RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 TRIM49CP0CI26 452 aa16.51■□□□□ 0.23
SCLT1-209ENST00000511426 GPC3P51654 580 aa16.51■□□□□ 0.23
SCLT1-209ENST00000511426 KRT83P78385 493 aa16.51■□□□□ 0.23
SCLT1-209ENST00000511426 SLC9C1Q4G0N8 1177 aa16.51■□□□□ 0.23
SCLT1-209ENST00000511426 CBWD6Q4V339 395 aa16.51■□□□□ 0.23
SCLT1-209ENST00000511426 CBWD3Q5JTY5 395 aa16.51■□□□□ 0.23
SCLT1-209ENST00000511426 CBWD5Q5RIA9 395 aa16.51■□□□□ 0.23
SCLT1-209ENST00000511426 MAP3K21Q5TCX8 1036 aa16.51■□□□□ 0.23
SCLT1-209ENST00000511426 ATF7IP2Q5U623 682 aa16.51■□□□□ 0.23
SCLT1-209ENST00000511426 SFMBT2Q5VUG0 894 aa16.51■□□□□ 0.23
SCLT1-209ENST00000511426 DPY19L2P1Q6NXN4 242 aa16.51■□□□□ 0.23
SCLT1-209ENST00000511426 RRAGAQ7L523 313 aa16.51■□□□□ 0.23
SCLT1-209ENST00000511426 APBB1IPQ7Z5R6 666 aaPredicted RBP16.51■□□□□ 0.23
SCLT1-209ENST00000511426 KIAA0319LQ8IZA0 1049 aa16.51■□□□□ 0.23
SCLT1-209ENST00000511426 TXLNBQ8N3L3 684 aa16.51■□□□□ 0.23
SCLT1-209ENST00000511426 NME8Q8N427 588 aa16.51■□□□□ 0.23
SCLT1-209ENST00000511426 EHBP1Q8NDI1 1231 aa16.51■□□□□ 0.23
SCLT1-209ENST00000511426 SAAL1Q96ER3 474 aa16.51■□□□□ 0.23
SCLT1-209ENST00000511426 PPP1R13BQ96KQ4 1090 aa16.51■□□□□ 0.23
SCLT1-209ENST00000511426 FNBP1Q96RU3 617 aa16.51■□□□□ 0.23
SCLT1-209ENST00000511426 FAM213AQ9BRX8 229 aa16.51■□□□□ 0.23
SCLT1-209ENST00000511426 PTPRHQ9HD43 1115 aa16.51■□□□□ 0.23
SCLT1-209ENST00000511426 PPP2R2CQ9Y2T4 447 aa16.51■□□□□ 0.23
SCLT1-209ENST00000511426 C6orf222P0C671 652 aaPredicted RBP16.5■□□□□ 0.23
SCLT1-209ENST00000511426 SLC9A1P19634 815 aa16.5■□□□□ 0.23
SCLT1-209ENST00000511426 CACNB2Q08289 660 aaPredicted RBP16.5■□□□□ 0.23
SCLT1-209ENST00000511426 MAPK8IP2Q13387 824 aaPredicted RBP16.5■□□□□ 0.23
SCLT1-209ENST00000511426 EPC2Q52LR7 807 aa16.5■□□□□ 0.23
SCLT1-209ENST00000511426 C1orf220Q5T0J3 134 aa16.5■□□□□ 0.23
SCLT1-209ENST00000511426 TAF2Q6P1X5 1199 aa16.5■□□□□ 0.23
SCLT1-209ENST00000511426 ZNF662Q6ZS27 426 aa16.5■□□□□ 0.23
SCLT1-209ENST00000511426 SPAG5Q96R06 1193 aa16.5■□□□□ 0.23
SCLT1-209ENST00000511426 SIX2Q9NPC8 291 aa16.5■□□□□ 0.23
SCLT1-209ENST00000511426 SETD4Q9NVD3 440 aa16.5■□□□□ 0.23
SCLT1-209ENST00000511426 RBAKQ9NYW8 714 aaPredicted RBP16.5■□□□□ 0.23
SCLT1-209ENST00000511426 ANKFY1Q9P2R3 1169 aa16.5■□□□□ 0.23
SCLT1-209ENST00000511426 ADGRG1Q9Y653 693 aa16.5■□□□□ 0.23
SCLT1-209ENST00000511426 EPN1Q9Y6I3 576 aaPredicted RBP16.5■□□□□ 0.23
SCLT1-209ENST00000511426 C17orf102A2RUQ5 167 aa16.5■□□□□ 0.23
SCLT1-209ENST00000511426 GOLGA8IPA6NC78 632 aa16.5■□□□□ 0.23
SCLT1-209ENST00000511426 GOLGA8JA6NMD2 632 aa16.5■□□□□ 0.23
SCLT1-209ENST00000511426 LRRIQ3A6PVS8 624 aaPredicted RBP16.5■□□□□ 0.23
SCLT1-209ENST00000511426 EIF3CLB5ME19 914 aaKnown RBP16.5■□□□□ 0.23
SCLT1-209ENST00000511426 FKTNO75072 461 aa16.5■□□□□ 0.23
SCLT1-209ENST00000511426 NDUFA10O95299 355 aa16.5■□□□□ 0.23
SCLT1-209ENST00000511426 SERPING1P05155 500 aa16.5■□□□□ 0.23
SCLT1-209ENST00000511426 MATR3P43243 847 aaKnown RBP eCLIP16.5■□□□□ 0.232e-6■■■□□ 18.8
SCLT1-209ENST00000511426 PPP3CAQ08209 521 aa16.5■□□□□ 0.23
SCLT1-209ENST00000511426 PTPN14Q15678 1187 aa16.5■□□□□ 0.23
SCLT1-209ENST00000511426 RAD9BQ6WBX8 426 aa16.5■□□□□ 0.23
SCLT1-209ENST00000511426 NYAP1Q6ZVC0 841 aa16.5■□□□□ 0.23
SCLT1-209ENST00000511426 BRSK2Q8IWQ3 736 aa16.5■□□□□ 0.23
SCLT1-209ENST00000511426 EIF3CQ99613 913 aaKnown RBP16.5■□□□□ 0.23
SCLT1-209ENST00000511426 TCHPQ9BT92 498 aa16.5■□□□□ 0.23
SCLT1-209ENST00000511426 STK33Q9BYT3 514 aa16.5■□□□□ 0.23
SCLT1-209ENST00000511426 GCOM2Q9BZD3 368 aaPredicted RBP16.5■□□□□ 0.23
SCLT1-209ENST00000511426 TMEM117Q9H0C3 514 aa16.5■□□□□ 0.23
SCLT1-209ENST00000511426 INTS2Q9H0H0 1204 aaKnown RBP16.5■□□□□ 0.23
SCLT1-209ENST00000511426 A0A087WZ62 844 aa16.49■□□□□ 0.23
SCLT1-209ENST00000511426 ABLIM1O14639 778 aa16.49■□□□□ 0.23
SCLT1-209ENST00000511426 ADAMTS4O75173 837 aa16.49■□□□□ 0.23
SCLT1-209ENST00000511426 OFD1O75665 1012 aa16.49■□□□□ 0.23
SCLT1-209ENST00000511426 CABYRO75952 493 aa16.49■□□□□ 0.23
SCLT1-209ENST00000511426 MCF2P10911 925 aa16.49■□□□□ 0.23
SCLT1-209ENST00000511426 PRKCIP41743 596 aa16.49■□□□□ 0.23
SCLT1-209ENST00000511426 DLG4P78352 724 aa16.49■□□□□ 0.23
SCLT1-209ENST00000511426 NCBP1Q09161 790 aaKnown RBP16.49■□□□□ 0.23
SCLT1-209ENST00000511426 GNASQ5JWF2 1037 aa16.49■□□□□ 0.23
SCLT1-209ENST00000511426 CRELD2Q6UXH1 353 aaPredicted RBP16.49■□□□□ 0.23
SCLT1-209ENST00000511426 SESTD1Q86VW0 696 aa16.49■□□□□ 0.23
SCLT1-209ENST00000511426 C7orf31Q8N865 590 aa16.49■□□□□ 0.23
SCLT1-209ENST00000511426 PCSK9Q8NBP7 692 aaKnown RBP16.49■□□□□ 0.23
SCLT1-209ENST00000511426 SLAIN1Q8ND83 568 aa16.49■□□□□ 0.23
SCLT1-209ENST00000511426 FBXL13Q8NEE6 735 aa16.49■□□□□ 0.23
SCLT1-209ENST00000511426 LMO3Q8TAP4 145 aa16.49■□□□□ 0.23
SCLT1-209ENST00000511426 CD99L2Q8TCZ2 262 aa16.49■□□□□ 0.23
SCLT1-209ENST00000511426 PLEKHO2Q8TD55 490 aa16.49■□□□□ 0.23
SCLT1-209ENST00000511426 NLRP7Q8WX94 980 aa16.49■□□□□ 0.23
SCLT1-209ENST00000511426 CCDC42Q96M95 316 aa16.49■□□□□ 0.23
SCLT1-209ENST00000511426 FDXACB1Q9BRP7 624 aaPredicted RBP16.49■□□□□ 0.23
SCLT1-209ENST00000511426 NHEJ1Q9H9Q4 299 aaPredicted RBP16.49■□□□□ 0.23
SCLT1-209ENST00000511426 LUC7LQ9NQ29 371 aaKnown RBP16.49■□□□□ 0.23
SCLT1-209ENST00000511426 XPNPEP3Q9NQH7 507 aa16.49■□□□□ 0.23
SCLT1-209ENST00000511426 FAM189A1O60320 539 aa16.48■□□□□ 0.23
SCLT1-209ENST00000511426 GFPT2O94808 682 aa16.48■□□□□ 0.23
SCLT1-209ENST00000511426 ERLIN2O94905 339 aa16.48■□□□□ 0.23
SCLT1-209ENST00000511426 CYP2C9P11712 490 aa16.48■□□□□ 0.23
SCLT1-209ENST00000511426 PRKAR2AP13861 404 aaKnown RBP16.48■□□□□ 0.23
SCLT1-209ENST00000511426 AXLP30530 894 aa16.48■□□□□ 0.23
SCLT1-209ENST00000511426 GCLMP48507 274 aa16.48■□□□□ 0.23
SCLT1-209ENST00000511426 JAM2P57087 298 aa16.48■□□□□ 0.23
SCLT1-209ENST00000511426 NLRP11P59045 1033 aaKnown RBP16.48■□□□□ 0.23
SCLT1-209ENST00000511426 AMHR2Q16671 573 aa16.48■□□□□ 0.23
SCLT1-209ENST00000511426 ZNF568Q3ZCX4 644 aa16.48■□□□□ 0.23
SCLT1-209ENST00000511426 C15orf39Q6ZRI6 1047 aa16.48■□□□□ 0.23
SCLT1-209ENST00000511426 ENOSF1Q7L5Y1 443 aa16.48■□□□□ 0.23
SCLT1-209ENST00000511426 KLHDC9Q8NEP7 349 aa16.48■□□□□ 0.23
SCLT1-209ENST00000511426 RAET1EQ8TD07 263 aa16.48■□□□□ 0.23
SCLT1-209ENST00000511426 LENG1Q96BZ8 264 aaPredicted RBP16.48■□□□□ 0.23
SCLT1-209ENST00000511426 SCLT1Q96NL6 688 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms