RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 RNF168Q8IYW5 571 aaPredicted RBP13.84□□□□□ -0.19
PDPN-208ENST00000509009 FEZF2Q8TBJ5 459 aa13.84□□□□□ -0.19
PDPN-208ENST00000509009 BSNDQ8WZ55 320 aa13.84□□□□□ -0.19
PDPN-208ENST00000509009 PRIMPOLQ96LW4 560 aa13.84□□□□□ -0.19
PDPN-208ENST00000509009 FBXL18Q96ME1 805 aa13.84□□□□□ -0.19
PDPN-208ENST00000509009 RPS6KC1Q96S38 1066 aa13.84□□□□□ -0.19
PDPN-208ENST00000509009 COLEC11Q9BWP8 271 aa13.84□□□□□ -0.19
PDPN-208ENST00000509009 KCNH6Q9H252 994 aa13.84□□□□□ -0.19
PDPN-208ENST00000509009 POLD4Q9HCU8 107 aa13.84□□□□□ -0.19
PDPN-208ENST00000509009 TSHZ2Q9NRE2 1034 aa13.84□□□□□ -0.19
PDPN-208ENST00000509009 PRMT7Q9NVM4 692 aaPredicted RBP13.84□□□□□ -0.19
PDPN-208ENST00000509009 KLK14Q9P0G3 267 aa13.84□□□□□ -0.19
PDPN-208ENST00000509009 ZNF318Q5VUA4 2279 aa13.84□□□□□ -0.19
PDPN-208ENST00000509009 WDFY4Q6ZS81 3184 aa13.83□□□□□ -0.19
PDPN-208ENST00000509009 MYO10Q9HD67 2058 aa13.83□□□□□ -0.2
PDPN-208ENST00000509009 ARHGEF35A5YM69 484 aa13.83□□□□□ -0.2
PDPN-208ENST00000509009 C2CD2LO14523 706 aa13.83□□□□□ -0.2
PDPN-208ENST00000509009 NR1I2O75469 434 aa13.83□□□□□ -0.2
PDPN-208ENST00000509009 CENPBP07199 599 aaPredicted RBP13.83□□□□□ -0.2
PDPN-208ENST00000509009 CCT6AP40227 531 aaKnown RBP13.83□□□□□ -0.2
PDPN-208ENST00000509009 GNL2Q13823 731 aaKnown RBP13.83□□□□□ -0.2
PDPN-208ENST00000509009 KIAA1841Q6NSI8 718 aa13.83□□□□□ -0.2
PDPN-208ENST00000509009 GPR149Q86SP6 731 aa13.83□□□□□ -0.2
PDPN-208ENST00000509009 ASIC4Q96FT7 647 aa13.83□□□□□ -0.2
PDPN-208ENST00000509009 HERC2P3Q9BVR0 1158 aa13.83□□□□□ -0.2
PDPN-208ENST00000509009 C2orf40Q9H1Z8 148 aa13.83□□□□□ -0.2
PDPN-208ENST00000509009 RXFP1Q9HBX9 757 aa13.83□□□□□ -0.2
PDPN-208ENST00000509009 CHST7Q9NS84 486 aa13.83□□□□□ -0.2
PDPN-208ENST00000509009 LRWD1Q9UFC0 647 aa13.83□□□□□ -0.2
PDPN-208ENST00000509009 PARP2Q9UGN5 583 aa13.83□□□□□ -0.2
PDPN-208ENST00000509009 NOL7Q9UMY1 257 aaKnown RBP13.83□□□□□ -0.2
PDPN-208ENST00000509009 SSX2IPQ9Y2D8 614 aa13.83□□□□□ -0.2
PDPN-208ENST00000509009 USP20Q9Y2K6 914 aa13.83□□□□□ -0.2
PDPN-208ENST00000509009 ACKR2O00590 384 aa13.82□□□□□ -0.2
PDPN-208ENST00000509009 TEX28O15482 410 aa13.82□□□□□ -0.2
PDPN-208ENST00000509009 URODP06132 367 aa13.82□□□□□ -0.2
PDPN-208ENST00000509009 DSG1Q02413 1049 aa13.82□□□□□ -0.2
PDPN-208ENST00000509009 PTGDRQ13258 359 aa13.82□□□□□ -0.2
PDPN-208ENST00000509009 ZBTB8OSQ8IWT0 167 aa13.82□□□□□ -0.2
PDPN-208ENST00000509009 ZDHHC14Q8IZN3 488 aa13.82□□□□□ -0.2
PDPN-208ENST00000509009 FBXL6Q8N531 539 aa13.82□□□□□ -0.2
PDPN-208ENST00000509009 KREMEN2Q8NCW0 462 aa13.82□□□□□ -0.2
PDPN-208ENST00000509009 GPR62Q9BZJ7 368 aa13.82□□□□□ -0.2
PDPN-208ENST00000509009 PDZD7Q9H5P4 517 aa13.82□□□□□ -0.2
PDPN-208ENST00000509009 LIMD1Q9UGP4 676 aa13.82□□□□□ -0.2
PDPN-208ENST00000509009 KIAA1024Q9UPX6 916 aa13.82□□□□□ -0.2
PDPN-208ENST00000509009 PCDHB6Q9Y5E3 794 aa13.82□□□□□ -0.2
PDPN-208ENST00000509009 ARID2Q68CP9 1835 aa13.82□□□□□ -0.2
PDPN-208ENST00000509009 N4BP3O15049 544 aa13.81□□□□□ -0.2
PDPN-208ENST00000509009 NAMPTP43490 491 aa13.81□□□□□ -0.2
PDPN-208ENST00000509009 GLUD2P49448 558 aa13.81□□□□□ -0.2
PDPN-208ENST00000509009 PRPF4BQ13523 1007 aaKnown RBP13.81□□□□□ -0.2
PDPN-208ENST00000509009 IL17AQ16552 155 aa13.81□□□□□ -0.2
PDPN-208ENST00000509009 MAPK6Q16659 721 aa13.81□□□□□ -0.2
PDPN-208ENST00000509009 IER5LQ5T953 404 aa13.81□□□□□ -0.2
PDPN-208ENST00000509009 HAUS3Q68CZ6 603 aa13.81□□□□□ -0.2
PDPN-208ENST00000509009 ZBTB33Q86T24 672 aa13.81□□□□□ -0.2
PDPN-208ENST00000509009 PLCD3Q8N3E9 789 aa13.81□□□□□ -0.2
PDPN-208ENST00000509009 IGSF22Q8N9C0 903 aa13.81□□□□□ -0.2
PDPN-208ENST00000509009 DEPTORQ8TB45 409 aa13.81□□□□□ -0.2
PDPN-208ENST00000509009 RABGGTAQ92696 567 aa13.81□□□□□ -0.2
PDPN-208ENST00000509009 CCDC113Q9H0I3 377 aa13.81□□□□□ -0.2
PDPN-208ENST00000509009 BHMT2Q9H2M3 363 aa13.81□□□□□ -0.2
PDPN-208ENST00000509009 SFXN1Q9H9B4 322 aa13.81□□□□□ -0.2
PDPN-208ENST00000509009 SNTG2Q9NY99 539 aa13.81□□□□□ -0.2
PDPN-208ENST00000509009 USTQ9Y2C2 406 aa13.81□□□□□ -0.2
PDPN-208ENST00000509009 TADA2AO75478 443 aa13.8□□□□□ -0.2
PDPN-208ENST00000509009 EDN1P05305 212 aa13.8□□□□□ -0.2
PDPN-208ENST00000509009 PRKCBP05771 671 aa13.8□□□□□ -0.2
PDPN-208ENST00000509009 ADH1AP07327 375 aa13.8□□□□□ -0.2
PDPN-208ENST00000509009 LIG1P18858 919 aa13.8□□□□□ -0.2
PDPN-208ENST00000509009 NHLH1Q02575 133 aa13.8□□□□□ -0.2
PDPN-208ENST00000509009 GRIK3Q13003 919 aa13.8□□□□□ -0.2
PDPN-208ENST00000509009 PPP2R5AQ15172 486 aa13.8□□□□□ -0.2
PDPN-208ENST00000509009 RABEP1Q15276 862 aa13.8□□□□□ -0.2
PDPN-208ENST00000509009 USP41Q3LFD5 358 aa13.8□□□□□ -0.2
PDPN-208ENST00000509009 NT5DC1Q5TFE4 455 aa13.8□□□□□ -0.2
PDPN-208ENST00000509009 EEF1DP3Q658K8 133 aa13.8□□□□□ -0.2
PDPN-208ENST00000509009 FUT10Q6P4F1 479 aa13.8□□□□□ -0.2
PDPN-208ENST00000509009 GPR65Q8IYL9 337 aa13.8□□□□□ -0.2
PDPN-208ENST00000509009 CMASQ8NFW8 434 aaPredicted RBP13.8□□□□□ -0.2
PDPN-208ENST00000509009 KIFAP3Q92845 792 aa13.8□□□□□ -0.2
PDPN-208ENST00000509009 B3GALT6Q96L58 329 aa13.8□□□□□ -0.2
PDPN-208ENST00000509009 IFT74Q96LB3 600 aa13.8□□□□□ -0.2
PDPN-208ENST00000509009 CXCL16Q9H2A7 254 aa13.8□□□□□ -0.2
PDPN-208ENST00000509009 DDX19AQ9NUU7 478 aaKnown RBP13.8□□□□□ -0.2
PDPN-208ENST00000509009 ADAM28Q9UKQ2 775 aa13.8□□□□□ -0.2
PDPN-208ENST00000509009 SORCS3Q9UPU3 1222 aa13.8□□□□□ -0.2
PDPN-208ENST00000509009 STK24Q9Y6E0 443 aa13.8□□□□□ -0.2
PDPN-208ENST00000509009 ZMYM2Q9UBW7 1377 aa13.8□□□□□ -0.2
PDPN-208ENST00000509009 CCDC195A0A1B0GUA6 201 aa13.79□□□□□ -0.2
PDPN-208ENST00000509009 SPDYE4A6NLX3 237 aa13.79□□□□□ -0.2
PDPN-208ENST00000509009 PTGESO14684 152 aa13.79□□□□□ -0.2
PDPN-208ENST00000509009 BRD1O95696 1058 aa13.79□□□□□ -0.2
PDPN-208ENST00000509009 C1RP00736 705 aa13.79□□□□□ -0.2
PDPN-208ENST00000509009 ASGR2P07307 311 aa13.79□□□□□ -0.2
PDPN-208ENST00000509009 SPATA31D3P0C874 917 aa13.79□□□□□ -0.2
PDPN-208ENST00000509009 CDC25AP30304 524 aa13.79□□□□□ -0.2
PDPN-208ENST00000509009 EFNA5P52803 228 aa13.79□□□□□ -0.2
PDPN-208ENST00000509009 TUSC3Q13454 348 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms