RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 DCTN4Q9UJW0 460 aa13.23□□□□□ -0.29
COL11A1-210ENST00000512756 CRB1P82279 1406 aa13.23□□□□□ -0.29
COL11A1-210ENST00000512756 AKR1B1P15121 316 aa13.23□□□□□ -0.29
COL11A1-210ENST00000512756 NCAPHQ15003 741 aa13.23□□□□□ -0.29
COL11A1-210ENST00000512756 EDRF1Q3B7T1 1238 aa13.23□□□□□ -0.29
COL11A1-210ENST00000512756 ACAP3Q96P50 834 aa13.23□□□□□ -0.29
COL11A1-210ENST00000512756 KCND2Q9NZV8 630 aa13.23□□□□□ -0.29
COL11A1-210ENST00000512756 ZHX2Q9Y6X8 837 aa13.23□□□□□ -0.29
COL11A1-210ENST00000512756 RNF17Q9BXT8 1623 aaKnown RBP13.23□□□□□ -0.29
COL11A1-210ENST00000512756 PDS5AQ29RF7 1337 aaKnown RBP13.23□□□□□ -0.29
COL11A1-210ENST00000512756 ELF1P32519 619 aa13.23□□□□□ -0.29
COL11A1-210ENST00000512756 MDH1P40925 334 aaKnown RBP13.23□□□□□ -0.29
COL11A1-210ENST00000512756 LRRC23Q53EV4 343 aaPredicted RBP13.23□□□□□ -0.29
COL11A1-210ENST00000512756 PARD3BQ8TEW8 1205 aa13.23□□□□□ -0.29
COL11A1-210ENST00000512756 PI4K2BG5E9Z4 385 aa13.23□□□□□ -0.29
COL11A1-210ENST00000512756 C21orf2O43822 256 aa13.23□□□□□ -0.29
COL11A1-210ENST00000512756 SNX2O60749 519 aa13.23□□□□□ -0.29
COL11A1-210ENST00000512756 SCP2P22307 547 aa13.23□□□□□ -0.29
COL11A1-210ENST00000512756 NFX1Q12986 1120 aaKnown RBP13.23□□□□□ -0.29
COL11A1-210ENST00000512756 EFHC2Q5JST6 749 aa13.23□□□□□ -0.29
COL11A1-210ENST00000512756 C1orf54Q8WWF1 131 aa13.23□□□□□ -0.29
COL11A1-210ENST00000512756 EXT2Q93063 718 aa13.23□□□□□ -0.29
COL11A1-210ENST00000512756 POLD4Q9HCU8 107 aa13.23□□□□□ -0.29
COL11A1-210ENST00000512756 MLXIPLQ9NP71 852 aa13.23□□□□□ -0.29
COL11A1-210ENST00000512756 GTSE1Q9NYZ3 720 aa13.23□□□□□ -0.29
COL11A1-210ENST00000512756 SMG5Q9UPR3 1016 aaKnown RBP13.23□□□□□ -0.29
COL11A1-210ENST00000512756 MCF2P10911 925 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 TTLL4Q14679 1199 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 CCNI2Q6ZMN8 369 aaPredicted RBP13.22□□□□□ -0.29
COL11A1-210ENST00000512756 ANO5Q75V66 913 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 SP8Q8IXZ3 490 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 KCTD17Q8N5Z5 321 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 ACAD9Q9H845 621 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 PPCSQ9HAB8 311 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 APEX2Q9UBZ4 518 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 A0A1W2PQJ5 194 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 FAM196BA6NMK8 535 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 RXRBP28702 533 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 TSPY1Q01534 308 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 WWP1Q9H0M0 922 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 EPN3Q9H201 632 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 SETBP1Q9Y6X0 1596 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 H3BRJ5 948 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 COPB2P35606 906 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 LCA5Q86VQ0 697 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.22□□□□□ -0.29
COL11A1-210ENST00000512756 MEFVO15553 781 aaPredicted RBP13.22□□□□□ -0.29
COL11A1-210ENST00000512756 ITIH2P19823 946 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 ARSEP51690 589 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 HIF1AQ16665 826 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 SLC10A5Q5PT55 438 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 FAM102AQ5T9C2 384 aaPredicted RBP13.22□□□□□ -0.29
COL11A1-210ENST00000512756 FRA10AC1Q70Z53 315 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 RCOR2Q8IZ40 523 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 TC2NQ8N9U0 490 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 TRIM62Q9BVG3 475 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 FOXP3Q9BZS1 431 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 SMYD3Q9H7B4 428 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 ARL2BPQ9Y2Y0 163 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 TNS3Q68CZ2 1445 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 PSMD14O00487 310 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 SERPINB4P48594 390 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 FXR1P51114 621 aaKnown RBP eCLIP13.22□□□□□ -0.29
COL11A1-210ENST00000512756 GPSM2P81274 684 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 ZNF543Q08ER8 600 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 IFT43Q96FT9 208 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 GCNAQ96QF7 691 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 WRNIP1Q96S55 665 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 MTMR4Q9NYA4 1195 aa13.22□□□□□ -0.29
COL11A1-210ENST00000512756 PHF2O75151 1096 aa13.21□□□□□ -0.29
COL11A1-210ENST00000512756 RHPN2Q8IUC4 686 aa13.21□□□□□ -0.29
COL11A1-210ENST00000512756 ARHGEF1Q92888 912 aaKnown RBP13.21□□□□□ -0.29
COL11A1-210ENST00000512756 FAM161BQ96MY7 647 aa13.21□□□□□ -0.29
COL11A1-210ENST00000512756 MAP3K14Q99558 947 aa13.21□□□□□ -0.29
COL11A1-210ENST00000512756 POLR3CQ9BUI4 534 aaPredicted RBP13.21□□□□□ -0.29
COL11A1-210ENST00000512756 IRX2Q9BZI1 471 aaPredicted RBP13.21□□□□□ -0.29
COL11A1-210ENST00000512756 PIM2Q9P1W9 311 aa13.21□□□□□ -0.29
COL11A1-210ENST00000512756 SLC13A4Q9UKG4 626 aa13.21□□□□□ -0.29
COL11A1-210ENST00000512756 SPHKAPQ2M3C7 1700 aa13.21□□□□□ -0.29
COL11A1-210ENST00000512756 DIAPH2O60879 1101 aa13.21□□□□□ -0.29
COL11A1-210ENST00000512756 LRRC14Q15048 493 aa13.21□□□□□ -0.29
COL11A1-210ENST00000512756 SPATA21Q7Z572 469 aa13.21□□□□□ -0.29
COL11A1-210ENST00000512756 CCNYL1Q8N7R7 359 aa13.21□□□□□ -0.29
COL11A1-210ENST00000512756 WDR35Q9P2L0 1181 aa13.21□□□□□ -0.29
COL11A1-210ENST00000512756 CDH16O75309 829 aa13.21□□□□□ -0.3
COL11A1-210ENST00000512756 UCHL3P15374 230 aa13.21□□□□□ -0.3
COL11A1-210ENST00000512756 GUCY1A3Q02108 690 aa13.21□□□□□ -0.3
COL11A1-210ENST00000512756 MAPRE2Q15555 327 aa13.21□□□□□ -0.3
COL11A1-210ENST00000512756 NAB2Q15742 525 aa13.21□□□□□ -0.3
COL11A1-210ENST00000512756 CYP26A1O43174 497 aa13.21□□□□□ -0.3
COL11A1-210ENST00000512756 KITP10721 976 aa13.21□□□□□ -0.3
COL11A1-210ENST00000512756 TYK2P29597 1187 aa13.21□□□□□ -0.3
COL11A1-210ENST00000512756 NMT1P30419 496 aaKnown RBP13.21□□□□□ -0.3
COL11A1-210ENST00000512756 GALCP54803 685 aa13.21□□□□□ -0.3
COL11A1-210ENST00000512756 CDH6P55285 790 aa13.21□□□□□ -0.3
COL11A1-210ENST00000512756 EFTUD2Q15029 972 aaKnown RBP eCLIP13.21□□□□□ -0.3
COL11A1-210ENST00000512756 TWF2Q6IBS0 349 aaKnown RBP13.21□□□□□ -0.3
COL11A1-210ENST00000512756 LDHDQ86WU2 507 aa13.21□□□□□ -0.3
COL11A1-210ENST00000512756 ARHGAP18Q8N392 663 aa13.21□□□□□ -0.3
COL11A1-210ENST00000512756 KLC4Q9NSK0 619 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms