RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 SLC30A10Q6XR72 485 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 GPD1LQ8N335 351 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 HDAC7Q8WUI4 952 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.57□□□□□ -1.042e-7■■■■■ 32.7
NEK1-208ENST00000512193 DUSP9Q99956 384 aaKnown RBP8.57□□□□□ -1.04
NEK1-208ENST00000512193 ERP44Q9BS26 406 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 ISCUQ9H1K1 167 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 SNX25Q9H3E2 840 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 LRRC4Q9HBW1 653 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 FBXO28Q9NVF7 368 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 ATF5Q9Y2D1 282 aaPredicted RBP8.57□□□□□ -1.04
NEK1-208ENST00000512193 GOLGA8RI6L899 631 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 GYG2O15488 501 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 DCTN3O75935 186 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 CALB1P05937 261 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 NCF2P19878 526 aaPredicted RBP8.57□□□□□ -1.04
NEK1-208ENST00000512193 HSD17B3P37058 310 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 ARSEP51690 589 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 SLC29A2Q14542 456 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 OR6B3Q8NGW1 331 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 ATL2Q8NHH9 583 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 TPCN2Q8NHX9 752 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 NUDT12Q9BQG2 462 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 RUSC1Q9BVN2 902 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 SLC9A2Q9UBY0 812 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 FIS1Q9Y3D6 152 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 AFF2P51816 1311 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 F5H423 210 aaPredicted RBP8.57□□□□□ -1.04
NEK1-208ENST00000512193 FOXN3O00409 490 aaPredicted RBP8.57□□□□□ -1.04
NEK1-208ENST00000512193 MSH4O15457 936 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 PHF2O75151 1096 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 TMEM253P0C7T8 217 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 PON1P27169 355 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 SNRNP35Q16560 246 aaKnown RBP8.57□□□□□ -1.04
NEK1-208ENST00000512193 MORC4Q8TE76 937 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 PSPC1Q8WXF1 523 aaKnown RBP8.57□□□□□ -1.04
NEK1-208ENST00000512193 SYN2Q92777 582 aaPredicted RBP8.57□□□□□ -1.04
NEK1-208ENST00000512193 XPO6Q96QU8 1125 aaKnown RBP8.57□□□□□ -1.04
NEK1-208ENST00000512193 LBHD1Q9BQE6 289 aaPredicted RBP8.57□□□□□ -1.04
NEK1-208ENST00000512193 HAUS2Q9NVX0 235 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 CASQ2O14958 399 aaPredicted RBP8.57□□□□□ -1.04
NEK1-208ENST00000512193 GLI1P08151 1106 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 ERFP50548 548 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 BAATQ14032 418 aaPredicted RBP8.57□□□□□ -1.04
NEK1-208ENST00000512193 TFDP2Q14188 446 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 DBN1Q16643 649 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 MMEL1Q495T6 779 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 SYCP2LQ5T4T6 812 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 STRIP1Q5VSL9 837 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 HHIPL2Q6UWX4 724 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 PARP9Q8IXQ6 854 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 VGLL2Q8N8G2 317 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 CALR3Q96L12 384 aaKnown RBP8.57□□□□□ -1.04
NEK1-208ENST00000512193 FAM167BQ9BTA0 163 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 PI4K2AQ9BTU6 479 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 TMEM117Q9H0C3 514 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 THAP2Q9H0W7 228 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 SPATA31D1Q6ZQQ2 1576 aa8.57□□□□□ -1.04
NEK1-208ENST00000512193 GGPS1O95749 300 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 ANXA13P27216 316 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 PPM1FP49593 454 aaPredicted RBP8.56□□□□□ -1.04
NEK1-208ENST00000512193 ZC3H18Q86VM9 953 aaKnown RBP8.56□□□□□ -1.04
NEK1-208ENST00000512193 ANKMY2Q8IV38 441 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 TTC13Q8NBP0 860 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 GSDMBQ8TAX9 411 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 SCFD1Q8WVM8 642 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 TMEM143Q96AN5 459 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 CYFIP2Q96F07 1278 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 SEC16BQ96JE7 1060 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 MTRQ99707 1265 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 ECT2Q9H8V3 914 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 ZNF302Q9NR11 478 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 SHPRHQ149N8 1683 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 CFLARO15519 480 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 CYTH3O43739 400 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 AGTP01019 485 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 CORO7P57737 925 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 LRIG3Q6UXM1 1119 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 ENOSF1Q7L5Y1 443 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 RHPN2Q8IUC4 686 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 CCDC117Q8IWD4 279 aaPredicted RBP8.56□□□□□ -1.04
NEK1-208ENST00000512193 DEPDC1BQ8WUY9 529 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 RBM15Q96T37 977 aaKnown RBP eCLIP8.56□□□□□ -1.04
NEK1-208ENST00000512193 AGPAT3Q9NRZ7 376 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 SUCLA2Q9P2R7 463 aaPredicted RBP8.56□□□□□ -1.04
NEK1-208ENST00000512193 IP6K2Q9UHH9 426 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 TLK1Q9UKI8 766 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 AKAP3O75969 853 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 KITP10721 976 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 SKIP12755 728 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 TBXAS1P24557 533 aaPredicted RBP8.56□□□□□ -1.04
NEK1-208ENST00000512193 HSPA9P38646 679 aaKnown RBP8.56□□□□□ -1.04
NEK1-208ENST00000512193 NR1H3Q13133 447 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 PTGISQ16647 500 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 FBXO41Q8TF61 875 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 GJD4Q96KN9 370 aaPredicted RBP8.56□□□□□ -1.04
NEK1-208ENST00000512193 TTC25Q96NG3 672 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 RPS6KC1Q96S38 1066 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 KLC2Q9H0B6 622 aa8.56□□□□□ -1.04
NEK1-208ENST00000512193 UVRAGQ9P2Y5 699 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms