RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 FAM86C2PA6NEL3 165 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 TBKBP1A7MCY6 615 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 ADARB2-AS1A8MUL3 147 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 ZBTB42B2RXF5 422 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 MBTPS2O43462 519 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 DKK1O94907 266 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 CSPG5O95196 566 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 C22orf31O95567 290 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 ZSCAN20P17040 1043 aaPredicted RBP8.1□□□□□ -1.11
USP46-208ENST00000512656 IFNAR1P17181 557 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 ALAS2P22557 587 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 RPS6KB1P23443 525 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 SFNP31947 248 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 HSPA4P34932 840 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 USP11P51784 963 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 JAK3P52333 1124 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 PCBP4P57723 403 aaKnown RBP8.1□□□□□ -1.11
USP46-208ENST00000512656 CDC42EP1Q00587 391 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 ADAM15Q13444 863 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 CLUL1Q15846 466 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 PKN1Q16512 942 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 KIZQ2M2Z5 673 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 EFHBQ8N7U6 833 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 MICAL1Q8TDZ2 1067 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 POF1BQ8WVV4 589 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 UIMC1Q96RL1 719 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 RIT2Q99578 217 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 SLC26A6Q9BXS9 759 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 TSPAN10Q9H1Z9 355 aaPredicted RBP8.1□□□□□ -1.11
USP46-208ENST00000512656 ELAC1Q9H777 363 aaKnown RBP8.1□□□□□ -1.11
USP46-208ENST00000512656 TLE6Q9H808 572 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 C11orf16Q9NQ32 467 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 TMEM161AQ9NX61 479 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 GABBR1Q9UBS5 961 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 AKT3Q9Y243 479 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 SNX14Q9Y5W7 946 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 NLRC5Q86WI3 1866 aa8.1□□□□□ -1.11
USP46-208ENST00000512656 C9IYK1 514 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 EPB41L2O43491 1005 aaKnown RBP8.09□□□□□ -1.11
USP46-208ENST00000512656 MGEA5O60502 916 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 GAS7O60861 476 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 EYA4O95677 639 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 VTNP04004 478 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 SRGAP2BP0DMP2 458 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 CPA1P15085 419 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 LAG3P18627 525 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 NRIP1P48552 1158 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 NLRP5P59047 1200 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 FAM189BP81408 668 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 CAMK1Q14012 370 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 HIF1AQ16665 826 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 TBCELQ5QJ74 424 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 EFCAB12Q6NXP0 572 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 CPLX2Q6PUV4 134 aaKnown RBP8.09□□□□□ -1.11
USP46-208ENST00000512656 SYT9Q86SS6 491 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 FAM228AQ86W67 206 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 THNSL1Q8IYQ7 743 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 ABI1Q8IZP0 508 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 FAM177A1Q8N128 213 aaPredicted RBP8.09□□□□□ -1.11
USP46-208ENST00000512656 RDM1Q8NG50 284 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 PHKBQ93100 1093 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 CCDC136Q96JN2 1154 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 MSLNLQ96KJ4 702 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 SCLT1Q96NL6 688 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 CDCA3Q99618 268 aaPredicted RBP8.09□□□□□ -1.11
USP46-208ENST00000512656 OSMRQ99650 979 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 TEKT3Q9BXF9 490 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 AGXT2Q9BYV1 514 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 TMEM117Q9H0C3 514 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 KCNH6Q9H252 994 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 TLR9Q9NR96 1032 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 DISC1Q9NRI5 854 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 PUF60Q9UHX1 559 aaKnown RBP8.09□□□□□ -1.11
USP46-208ENST00000512656 LZTS1Q9Y250 596 aa8.09□□□□□ -1.11
USP46-208ENST00000512656 C5orf42Q9H799 3197 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 CARNS1A5YM72 827 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 CPLX1O14810 134 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 MSH4O15457 936 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 LINC01565O15544 149 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 TBX10O75333 385 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 GPR32O75388 356 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 FGF18O76093 207 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 EIF4BP23588 611 aaKnown RBP8.08□□□□□ -1.12
USP46-208ENST00000512656 DNAJB1P25685 340 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 PDIA3P30101 505 aaKnown RBP8.08□□□□□ -1.12
USP46-208ENST00000512656 GTF2F1P35269 517 aaKnown RBP eCLIP8.08□□□□□ -1.12
USP46-208ENST00000512656 PPM1AP35813 382 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 GATMP50440 423 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 DNM2P50570 870 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 CLCN3P51790 818 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 EVCP57679 992 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 NLRP11P59045 1033 aaKnown RBP8.08□□□□□ -1.12
USP46-208ENST00000512656 PRKCEQ02156 737 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 KRT17Q04695 432 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 DLX2Q07687 328 aaPredicted RBP8.08□□□□□ -1.12
USP46-208ENST00000512656 SSRP1Q08945 709 aaKnown RBP8.08□□□□□ -1.12
USP46-208ENST00000512656 TBC1D8BQ0IIM8 1120 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 COASYQ13057 564 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 DSC3Q14574 896 aa8.08□□□□□ -1.12
USP46-208ENST00000512656 NTRK3Q16288 839 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms