□□□□□ -1.7
HERC4-215ENST00000515753 FBLP22087 321 aaKnown RBP4.46□□□□□ -1.7
HERC4-215ENST00000515753 FAM189BP81408 668 aa4.46□□□□□ -1.7
HERC4-215ENST00000515753 TMPRSS15P98073 1019 aa4.46□□□□□ -1.7
HERC4-215ENST00000515753 UGT8Q16880 541 aa4.46□□□□□ -1.7
HERC4-215ENST00000515753 ANO4Q32M45 955 aa4.46□□□□□ -1.7
HERC4-215ENST00000515753 C19orf54Q5BKX5 351 aa4.46□□□□□ -1.7
HERC4-215ENST00000515753 NAIF1Q69YI7 327 aaPredicted RBP4.46□□□□□ -1.7
HERC4-215ENST00000515753 IQSEC1Q6DN90 963 aa4.46□□□□□ -1.7
HERC4-215ENST00000515753 OLFML1Q6UWY5 402 aa4.46□□□□□ -1.7
HERC4-215ENST00000515753 LMBR1LQ6UX01 489 aa4.46□□□□□ -1.7
HERC4-215ENST00000515753 LHFPL2Q6ZUX7 228 aa4.46□□□□□ -1.7
HERC4-215ENST00000515753 SSH1Q8WYL5 1049 aa4.46□□□□□ -1.7
HERC4-215ENST00000515753 ZNF764Q96H86 408 aaPredicted RBP4.46□□□□□ -1.7
HERC4-215ENST00000515753 CPPED1Q9BRF8 314 aaPredicted RBP4.46□□□□□ -1.7
HERC4-215ENST00000515753 FAM126AQ9BYI3 521 aaPredicted RBP4.46□□□□□ -1.7
HERC4-215ENST00000515753 BRINP2Q9C0B6 783 aa4.46□□□□□ -1.7
HERC4-215ENST00000515753 PUS7LQ9H0K6 701 aaKnown RBP4.46□□□□□ -1.7
HERC4-215ENST00000515753 PRDM12Q9H4Q4 367 aa4.46□□□□□ -1.7
HERC4-215ENST00000515753 WDR26Q9H7D7 661 aa4.46□□□□□ -1.7
HERC4-215ENST00000515753 EIF2B4Q9UI10 523 aaKnown RBP4.46□□□□□ -1.7
HERC4-215ENST00000515753 ATP8A1Q9Y2Q0 1164 aa4.46□□□□□ -1.7
HERC4-215ENST00000515753 CENPVL1A0A0U1RR11 272 aa4.45□□□□□ -1.7
HERC4-215ENST00000515753 TRIM75PA6NK02 468 aa4.45□□□□□ -1.7
HERC4-215ENST00000515753 AHRRA9YTQ3 701 aa4.45□□□□□ -1.7
HERC4-215ENST00000515753 HOXA3O43365 443 aaPredicted RBP4.45□□□□□ -1.7
HERC4-215ENST00000515753 TMEM127O75204 238 aa4.45□□□□□ -1.7
HERC4-215ENST00000515753 ALDH1A2O94788 518 aa4.45□□□□□ -1.7
HERC4-215ENST00000515753 LTA4HP09960 611 aaKnown RBP4.45□□□□□ -1.7
HERC4-215ENST00000515753 CLEC2LP0C7M8 214 aa4.45□□□□□ -1.7
HERC4-215ENST00000515753 NCLP19338 710 aaKnown RBP4.45□□□□□ -1.7
HERC4-215ENST00000515753 CD69Q07108 199 aa4.45□□□□□ -1.7
HERC4-215ENST00000515753 CSRP2Q16527 193 aa4.45□□□□□ -1.7
HERC4-215ENST00000515753 KCNK18Q7Z418 384 aa4.45□□□□□ -1.7
HERC4-215ENST00000515753 APBB1IPQ7Z5R6 666 aaPredicted RBP4.45□□□□□ -1.7
HERC4-215ENST00000515753 AUTS2Q8WXX7 1259 aa4.45□□□□□ -1.7
HERC4-215ENST00000515753 BBC3Q96PG8 261 aaPredicted RBP4.45□□□□□ -1.7
HERC4-215ENST00000515753 ANO3Q9BYT9 981 aa4.45□□□□□ -1.7
HERC4-215ENST00000515753 SYNPO2LQ9H987 977 aa4.45□□□□□ -1.7
HERC4-215ENST00000515753 CYP4F11Q9HBI6 524 aa4.45□□□□□ -1.7
HERC4-215ENST00000515753 ANKFY1Q9P2R3 1169 aa4.45□□□□□ -1.7
HERC4-215ENST00000515753 USP18Q9UMW8 372 aa4.45□□□□□ -1.7
HERC4-215ENST00000515753 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.45□□□□□ -1.7
HERC4-215ENST00000515753 RECQL4O94761 1208 aa4.44□□□□□ -1.7
HERC4-215ENST00000515753 LAG3P18627 525 aa4.44□□□□□ -1.7
HERC4-215ENST00000515753 APOBEC3AP31941 199 aaPredicted RBP4.44□□□□□ -1.7
HERC4-215ENST00000515753 CASRP41180 1078 aa4.44□□□□□ -1.7
HERC4-215ENST00000515753 LGALS4P56470 323 aa4.44□□□□□ -1.7
HERC4-215ENST00000515753 KRT85P78386 507 aa4.44□□□□□ -1.7
HERC4-215ENST00000515753 MGAT5Q09328 741 aa4.44□□□□□ -1.7
HERC4-215ENST00000515753 MUM1Q2TAK8 710 aa4.44□□□□□ -1.7
HERC4-215ENST00000515753 CT83Q5H943 113 aa4.44□□□□□ -1.7
HERC4-215ENST00000515753 DCAF17Q5H9S7 520 aaPredicted RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms