RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 ARFGAP3Q9NP61 516 aa16.1■□□□□ 0.17
PHF3-209ENST00000509330 IGKV6D-21A0A0A0MT36 114 aa16.09■□□□□ 0.17
PHF3-209ENST00000509330 ZNF233A6NK53 670 aa16.09■□□□□ 0.17
PHF3-209ENST00000509330 KRT5P13647 590 aa16.09■□□□□ 0.17
PHF3-209ENST00000509330 CLCN3P51790 818 aa16.09■□□□□ 0.17
PHF3-209ENST00000509330 BMS1Q14692 1282 aaKnown RBP16.09■□□□□ 0.17
PHF3-209ENST00000509330 TXLNBQ8N3L3 684 aa16.09■□□□□ 0.17
PHF3-209ENST00000509330 BRI3BPQ8WY22 251 aa16.09■□□□□ 0.17
PHF3-209ENST00000509330 CEP89Q96ST8 783 aa16.09■□□□□ 0.17
PHF3-209ENST00000509330 MSTO1Q9BUK6 570 aa16.09■□□□□ 0.17
PHF3-209ENST00000509330 KCNK3O14649 394 aa16.09■□□□□ 0.17
PHF3-209ENST00000509330 CELF2O95319 508 aaKnown RBP16.09■□□□□ 0.17
PHF3-209ENST00000509330 ARL2P36404 184 aa16.09■□□□□ 0.17
PHF3-209ENST00000509330 CKAP4Q07065 602 aaKnown RBP16.09■□□□□ 0.17
PHF3-209ENST00000509330 PHLDB2Q86SQ0 1253 aa16.09■□□□□ 0.17
PHF3-209ENST00000509330 DAAM2Q86T65 1068 aa16.09■□□□□ 0.17
PHF3-209ENST00000509330 RNF10Q8N5U6 811 aaKnown RBP16.09■□□□□ 0.17
PHF3-209ENST00000509330 GPRC5AQ8NFJ5 357 aa16.09■□□□□ 0.17
PHF3-209ENST00000509330 ZNF516Q92618 1163 aa16.09■□□□□ 0.17
PHF3-209ENST00000509330 RAB20Q9NX57 234 aa16.09■□□□□ 0.17
PHF3-209ENST00000509330 ARID2Q68CP9 1835 aa16.08■□□□□ 0.17
PHF3-209ENST00000509330 DNAJC25-GNG10A0A024R161 153 aa16.08■□□□□ 0.17
PHF3-209ENST00000509330 N4BP1O75113 896 aaKnown RBP16.08■□□□□ 0.17
PHF3-209ENST00000509330 TNFSF9P41273 254 aa16.08■□□□□ 0.17
PHF3-209ENST00000509330 LONRF2Q1L5Z9 754 aa16.08■□□□□ 0.17
PHF3-209ENST00000509330 TMEM132AQ24JP5 1023 aa16.08■□□□□ 0.17
PHF3-209ENST00000509330 PNMA8AQ86V59 439 aaPredicted RBP16.08■□□□□ 0.17
PHF3-209ENST00000509330 FBXL13Q8NEE6 735 aa16.08■□□□□ 0.17
PHF3-209ENST00000509330 TMEM8AQ9HCN3 771 aa16.08■□□□□ 0.17
PHF3-209ENST00000509330 LOC285556D6RIA3 1793 aa16.08■□□□□ 0.17
PHF3-209ENST00000509330 TMEM110-MUSTN1A8MSY1 372 aa16.08■□□□□ 0.16
PHF3-209ENST00000509330 ZNF286BP0CG31 522 aa16.08■□□□□ 0.16
PHF3-209ENST00000509330 NAMPTP43490 491 aa16.08■□□□□ 0.16
PHF3-209ENST00000509330 MKRN4PQ13434 485 aaPredicted RBP16.08■□□□□ 0.16
PHF3-209ENST00000509330 MPHOSPH6Q99547 160 aaKnown RBP16.08■□□□□ 0.16
PHF3-209ENST00000509330 AGPAT1Q99943 283 aa16.08■□□□□ 0.16
PHF3-209ENST00000509330 RNPEPQ9H4A4 650 aa16.08■□□□□ 0.16
PHF3-209ENST00000509330 RBAKQ9NYW8 714 aaPredicted RBP16.08■□□□□ 0.16
PHF3-209ENST00000509330 A0A0G2JMZ2 1700 aa16.08■□□□□ 0.16
PHF3-209ENST00000509330 TBC1D8O95759 1140 aa16.08■□□□□ 0.16
PHF3-209ENST00000509330 TGFB3P10600 412 aa16.08■□□□□ 0.16
PHF3-209ENST00000509330 ADCYAP1R1P41586 468 aa16.08■□□□□ 0.16
PHF3-209ENST00000509330 PLCB4Q15147 1175 aa16.08■□□□□ 0.16
PHF3-209ENST00000509330 NOP9Q86U38 636 aaKnown RBP16.08■□□□□ 0.16
PHF3-209ENST00000509330 TMEM130Q8N3G9 435 aa16.08■□□□□ 0.16
PHF3-209ENST00000509330 SPATA4Q8NEY3 305 aa16.08■□□□□ 0.16
PHF3-209ENST00000509330 HVCN1Q96D96 273 aa16.08■□□□□ 0.16
PHF3-209ENST00000509330 LRRC1Q9BTT6 524 aa16.08■□□□□ 0.16
PHF3-209ENST00000509330 NIFKQ9BYG3 293 aaKnown RBP16.08■□□□□ 0.16
PHF3-209ENST00000509330 MROH8Q9H579 483 aa16.08■□□□□ 0.16
PHF3-209ENST00000509330 RBM12Q9NTZ6 932 aaKnown RBP16.08■□□□□ 0.16
PHF3-209ENST00000509330 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.07■□□□□ 0.16
PHF3-209ENST00000509330 ZRANB2O95218 330 aaKnown RBP eCLIP16.07■□□□□ 0.16
PHF3-209ENST00000509330 MMEP08473 750 aa16.07■□□□□ 0.16
PHF3-209ENST00000509330 TCP1P17987 556 aaKnown RBP16.07■□□□□ 0.16
PHF3-209ENST00000509330 TARBP2Q15633 366 aaKnown RBP16.07■□□□□ 0.16
PHF3-209ENST00000509330 C2CD6Q53TS8 623 aa16.07■□□□□ 0.16
PHF3-209ENST00000509330 SLC30A5Q8TAD4 765 aa16.07■□□□□ 0.16
PHF3-209ENST00000509330 SLC35G2Q8TBE7 412 aa16.07■□□□□ 0.16
PHF3-209ENST00000509330 CTNNBL1Q8WYA6 563 aaPredicted RBP16.07■□□□□ 0.16
PHF3-209ENST00000509330 MS4A4AQ96JQ5 239 aa16.07■□□□□ 0.16
PHF3-209ENST00000509330 MFSD14AQ96MC6 490 aa16.07■□□□□ 0.16
PHF3-209ENST00000509330 NT5C1BQ96P26 610 aa16.07■□□□□ 0.16
PHF3-209ENST00000509330 PCDHGC5Q9Y5F6 944 aa16.07■□□□□ 0.16
PHF3-209ENST00000509330 TPCN2Q8NHX9 752 aa16.07■□□□□ 0.16
PHF3-209ENST00000509330 PCDHB18PQ96TA0 734 aa16.07■□□□□ 0.16
PHF3-209ENST00000509330 OGFRQ9NZT2 677 aa16.07■□□□□ 0.16
PHF3-209ENST00000509330 PNMA3Q9UL41 463 aa16.07■□□□□ 0.16
PHF3-209ENST00000509330 INO80B-WBP1J3KQ70 363 aa16.06■□□□□ 0.16
PHF3-209ENST00000509330 EXTL3O43909 919 aa16.06■□□□□ 0.16
PHF3-209ENST00000509330 PAFAH1B1P43034 410 aa16.06■□□□□ 0.16
PHF3-209ENST00000509330 RTP1P59025 263 aa16.06■□□□□ 0.16
PHF3-209ENST00000509330 LAMTOR4Q0VGL1 99 aa16.06■□□□□ 0.16
PHF3-209ENST00000509330 TTLL4Q14679 1199 aa16.06■□□□□ 0.16
PHF3-209ENST00000509330 MEI1Q5TIA1 1274 aa16.06■□□□□ 0.16
PHF3-209ENST00000509330 CRELD2Q6UXH1 353 aaPredicted RBP16.06■□□□□ 0.16
PHF3-209ENST00000509330 MSANTD4Q8NCY6 345 aa16.06■□□□□ 0.16
PHF3-209ENST00000509330 HELQQ8TDG4 1101 aa16.06■□□□□ 0.16
PHF3-209ENST00000509330 FBXL18Q96ME1 805 aa16.06■□□□□ 0.16
PHF3-209ENST00000509330 INO80BQ9C086 356 aaPredicted RBP16.06■□□□□ 0.16
PHF3-209ENST00000509330 GBA2Q9HCG7 927 aaPredicted RBP16.06■□□□□ 0.16
PHF3-209ENST00000509330 IVNS1ABPQ9Y6Y0 642 aa16.06■□□□□ 0.16
PHF3-209ENST00000509330 ZBTB42B2RXF5 422 aa16.06■□□□□ 0.16
PHF3-209ENST00000509330 B4GALT5O43286 388 aa16.06■□□□□ 0.16
PHF3-209ENST00000509330 MAFO75444 373 aaPredicted RBP16.06■□□□□ 0.16
PHF3-209ENST00000509330 FTLP02792 175 aaPredicted RBP16.06■□□□□ 0.16
PHF3-209ENST00000509330 GARTP22102 1010 aa16.06■□□□□ 0.16
PHF3-209ENST00000509330 PIK3CAP42336 1068 aa16.06■□□□□ 0.16
PHF3-209ENST00000509330 PRPF4BQ13523 1007 aaKnown RBP16.06■□□□□ 0.16
PHF3-209ENST00000509330 TDRD10Q5VZ19 366 aaKnown RBP16.06■□□□□ 0.16
PHF3-209ENST00000509330 CCDC62Q6P9F0 684 aa16.06■□□□□ 0.16
PHF3-209ENST00000509330 OR5B17Q8NGF7 314 aa16.06■□□□□ 0.16
PHF3-209ENST00000509330 MYBL2P10244 700 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 RPS6KA1Q15418 735 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 PEX26Q7Z412 305 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 DPP9Q86TI2 863 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 CEP120Q8N960 986 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 EPS8L1Q8TE68 723 aa16.05■□□□□ 0.16
PHF3-209ENST00000509330 PSPC1Q8WXF1 523 aaKnown RBP16.05■□□□□ 0.16
PHF3-209ENST00000509330 TAF4BQ92750 862 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 316.3 ms