RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 CHST7Q9NS84 486 aa17.83■□□□□ 0.44
CXCL1-202ENST00000509101 ZDHHC7Q9NXF8 308 aa17.83■□□□□ 0.44
CXCL1-202ENST00000509101 DLGAP2Q9P1A6 1054 aa17.83■□□□□ 0.44
CXCL1-202ENST00000509101 SIT1Q9Y3P8 196 aa17.83■□□□□ 0.44
CXCL1-202ENST00000509101 NUMBLQ9Y6R0 609 aa17.83■□□□□ 0.44
CXCL1-202ENST00000509101 NCOR2Q9Y618 2525 aa17.82■□□□□ 0.44
CXCL1-202ENST00000509101 ASAP2O43150 1006 aa17.82■□□□□ 0.44
CXCL1-202ENST00000509101 GAS2O43903 313 aaKnown RBP17.82■□□□□ 0.44
CXCL1-202ENST00000509101 NR1I2O75469 434 aa17.82■□□□□ 0.44
CXCL1-202ENST00000509101 SP9P0CG40 484 aa17.82■□□□□ 0.44
CXCL1-202ENST00000509101 RPL17P18621 184 aaKnown RBP17.82■□□□□ 0.44
CXCL1-202ENST00000509101 EVCP57679 992 aa17.82■□□□□ 0.44
CXCL1-202ENST00000509101 XKR9Q5GH70 373 aa17.82■□□□□ 0.44
CXCL1-202ENST00000509101 DCLRE1AQ6PJP8 1040 aa17.82■□□□□ 0.44
CXCL1-202ENST00000509101 POTEGQ6S5H5 508 aa17.82■□□□□ 0.44
CXCL1-202ENST00000509101 DGLUCYQ7Z3D6 616 aa17.82■□□□□ 0.44
CXCL1-202ENST00000509101 CCDC51Q96ER9 411 aa17.82■□□□□ 0.44
CXCL1-202ENST00000509101 FAM20AQ96MK3 541 aa17.82■□□□□ 0.44
CXCL1-202ENST00000509101 MTRQ99707 1265 aa17.82■□□□□ 0.44
CXCL1-202ENST00000509101 COLEC11Q9BWP8 271 aa17.82■□□□□ 0.44
CXCL1-202ENST00000509101 GPR62Q9BZJ7 368 aa17.82■□□□□ 0.44
CXCL1-202ENST00000509101 PRKD2Q9BZL6 878 aa17.82■□□□□ 0.44
CXCL1-202ENST00000509101 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.82■□□□□ 0.44
CXCL1-202ENST00000509101 RGL1Q9NZL6 768 aa17.82■□□□□ 0.44
CXCL1-202ENST00000509101 VWA8A3KMH1 1905 aa17.82■□□□□ 0.44
CXCL1-202ENST00000509101 POTEMA6NI47 508 aa17.81■□□□□ 0.44
CXCL1-202ENST00000509101 ANHXE9PGG2 379 aa17.81■□□□□ 0.44
CXCL1-202ENST00000509101 INO80B-WBP1J3KQ70 363 aa17.81■□□□□ 0.44
CXCL1-202ENST00000509101 CPLX1O14810 134 aa17.81■□□□□ 0.44
CXCL1-202ENST00000509101 PAPLNO95428 1278 aa17.81■□□□□ 0.44
CXCL1-202ENST00000509101 PSMA5P28066 241 aa17.81■□□□□ 0.44
CXCL1-202ENST00000509101 AXLP30530 894 aa17.81■□□□□ 0.44
CXCL1-202ENST00000509101 CYP4A11Q02928 519 aa17.81■□□□□ 0.44
CXCL1-202ENST00000509101 TOB2Q14106 344 aaPredicted RBP17.81■□□□□ 0.44
CXCL1-202ENST00000509101 USP41Q3LFD5 358 aa17.81■□□□□ 0.44
CXCL1-202ENST00000509101 NCAPH2Q6IBW4 605 aa17.81■□□□□ 0.44
CXCL1-202ENST00000509101 C1orf210Q8IVY1 113 aa17.81■□□□□ 0.44
CXCL1-202ENST00000509101 C4orf19Q8IY42 314 aa17.81■□□□□ 0.44
CXCL1-202ENST00000509101 PJA1Q8NG27 643 aa17.81■□□□□ 0.44
CXCL1-202ENST00000509101 RABGGTAQ92696 567 aa17.81■□□□□ 0.44
CXCL1-202ENST00000509101 DYDC2Q96IM9 177 aa17.81■□□□□ 0.44
CXCL1-202ENST00000509101 TRIM6Q9C030 488 aaPredicted RBP17.81■□□□□ 0.44
CXCL1-202ENST00000509101 CSRNP2Q9H175 543 aa17.81■□□□□ 0.44
CXCL1-202ENST00000509101 XPNPEP1Q9NQW7 623 aa17.81■□□□□ 0.44
CXCL1-202ENST00000509101 SLC2A4RGQ9NR83 387 aa17.81■□□□□ 0.44
CXCL1-202ENST00000509101 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.81■□□□□ 0.44
CXCL1-202ENST00000509101 ADAM28Q9UKQ2 775 aa17.81■□□□□ 0.44
CXCL1-202ENST00000509101 KCNJ14Q9UNX9 436 aa17.81■□□□□ 0.44
CXCL1-202ENST00000509101 CCDC194A0A1B0GVG4 234 aa17.8■□□□□ 0.44
CXCL1-202ENST00000509101 ZBTB39O15060 712 aa17.8■□□□□ 0.44
CXCL1-202ENST00000509101 LRRN2O75325 713 aa17.8■□□□□ 0.44
CXCL1-202ENST00000509101 GLULP15104 373 aa17.8■□□□□ 0.44
CXCL1-202ENST00000509101 AKAP5P24588 427 aa17.8■□□□□ 0.44
CXCL1-202ENST00000509101 PTENP60484 403 aa17.8■□□□□ 0.44
CXCL1-202ENST00000509101 CTTNQ14247 550 aaKnown RBP17.8■□□□□ 0.44
CXCL1-202ENST00000509101 EPHA7Q15375 998 aa17.8■□□□□ 0.44
CXCL1-202ENST00000509101 GALNT17Q6IS24 598 aa17.8■□□□□ 0.44
CXCL1-202ENST00000509101 OTUD6AQ7L8S5 288 aa17.8■□□□□ 0.44
CXCL1-202ENST00000509101 FNIP2Q9P278 1114 aa17.8■□□□□ 0.44
CXCL1-202ENST00000509101 CACNG4Q9UBN1 327 aa17.8■□□□□ 0.44
CXCL1-202ENST00000509101 GIT1Q9Y2X7 761 aa17.8■□□□□ 0.44
CXCL1-202ENST00000509101 MARCH6O60337 910 aa17.79■□□□□ 0.44
CXCL1-202ENST00000509101 CCNT1O60563 726 aaKnown RBP17.79■□□□□ 0.44
CXCL1-202ENST00000509101 ZMYND10O75800 440 aa17.79■□□□□ 0.44
CXCL1-202ENST00000509101 GCFC2P16383 781 aaKnown RBP17.79■□□□□ 0.44
CXCL1-202ENST00000509101 ARF4P18085 180 aaPredicted RBP17.79■□□□□ 0.44
CXCL1-202ENST00000509101 FSHRP23945 695 aa17.79■□□□□ 0.44
CXCL1-202ENST00000509101 CREMQ03060 361 aa17.79■□□□□ 0.44
CXCL1-202ENST00000509101 MBTD1Q05BQ5 628 aa17.79■□□□□ 0.44
CXCL1-202ENST00000509101 NCBP1Q09161 790 aaKnown RBP17.79■□□□□ 0.44
CXCL1-202ENST00000509101 STK3Q13188 491 aa17.79■□□□□ 0.44
CXCL1-202ENST00000509101 CAPSQ13938 189 aa17.79■□□□□ 0.44
CXCL1-202ENST00000509101 TFDP1Q14186 410 aa17.79■□□□□ 0.44
CXCL1-202ENST00000509101 PCBP1Q15365 356 aaKnown RBP eCLIP17.79■□□□□ 0.44
CXCL1-202ENST00000509101 AMHR2Q16671 573 aa17.79■□□□□ 0.44
CXCL1-202ENST00000509101 LILRA6Q6PI73 481 aa17.79■□□□□ 0.44
CXCL1-202ENST00000509101 PRSS55Q6UWB4 352 aaPredicted RBP17.79■□□□□ 0.44
CXCL1-202ENST00000509101 NEK8Q86SG6 692 aa17.79■□□□□ 0.44
CXCL1-202ENST00000509101 CDR2LQ86X02 465 aaPredicted RBP17.79■□□□□ 0.44
CXCL1-202ENST00000509101 POTEDQ86YR6 584 aa17.79■□□□□ 0.44
CXCL1-202ENST00000509101 HACE1Q8IYU2 909 aa17.79■□□□□ 0.44
CXCL1-202ENST00000509101 DCLK2Q8N568 766 aa17.79■□□□□ 0.44
CXCL1-202ENST00000509101 ASAP3Q8TDY4 903 aa17.79■□□□□ 0.44
CXCL1-202ENST00000509101 RUBCNQ92622 972 aa17.79■□□□□ 0.44
CXCL1-202ENST00000509101 HAS1Q92839 578 aa17.79■□□□□ 0.44
CXCL1-202ENST00000509101 FGF14Q92915 247 aa17.79■□□□□ 0.44
CXCL1-202ENST00000509101 LARP6Q9BRS8 491 aaKnown RBP17.79■□□□□ 0.44
CXCL1-202ENST00000509101 KLK14Q9P0G3 267 aa17.79■□□□□ 0.44
CXCL1-202ENST00000509101 GPR179Q6PRD1 2367 aa17.78■□□□□ 0.44
CXCL1-202ENST00000509101 B4GALT5O43286 388 aa17.78■□□□□ 0.44
CXCL1-202ENST00000509101 NPTXRO95502 500 aa17.78■□□□□ 0.44
CXCL1-202ENST00000509101 C1RP00736 705 aa17.78■□□□□ 0.44
CXCL1-202ENST00000509101 NTHL1P78549 312 aa17.78■□□□□ 0.44
CXCL1-202ENST00000509101 GRIK3Q13003 919 aa17.78■□□□□ 0.44
CXCL1-202ENST00000509101 MXD4Q14582 209 aaPredicted RBP17.78■□□□□ 0.44
CXCL1-202ENST00000509101 PUM1Q14671 1186 aaKnown RBP eCLIP17.78■□□□□ 0.44
CXCL1-202ENST00000509101 RTP2Q5QGT7 225 aa17.78■□□□□ 0.44
CXCL1-202ENST00000509101 PPP4R3AQ6IN85 833 aa17.78■□□□□ 0.44
CXCL1-202ENST00000509101 PARM1Q6UWI2 310 aa17.78■□□□□ 0.44
CXCL1-202ENST00000509101 CENPQQ7L2Z9 268 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms