RNA–Protein interactions for RNA: ENST00000510199.5

RACK1-223, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 1,100 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-223	ENST00000510199	CXCL10	P02778	98 aa		13.06	□□□□□ -0.32
RACK1-223	ENST00000510199	MCF2	P10911	925 aa		13.06	□□□□□ -0.32
RACK1-223	ENST00000510199	RAG1	P15918	1043 aa		13.06	□□□□□ -0.32
RACK1-223	ENST00000510199	ZSCAN20	P17040	1043 aa	Predicted RBP	13.06	□□□□□ -0.32
RACK1-223	ENST00000510199	CYP2J2	P51589	502 aa		13.06	□□□□□ -0.32
RACK1-223	ENST00000510199	GPNMB	Q14956	572 aa		13.06	□□□□□ -0.32
RACK1-223	ENST00000510199	DCAF4L1	Q3SXM0	396 aa		13.06	□□□□□ -0.32
RACK1-223	ENST00000510199	ZNF568	Q3ZCX4	644 aa		13.06	□□□□□ -0.32
RACK1-223	ENST00000510199	PLEKHG4	Q58EX7	1191 aa		13.06	□□□□□ -0.32
RACK1-223	ENST00000510199	FILIP1	Q7Z7B0	1213 aa		13.06	□□□□□ -0.32
RACK1-223	ENST00000510199	XXYLT1	Q8NBI6	393 aa		13.06	□□□□□ -0.32
RACK1-223	ENST00000510199	APBB2	Q92870	758 aa		13.06	□□□□□ -0.32
RACK1-223	ENST00000510199	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.06	□□□□□ -0.32
RACK1-223	ENST00000510199	SCLY	Q96I15	445 aa		13.06	□□□□□ -0.32
RACK1-223	ENST00000510199	MKNK1	Q9BUB5	465 aa		13.06	□□□□□ -0.32
RACK1-223	ENST00000510199	MSTO1	Q9BUK6	570 aa		13.06	□□□□□ -0.32
RACK1-223	ENST00000510199	IFIH1	Q9BYX4	1025 aa	Known RBP	13.06	□□□□□ -0.32
RACK1-223	ENST00000510199	RBSN	Q9H1K0	784 aa		13.06	□□□□□ -0.32
RACK1-223	ENST00000510199	CDT1	Q9H211	546 aa		13.06	□□□□□ -0.32
RACK1-223	ENST00000510199	PCIF1	Q9H4Z3	704 aa		13.06	□□□□□ -0.32
RACK1-223	ENST00000510199	THAP9	Q9H5L6	903 aa		13.06	□□□□□ -0.32
RACK1-223	ENST00000510199	KIAA1586	Q9HCI6	787 aa		13.06	□□□□□ -0.32
RACK1-223	ENST00000510199	FANCL	Q9NW38	375 aa		13.06	□□□□□ -0.32
RACK1-223	ENST00000510199	MAPK13	O15264	365 aa		13.05	□□□□□ -0.32
RACK1-223	ENST00000510199	OGT	O15294	1046 aa		13.05	□□□□□ -0.32
RACK1-223	ENST00000510199	EXTL3	O43909	919 aa		13.05	□□□□□ -0.32
RACK1-223	ENST00000510199	EXOC3	O60645	756 aa		13.05	□□□□□ -0.32
RACK1-223	ENST00000510199	GNA14	O95837	355 aa		13.05	□□□□□ -0.32
RACK1-223	ENST00000510199	TPM4	P67936	248 aa		13.05	□□□□□ -0.32
RACK1-223	ENST00000510199	DSC3	Q14574	896 aa		13.05	□□□□□ -0.32
RACK1-223	ENST00000510199	KYAT1	Q16773	422 aa		13.05	□□□□□ -0.32
RACK1-223	ENST00000510199	CEP135	Q66GS9	1140 aa		13.05	□□□□□ -0.32
RACK1-223	ENST00000510199	MFSD5	Q6N075	450 aa		13.05	□□□□□ -0.32
RACK1-223	ENST00000510199	ZBTB33	Q86T24	672 aa		13.05	□□□□□ -0.32
RACK1-223	ENST00000510199	CDR2L	Q86X02	465 aa	Predicted RBP	13.05	□□□□□ -0.32
RACK1-223	ENST00000510199	FAM114A1	Q8IWE2	563 aa		13.05	□□□□□ -0.32
RACK1-223	ENST00000510199	GPD1L	Q8N335	351 aa		13.05	□□□□□ -0.32
RACK1-223	ENST00000510199	RNF214	Q8ND24	703 aa		13.05	□□□□□ -0.32
RACK1-223	ENST00000510199	SEPT8	Q92599	483 aa		13.05	□□□□□ -0.32
RACK1-223	ENST00000510199	FBXL18	Q96ME1	805 aa		13.05	□□□□□ -0.32
RACK1-223	ENST00000510199	TRAIP	Q9BWF2	469 aa		13.05	□□□□□ -0.32
RACK1-223	ENST00000510199	FTHL17	Q9BXU8	183 aa		13.05	□□□□□ -0.32
RACK1-223	ENST00000510199	HSD3B7	Q9H2F3	369 aa		13.05	□□□□□ -0.32
RACK1-223	ENST00000510199	TMX1	Q9H3N1	280 aa		13.05	□□□□□ -0.32
RACK1-223	ENST00000510199	SAMSN1	Q9NSI8	373 aa	Known RBP	13.05	□□□□□ -0.32
RACK1-223	ENST00000510199	PRKAG2	Q9UGJ0	569 aa		13.05	□□□□□ -0.32
RACK1-223	ENST00000510199	FRMD4B	Q9Y2L6	1034 aa		13.05	□□□□□ -0.32
RACK1-223	ENST00000510199	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	13.05	□□□□□ -0.32
RACK1-223	ENST00000510199	PTPRS	Q13332	1948 aa		13.05	□□□□□ -0.32
RACK1-223	ENST00000510199	SLC16A3	O15427	465 aa	Known RBP	13.04	□□□□□ -0.32
RACK1-223	ENST00000510199	FAM189A1	O60320	539 aa		13.04	□□□□□ -0.32
RACK1-223	ENST00000510199	EVI5	O60447	810 aa		13.04	□□□□□ -0.32
RACK1-223	ENST00000510199	AKAP3	O75969	853 aa		13.04	□□□□□ -0.32
RACK1-223	ENST00000510199	NPTXR	O95502	500 aa		13.04	□□□□□ -0.32
RACK1-223	ENST00000510199	EPB41	P11171	864 aa	Known RBP	13.04	□□□□□ -0.32
RACK1-223	ENST00000510199	HARS	P12081	509 aa	Known RBP	13.04	□□□□□ -0.32
RACK1-223	ENST00000510199	ITGB8	P26012	769 aa		13.04	□□□□□ -0.32
RACK1-223	ENST00000510199	PSMC2	P35998	433 aa	Known RBP	13.04	□□□□□ -0.32
RACK1-223	ENST00000510199	CASP4	P49662	377 aa		13.04	□□□□□ -0.32
RACK1-223	ENST00000510199	MARS	P56192	900 aa	Known RBP	13.04	□□□□□ -0.32
RACK1-223	ENST00000510199	UBXN11	Q5T124	520 aa		13.04	□□□□□ -0.32
RACK1-223	ENST00000510199	CDKAL1	Q5VV42	579 aa		13.04	□□□□□ -0.32
RACK1-223	ENST00000510199	TWF2	Q6IBS0	349 aa	Known RBP	13.04	□□□□□ -0.32
RACK1-223	ENST00000510199	IRF2BP1	Q8IU81	584 aa		13.04	□□□□□ -0.32
RACK1-223	ENST00000510199	C7orf61	Q8IZ16	206 aa		13.04	□□□□□ -0.32
RACK1-223	ENST00000510199	TMEM199	Q8N511	208 aa		13.04	□□□□□ -0.32
RACK1-223	ENST00000510199	DBF4B	Q8NFT6	615 aa		13.04	□□□□□ -0.32
RACK1-223	ENST00000510199	SAAL1	Q96ER3	474 aa		13.04	□□□□□ -0.32
RACK1-223	ENST00000510199	EEF2KMT	Q96G04	330 aa		13.04	□□□□□ -0.32
RACK1-223	ENST00000510199	EIF2A	Q9BY44	585 aa	Known RBP	13.04	□□□□□ -0.32
RACK1-223	ENST00000510199	TRIM6	Q9C030	488 aa	Predicted RBP	13.04	□□□□□ -0.32
RACK1-223	ENST00000510199	GOLGA8IP	A6NC78	632 aa		13.03	□□□□□ -0.32
RACK1-223	ENST00000510199	ZNF233	A6NK53	670 aa		13.03	□□□□□ -0.32
RACK1-223	ENST00000510199	GOLGA8J	A6NMD2	632 aa		13.03	□□□□□ -0.32
RACK1-223	ENST00000510199	MGEA5	O60502	916 aa		13.03	□□□□□ -0.32
RACK1-223	ENST00000510199	ZNF18	P17022	549 aa		13.03	□□□□□ -0.32
RACK1-223	ENST00000510199	EEF1G	P26641	437 aa	Known RBP	13.03	□□□□□ -0.32
RACK1-223	ENST00000510199	GRM5	P41594	1212 aa		13.03	□□□□□ -0.32
RACK1-223	ENST00000510199	RAB27A	P51159	221 aa		13.03	□□□□□ -0.32
RACK1-223	ENST00000510199	POU5F1	Q01860	360 aa	Known RBP	13.03	□□□□□ -0.32
RACK1-223	ENST00000510199	SPAG1	Q07617	926 aa		13.03	□□□□□ -0.32
RACK1-223	ENST00000510199	SNRNP35	Q16560	246 aa	Known RBP	13.03	□□□□□ -0.32
RACK1-223	ENST00000510199	CRELD2	Q6UXH1	353 aa	Predicted RBP	13.03	□□□□□ -0.32
RACK1-223	ENST00000510199	FRMD5	Q7Z6J6	570 aa		13.03	□□□□□ -0.32
RACK1-223	ENST00000510199	FAM186B	Q8IYM0	893 aa		13.03	□□□□□ -0.32
RACK1-223	ENST00000510199	THNSL1	Q8IYQ7	743 aa		13.03	□□□□□ -0.32
RACK1-223	ENST00000510199	RPUSD2	Q8IZ73	545 aa	Known RBP	13.03	□□□□□ -0.32
RACK1-223	ENST00000510199	ZSWIM2	Q8NEG5	633 aa		13.03	□□□□□ -0.32
RACK1-223	ENST00000510199	CNOT6L	Q96LI5	555 aa	Known RBP	13.03	□□□□□ -0.32
RACK1-223	ENST00000510199	ADAM2	Q99965	735 aa		13.03	□□□□□ -0.32
RACK1-223	ENST00000510199	FAM213A	Q9BRX8	229 aa		13.03	□□□□□ -0.32
RACK1-223	ENST00000510199	METTL14	Q9HCE5	456 aa	Known RBP	13.03	□□□□□ -0.32
RACK1-223	ENST00000510199	RGS18	Q9NS28	235 aa		13.03	□□□□□ -0.32
RACK1-223	ENST00000510199	MAGEC2	Q9UBF1	373 aa	Predicted RBP	13.03	□□□□□ -0.32
RACK1-223	ENST00000510199	CPSF3	Q9UKF6	684 aa	Known RBP	13.03	□□□□□ -0.32
RACK1-223	ENST00000510199	KCNJ18	B7U540	433 aa		13.02	□□□□□ -0.33
RACK1-223	ENST00000510199	ZNF623	O75123	536 aa		13.02	□□□□□ -0.33
RACK1-223	ENST00000510199	PFKM	P08237	780 aa		13.02	□□□□□ -0.33
RACK1-223	ENST00000510199	CLTA	P09496	248 aa		13.02	□□□□□ -0.33
RACK1-223	ENST00000510199	STAG3L1	P0CL83	205 aa		13.02	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 203.4 ms