RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 CEP152O94986 1710 aa9.43□□□□□ -0.9
USP53-206ENST00000510737 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.43□□□□□ -0.9
USP53-206ENST00000510737 EFCAB6Q5THR3 1501 aa9.43□□□□□ -0.9
USP53-206ENST00000510737 ASXL1Q8IXJ9 1541 aa9.43□□□□□ -0.9
USP53-206ENST00000510737 ATRNO75882 1429 aa9.43□□□□□ -0.9
USP53-206ENST00000510737 A0A0A6YYJ9 748 aa9.43□□□□□ -0.9
USP53-206ENST00000510737 FOXN1O15353 648 aa9.43□□□□□ -0.9
USP53-206ENST00000510737 NR4A1P22736 598 aa9.43□□□□□ -0.9
USP53-206ENST00000510737 BCAR1P56945 870 aa9.43□□□□□ -0.9
USP53-206ENST00000510737 CDCA2Q69YH5 1023 aaPredicted RBP9.43□□□□□ -0.9
USP53-206ENST00000510737 MB21D1Q8N884 522 aa9.43□□□□□ -0.9
USP53-206ENST00000510737 MNTQ99583 582 aa9.43□□□□□ -0.9
USP53-206ENST00000510737 MYL10Q9BUA6 226 aa9.43□□□□□ -0.9
USP53-206ENST00000510737 MTG2Q9H4K7 406 aa9.43□□□□□ -0.9
USP53-206ENST00000510737 NRDE2Q9H7Z3 1164 aa9.43□□□□□ -0.9
USP53-206ENST00000510737 CABP5Q9NP86 173 aa9.43□□□□□ -0.9
USP53-206ENST00000510737 RCAN3Q9UKA8 241 aa9.43□□□□□ -0.9
USP53-206ENST00000510737 FYCO1Q9BQS8 1478 aa9.42□□□□□ -0.9
USP53-206ENST00000510737 MTUS2Q5JR59 1369 aa9.42□□□□□ -0.9
USP53-206ENST00000510737 JUNP05412 331 aaKnown RBP9.42□□□□□ -0.9
USP53-206ENST00000510737 JMJD7P0C870 316 aa9.42□□□□□ -0.9
USP53-206ENST00000510737 KIR2DL3P43628 341 aa9.42□□□□□ -0.9
USP53-206ENST00000510737 PTTG1IPP53801 180 aa9.42□□□□□ -0.9
USP53-206ENST00000510737 ADCY2Q08462 1091 aa9.42□□□□□ -0.9
USP53-206ENST00000510737 ZNF174Q15697 407 aa9.42□□□□□ -0.9
USP53-206ENST00000510737 KRT40Q6A162 431 aa9.42□□□□□ -0.9
USP53-206ENST00000510737 ATXN2LQ8WWM7 1075 aaKnown RBP9.42□□□□□ -0.9
USP53-206ENST00000510737 RTF1Q92541 710 aaKnown RBP9.42□□□□□ -0.9
USP53-206ENST00000510737 PRRX2Q99811 253 aa9.42□□□□□ -0.9
USP53-206ENST00000510737 POFUT1Q9H488 388 aa9.42□□□□□ -0.9
USP53-206ENST00000510737 CHD2O14647 1828 aaKnown RBP9.41□□□□□ -0.9
USP53-206ENST00000510737 PRPF6O94906 941 aaKnown RBP9.41□□□□□ -0.9
USP53-206ENST00000510737 CFBP00751 764 aa9.41□□□□□ -0.9
USP53-206ENST00000510737 RABL3Q5HYI8 236 aa9.41□□□□□ -0.9
USP53-206ENST00000510737 RHOUQ7L0Q8 258 aa9.41□□□□□ -0.9
USP53-206ENST00000510737 MDGA1Q8NFP4 955 aa9.41□□□□□ -0.9
USP53-206ENST00000510737 OXSMQ9NWU1 459 aa9.41□□□□□ -0.9
USP53-206ENST00000510737 NCDNQ9UBB6 729 aa9.41□□□□□ -0.9
USP53-206ENST00000510737 PLEKHG1Q9ULL1 1385 aa9.4□□□□□ -0.9
USP53-206ENST00000510737 OPHN1O60890 802 aa9.4□□□□□ -0.9
USP53-206ENST00000510737 RAMP2O60895 175 aa9.4□□□□□ -0.9
USP53-206ENST00000510737 SMAD3P84022 425 aaKnown RBP9.4□□□□□ -0.9
USP53-206ENST00000510737 SPIDRQ14159 915 aa9.4□□□□□ -0.9
USP53-206ENST00000510737 BMS1Q14692 1282 aaKnown RBP9.4□□□□□ -0.9
USP53-206ENST00000510737 ZNF662Q6ZS27 426 aa9.4□□□□□ -0.9
USP53-206ENST00000510737 NME9Q86XW9 330 aa9.4□□□□□ -0.9
USP53-206ENST00000510737 CMTM4Q8IZR5 234 aa9.4□□□□□ -0.9
USP53-206ENST00000510737 RPGRQ92834 1020 aaKnown RBP9.4□□□□□ -0.9
USP53-206ENST00000510737 ZMAT4Q9H898 229 aa9.4□□□□□ -0.9
USP53-206ENST00000510737 C14orf93Q9H972 538 aaKnown RBP9.4□□□□□ -0.9
USP53-206ENST00000510737 SPO11Q9Y5K1 396 aa9.4□□□□□ -0.9
USP53-206ENST00000510737 UNC13BO14795 1591 aa9.4□□□□□ -0.9
USP53-206ENST00000510737 EIF2AK4Q9P2K8 1649 aaKnown RBP9.39□□□□□ -0.91
USP53-206ENST00000510737 APOL3O95236 402 aa9.39□□□□□ -0.91
USP53-206ENST00000510737 ATP2A2P16615 1042 aaKnown RBP9.39□□□□□ -0.91
USP53-206ENST00000510737 FAM214AQ32MH5 1076 aa9.39□□□□□ -0.91
USP53-206ENST00000510737 SLC25A43Q8WUT9 341 aaPredicted RBP9.39□□□□□ -0.91
USP53-206ENST00000510737 MLST8Q9BVC4 326 aa9.39□□□□□ -0.91
USP53-206ENST00000510737 FAM83GA6ND36 823 aa9.38□□□□□ -0.91
USP53-206ENST00000510737 DAPK3O43293 454 aa9.38□□□□□ -0.91
USP53-206ENST00000510737 ZFP36P26651 326 aaKnown RBP9.38□□□□□ -0.91
USP53-206ENST00000510737 LAIR1Q6GTX8 287 aa9.38□□□□□ -0.91
USP53-206ENST00000510737 KIAA1841Q6NSI8 718 aa9.38□□□□□ -0.91
USP53-206ENST00000510737 PHYKPLQ8IUZ5 450 aa9.38□□□□□ -0.91
USP53-206ENST00000510737 VRK3Q8IV63 474 aa9.38□□□□□ -0.91
USP53-206ENST00000510737 DNAJC10Q8IXB1 793 aa9.38□□□□□ -0.91
USP53-206ENST00000510737 SH3TC2Q8TF17 1288 aa9.38□□□□□ -0.91
USP53-206ENST00000510737 ZG16BQ96DA0 208 aa9.38□□□□□ -0.91
USP53-206ENST00000510737 ENKD1Q9H0I2 346 aa9.38□□□□□ -0.91
USP53-206ENST00000510737 ING3Q9NXR8 418 aa9.38□□□□□ -0.91
USP53-206ENST00000510737 MST1RQ04912 1400 aa9.38□□□□□ -0.91
USP53-206ENST00000510737 ELL2O00472 640 aaPredicted RBP9.37□□□□□ -0.91
USP53-206ENST00000510737 GAAP10253 952 aa9.37□□□□□ -0.91
USP53-206ENST00000510737 PROZP22891 400 aa9.37□□□□□ -0.91
USP53-206ENST00000510737 FSTL1Q12841 308 aa9.37□□□□□ -0.91
USP53-206ENST00000510737 NAIF1Q69YI7 327 aaPredicted RBP9.37□□□□□ -0.91
USP53-206ENST00000510737 MFSD5Q6N075 450 aa9.37□□□□□ -0.91
USP53-206ENST00000510737 CXorf67Q86X51 503 aaPredicted RBP9.37□□□□□ -0.91
USP53-206ENST00000510737 ZNF276Q8N554 614 aa9.37□□□□□ -0.91
USP53-206ENST00000510737 C7orf31Q8N865 590 aa9.37□□□□□ -0.91
USP53-206ENST00000510737 PIK3C3Q8NEB9 887 aa9.37□□□□□ -0.91
USP53-206ENST00000510737 TOMM22Q9NS69 142 aa9.37□□□□□ -0.91
USP53-206ENST00000510737 SLC52A1Q9NWF4 448 aa9.37□□□□□ -0.91
USP53-206ENST00000510737 ZFYVE9O95405 1425 aa9.37□□□□□ -0.91
USP53-206ENST00000510737 SPHKAPQ2M3C7 1700 aa9.36□□□□□ -0.91
USP53-206ENST00000510737 ADGRB3O60242 1522 aa9.36□□□□□ -0.91
USP53-206ENST00000510737 MTSS1O43312 755 aa9.36□□□□□ -0.91
USP53-206ENST00000510737 ADCY1Q08828 1119 aa9.36□□□□□ -0.91
USP53-206ENST00000510737 PABPC4Q13310 644 aaKnown RBP eCLIP9.36□□□□□ -0.91
USP53-206ENST00000510737 CFAP100Q494V2 611 aa9.36□□□□□ -0.91
USP53-206ENST00000510737 GPR150Q8NGU9 434 aa9.36□□□□□ -0.91
USP53-206ENST00000510737 PPP1R14CQ8TAE6 165 aa9.36□□□□□ -0.91
USP53-206ENST00000510737 ST8SIA2Q92186 375 aa9.36□□□□□ -0.91
USP53-206ENST00000510737 HAS1Q92839 578 aa9.36□□□□□ -0.91
USP53-206ENST00000510737 LENG9Q96B70 501 aa9.36□□□□□ -0.91
USP53-206ENST00000510737 ARL8AQ96BM9 186 aa9.36□□□□□ -0.91
USP53-206ENST00000510737 OSBPL6Q9BZF3 934 aa9.36□□□□□ -0.91
USP53-206ENST00000510737 CEP162Q5TB80 1403 aa9.36□□□□□ -0.91
USP53-206ENST00000510737 ADAMTS13Q76LX8 1427 aa9.36□□□□□ -0.91
USP53-206ENST00000510737 PTPRUQ92729 1446 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms