RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 TMOD1P28289 359 aa9.95□□□□□ -0.82
CPNE4-213ENST00000515418 ABCD1P33897 745 aa9.95□□□□□ -0.82
CPNE4-213ENST00000515418 TNFSF9P41273 254 aa9.95□□□□□ -0.82
CPNE4-213ENST00000515418 MYL7Q01449 175 aa9.95□□□□□ -0.82
CPNE4-213ENST00000515418 MBTD1Q05BQ5 628 aa9.95□□□□□ -0.82
CPNE4-213ENST00000515418 KIZQ2M2Z5 673 aa9.95□□□□□ -0.82
CPNE4-213ENST00000515418 TRIM65Q6PJ69 517 aa9.95□□□□□ -0.82
CPNE4-213ENST00000515418 CXCL17Q6UXB2 119 aa9.95□□□□□ -0.82
CPNE4-213ENST00000515418 LMO3Q8TAP4 145 aa9.95□□□□□ -0.82
CPNE4-213ENST00000515418 NLRP7Q8WX94 980 aa9.95□□□□□ -0.82
CPNE4-213ENST00000515418 ZNF516Q92618 1163 aa9.95□□□□□ -0.82
CPNE4-213ENST00000515418 KCNN1Q92952 543 aa9.95□□□□□ -0.82
CPNE4-213ENST00000515418 MRPL4Q9BYD3 311 aaKnown RBP9.95□□□□□ -0.82
CPNE4-213ENST00000515418 INTS2Q9H0H0 1204 aaKnown RBP9.95□□□□□ -0.82
CPNE4-213ENST00000515418 NHEJ1Q9H9Q4 299 aaPredicted RBP9.95□□□□□ -0.82
CPNE4-213ENST00000515418 ZNHIT6Q9NWK9 470 aaKnown RBP9.95□□□□□ -0.82
CPNE4-213ENST00000515418 HDAC6Q9UBN7 1215 aa9.95□□□□□ -0.82
CPNE4-213ENST00000515418 SRRDQ9UH36 339 aa9.95□□□□□ -0.82
CPNE4-213ENST00000515418 TSKSQ9UJT2 592 aa9.95□□□□□ -0.82
CPNE4-213ENST00000515418 TFR2Q9UP52 801 aa9.95□□□□□ -0.82
CPNE4-213ENST00000515418 ADGRG1Q9Y653 693 aa9.95□□□□□ -0.82
CPNE4-213ENST00000515418 GTPBP10A4D1E9 387 aaKnown RBP9.94□□□□□ -0.82
CPNE4-213ENST00000515418 RRN3P2A6NIE6 340 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 GPR25O00155 361 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 HAS3O00219 553 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 ACKR2O00590 384 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 MAPK13O15264 365 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 OSTNP61366 133 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 PURAQ00577 322 aaKnown RBP9.94□□□□□ -0.82
CPNE4-213ENST00000515418 PRPF4BQ13523 1007 aaKnown RBP9.94□□□□□ -0.82
CPNE4-213ENST00000515418 RAPGEF1Q13905 1077 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 MEA1Q16626 185 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 TMEM132AQ24JP5 1023 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 EEF1DP3Q658K8 133 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 SCARA3Q6AZY7 606 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 SLFN12LQ6IEE8 588 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 EHBP1Q8NDI1 1231 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 SEMA4DQ92854 862 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 CPB2Q96IY4 423 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 SCLT1Q96NL6 688 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 C2orf40Q9H1Z8 148 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 PLCB1Q9NQ66 1216 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 ARHGAP20Q9P2F6 1191 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 EPN1Q9Y6I3 576 aaPredicted RBP9.94□□□□□ -0.82
CPNE4-213ENST00000515418 NRCAMQ92823 1304 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 ABLIM1O14639 778 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 SEPT4O43236 478 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 TOM1L1O75674 476 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 CYP2C9P11712 490 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 SCP2P22307 547 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 EIF4A3P38919 411 aaKnown RBP9.94□□□□□ -0.82
CPNE4-213ENST00000515418 PHKA2P46019 1235 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 KCNJ6P48051 423 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 GPC3P51654 580 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 GJA9P57773 515 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 CYP27A1Q02318 531 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 SFMBT2Q5VUG0 894 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 IQCEQ6IPM2 695 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 PHLDB3Q6NSJ2 640 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 ZPBP2Q6X784 338 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 TSHZ1Q6ZSZ6 1077 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 THNSL1Q8IYQ7 743 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 DNAJB3Q8WWF6 145 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 IQCDQ96DY2 449 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 MAP7D2Q96T17 732 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 EDEM3Q9BZQ6 932 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 PTPRHQ9HD43 1115 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 LZTFL1Q9NQ48 299 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 KCND1Q9NSA2 647 aa9.94□□□□□ -0.82
CPNE4-213ENST00000515418 REXO2Q9Y3B8 237 aaKnown RBP9.94□□□□□ -0.82
CPNE4-213ENST00000515418 PTPRJQ12913 1337 aa9.93□□□□□ -0.82
CPNE4-213ENST00000515418 FAM189A1O60320 539 aa9.93□□□□□ -0.82
CPNE4-213ENST00000515418 OFD1O75665 1012 aa9.93□□□□□ -0.82
CPNE4-213ENST00000515418 NDUFA10O95299 355 aa9.93□□□□□ -0.82
CPNE4-213ENST00000515418 RARBP10826 455 aa9.93□□□□□ -0.82
CPNE4-213ENST00000515418 TNNT1P13805 278 aa9.93□□□□□ -0.82
CPNE4-213ENST00000515418 TNNI1P19237 187 aa9.93□□□□□ -0.82
CPNE4-213ENST00000515418 HNRNPH3P31942 346 aaKnown RBP9.93□□□□□ -0.82
CPNE4-213ENST00000515418 ADAM17P78536 824 aa9.93□□□□□ -0.82
CPNE4-213ENST00000515418 PTPN14Q15678 1187 aa9.93□□□□□ -0.82
CPNE4-213ENST00000515418 AMHR2Q16671 573 aa9.93□□□□□ -0.82
CPNE4-213ENST00000515418 ARHGAP44Q17R89 818 aa9.93□□□□□ -0.82
CPNE4-213ENST00000515418 ATF7IP2Q5U623 682 aa9.93□□□□□ -0.82
CPNE4-213ENST00000515418 HGSNATQ68CP4 663 aa9.93□□□□□ -0.82
CPNE4-213ENST00000515418 NYAP1Q6ZVC0 841 aa9.93□□□□□ -0.82
CPNE4-213ENST00000515418 SV2AQ7L0J3 742 aa9.93□□□□□ -0.82
CPNE4-213ENST00000515418 ARHGEF19Q8IW93 802 aa9.93□□□□□ -0.82
CPNE4-213ENST00000515418 TMEM192Q8IY95 271 aa9.93□□□□□ -0.82
CPNE4-213ENST00000515418 C7orf31Q8N865 590 aa9.93□□□□□ -0.82
CPNE4-213ENST00000515418 CEP120Q8N960 986 aa9.93□□□□□ -0.82
CPNE4-213ENST00000515418 RAET1EQ8TD07 263 aa9.93□□□□□ -0.82
CPNE4-213ENST00000515418 TMC2Q8TDI7 906 aa9.93□□□□□ -0.82
CPNE4-213ENST00000515418 ZNF296Q8WUU4 475 aaPredicted RBP9.93□□□□□ -0.82
CPNE4-213ENST00000515418 ZNF592Q92610 1267 aa9.93□□□□□ -0.82
CPNE4-213ENST00000515418 FAM212AQ96EL1 285 aa9.93□□□□□ -0.82
CPNE4-213ENST00000515418 CFHR5Q9BXR6 569 aa9.93□□□□□ -0.82
CPNE4-213ENST00000515418 IRX2Q9BZI1 471 aaPredicted RBP9.93□□□□□ -0.82
CPNE4-213ENST00000515418 XPNPEP3Q9NQH7 507 aa9.93□□□□□ -0.82
CPNE4-213ENST00000515418 RBAKQ9NYW8 714 aaPredicted RBP9.93□□□□□ -0.82
CPNE4-213ENST00000515418 DNAJC12Q9UKB3 198 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms