RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 ZNF280BQ86YH2 543 aa14.05□□□□□ -0.16
CLCN3-210ENST00000515420 EFHBQ8N7U6 833 aa14.05□□□□□ -0.16
CLCN3-210ENST00000515420 TMEM161BQ8NDZ6 487 aa14.05□□□□□ -0.16
CLCN3-210ENST00000515420 MICAL1Q8TDZ2 1067 aa14.05□□□□□ -0.16
CLCN3-210ENST00000515420 CLIC6Q96NY7 704 aa14.05□□□□□ -0.16
CLCN3-210ENST00000515420 ACO2Q99798 780 aaKnown RBP14.05□□□□□ -0.16
CLCN3-210ENST00000515420 REEP2Q9BRK0 252 aa14.05□□□□□ -0.16
CLCN3-210ENST00000515420 DNAJB4Q9UDY4 337 aa14.05□□□□□ -0.16
CLCN3-210ENST00000515420 IRAK3Q9Y616 596 aa14.05□□□□□ -0.16
CLCN3-210ENST00000515420 NCOR1O75376 2440 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 CITO14578 2027 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 SFI1A8K8P3 1242 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 SLC16A4O15374 487 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 NR1I2O75469 434 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 DDHD2O94830 711 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 BRD1O95696 1058 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 POMCP01189 267 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 ALDH2P05091 517 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 MAPTP10636 758 aaKnown RBP14.04□□□□□ -0.16
CLCN3-210ENST00000515420 BMP1P13497 986 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 LIG1P18858 919 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 SLC11A1P49279 550 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 SCNN1GP51170 649 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 AFF1P51825 1210 aaKnown RBP14.04□□□□□ -0.16
CLCN3-210ENST00000515420 ERVFC1P60507 584 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 STRN3Q13033 797 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 ADAM15Q13444 863 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 GIT2Q14161 759 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 SMC1AQ14683 1233 aaKnown RBP14.04□□□□□ -0.16
CLCN3-210ENST00000515420 SPECC1Q5M775 1068 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 RRAGBQ5VZM2 374 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 EEF1DP3Q658K8 133 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 CCDC73Q6ZRK6 1079 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 ADGRD2Q7Z7M1 963 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 COLGALT2Q8IYK4 626 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 GSTCDQ8NEC7 633 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 KCNG4Q8TDN1 519 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 ZFP42Q96MM3 310 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 RPS6KC1Q96S38 1066 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 TCF25Q9BQ70 676 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 APOL6Q9BWW8 343 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 COL25A1Q9BXS0 654 aaPredicted RBP14.04□□□□□ -0.16
CLCN3-210ENST00000515420 GBP3Q9H0R5 595 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 PARVGQ9HBI0 331 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 PTPRHQ9HD43 1115 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 ENTPD7Q9NQZ7 604 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 CLDND1Q9NY35 253 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 PARP2Q9UGN5 583 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 FAN1Q9Y2M0 1017 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 CUL9Q8IWT3 2517 aa14.04□□□□□ -0.16
CLCN3-210ENST00000515420 TRIP11Q15643 1979 aa14.03□□□□□ -0.16
CLCN3-210ENST00000515420 SPTBN5Q9NRC6 3674 aaKnown RBP14.03□□□□□ -0.16
CLCN3-210ENST00000515420 NT5C1B-RDH14C9J2C7 533 aa14.03□□□□□ -0.16
CLCN3-210ENST00000515420 DLL1O00548 723 aa14.03□□□□□ -0.16
CLCN3-210ENST00000515420 B4GALT3O60512 393 aa14.03□□□□□ -0.16
CLCN3-210ENST00000515420 CUTAO60888 179 aa14.03□□□□□ -0.16
CLCN3-210ENST00000515420 TBCAO75347 108 aaKnown RBP14.03□□□□□ -0.16
CLCN3-210ENST00000515420 FAM13AO94988 1023 aa14.03□□□□□ -0.16
CLCN3-210ENST00000515420 KRT18P05783 430 aaKnown RBP14.03□□□□□ -0.16
CLCN3-210ENST00000515420 KCNA5P22460 613 aa14.03□□□□□ -0.16
CLCN3-210ENST00000515420 PROZP22891 400 aa14.03□□□□□ -0.16
CLCN3-210ENST00000515420 AKAP5P24588 427 aa14.03□□□□□ -0.16
CLCN3-210ENST00000515420 KCNQ1P51787 676 aa14.03□□□□□ -0.16
CLCN3-210ENST00000515420 DUSP6Q16828 381 aa14.03□□□□□ -0.16
CLCN3-210ENST00000515420 ZPBP2Q6X784 338 aa14.03□□□□□ -0.16
CLCN3-210ENST00000515420 TMC7Q7Z402 723 aa14.03□□□□□ -0.16
CLCN3-210ENST00000515420 TMEM173Q86WV6 379 aaPredicted RBP14.03□□□□□ -0.16
CLCN3-210ENST00000515420 ZBP1Q9H171 429 aa14.03□□□□□ -0.16
CLCN3-210ENST00000515420 TLE6Q9H808 572 aa14.03□□□□□ -0.16
CLCN3-210ENST00000515420 CFAP45Q9UL16 551 aa14.03□□□□□ -0.16
CLCN3-210ENST00000515420 FAM50BQ9Y247 325 aa14.03□□□□□ -0.16
CLCN3-210ENST00000515420 TTC28Q96AY4 2481 aa14.03□□□□□ -0.16
CLCN3-210ENST00000515420 TCF20Q9UGU0 1960 aaKnown RBP14.02□□□□□ -0.16
CLCN3-210ENST00000515420 NPHP3-ACAD11A0A0J9YXS1 232 aa14.02□□□□□ -0.17
CLCN3-210ENST00000515420 ABLIM1O14639 778 aa14.02□□□□□ -0.17
CLCN3-210ENST00000515420 NRP1O14786 923 aa14.02□□□□□ -0.17
CLCN3-210ENST00000515420 TRAK2O60296 914 aa14.02□□□□□ -0.17
CLCN3-210ENST00000515420 TOM1L1O75674 476 aa14.02□□□□□ -0.17
CLCN3-210ENST00000515420 RECQL4O94761 1208 aa14.02□□□□□ -0.17
CLCN3-210ENST00000515420 SRGAP2BP0DMP2 458 aa14.02□□□□□ -0.17
CLCN3-210ENST00000515420 CTSAP10619 480 aa14.02□□□□□ -0.17
CLCN3-210ENST00000515420 MCF2P10911 925 aa14.02□□□□□ -0.17
CLCN3-210ENST00000515420 LTBRP36941 435 aa14.02□□□□□ -0.17
CLCN3-210ENST00000515420 GRM5P41594 1212 aa14.02□□□□□ -0.17
CLCN3-210ENST00000515420 NRIP1P48552 1158 aa14.02□□□□□ -0.17
CLCN3-210ENST00000515420 TUSC3Q13454 348 aa14.02□□□□□ -0.17
CLCN3-210ENST00000515420 PKP1Q13835 747 aa14.02□□□□□ -0.17
CLCN3-210ENST00000515420 BECN1Q14457 450 aa14.02□□□□□ -0.17
CLCN3-210ENST00000515420 DHX8Q14562 1220 aaKnown RBP14.02□□□□□ -0.17
CLCN3-210ENST00000515420 ZNF568Q3ZCX4 644 aa14.02□□□□□ -0.17
CLCN3-210ENST00000515420 PLPP4Q5VZY2 271 aa14.02□□□□□ -0.17
CLCN3-210ENST00000515420 MPZL3Q6UWV2 235 aa14.02□□□□□ -0.17
CLCN3-210ENST00000515420 SV2BQ7L1I2 683 aa14.02□□□□□ -0.17
CLCN3-210ENST00000515420 HAUS6Q7Z4H7 955 aa14.02□□□□□ -0.17
CLCN3-210ENST00000515420 VPS52Q8N1B4 723 aa14.02□□□□□ -0.17
CLCN3-210ENST00000515420 MRPL43Q8N983 215 aaKnown RBP14.02□□□□□ -0.17
CLCN3-210ENST00000515420 ADAMTS19Q8TE59 1207 aa14.02□□□□□ -0.17
CLCN3-210ENST00000515420 BCL7CQ8WUZ0 217 aaPredicted RBP14.02□□□□□ -0.17
CLCN3-210ENST00000515420 TARS2Q9BW92 718 aaKnown RBP14.02□□□□□ -0.17
CLCN3-210ENST00000515420 CDT1Q9H211 546 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms