RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 TIGD7Q6NT04 549 aaPredicted RBP5.59□□□□□ -1.51
PDLIM5-211ENST00000508531 PCSK4Q6UW60 755 aa5.59□□□□□ -1.51
PDLIM5-211ENST00000508531 CMTM4Q8IZR5 234 aa5.59□□□□□ -1.51
PDLIM5-211ENST00000508531 MRFAP1L1Q96HT8 127 aa5.59□□□□□ -1.51
PDLIM5-211ENST00000508531 UIMC1Q96RL1 719 aa5.59□□□□□ -1.51
PDLIM5-211ENST00000508531 MNTQ99583 582 aa5.59□□□□□ -1.51
PDLIM5-211ENST00000508531 PRRX2Q99811 253 aa5.59□□□□□ -1.51
PDLIM5-211ENST00000508531 RRAGDQ9NQL2 400 aaPredicted RBP5.59□□□□□ -1.51
PDLIM5-211ENST00000508531 NAP1L2Q9ULW6 460 aaPredicted RBP5.59□□□□□ -1.51
PDLIM5-211ENST00000508531 SPO11Q9Y5K1 396 aa5.59□□□□□ -1.51
PDLIM5-211ENST00000508531 MLH3Q9UHC1 1453 aa5.58□□□□□ -1.52
PDLIM5-211ENST00000508531 TNRQ92752 1358 aa5.58□□□□□ -1.52
PDLIM5-211ENST00000508531 JCADQ9P266 1359 aa5.58□□□□□ -1.52
PDLIM5-211ENST00000508531 A0A0A6YYK5 440 aaPredicted RBP5.58□□□□□ -1.52
PDLIM5-211ENST00000508531 DYNC1I1O14576 645 aa5.58□□□□□ -1.52
PDLIM5-211ENST00000508531 OPHN1O60890 802 aa5.58□□□□□ -1.52
PDLIM5-211ENST00000508531 ATP2A2P16615 1042 aaKnown RBP5.58□□□□□ -1.52
PDLIM5-211ENST00000508531 PTGS2P35354 604 aa5.58□□□□□ -1.52
PDLIM5-211ENST00000508531 FSTL1Q12841 308 aa5.58□□□□□ -1.52
PDLIM5-211ENST00000508531 SPIDRQ14159 915 aa5.58□□□□□ -1.52
PDLIM5-211ENST00000508531 RABL3Q5HYI8 236 aa5.58□□□□□ -1.52
PDLIM5-211ENST00000508531 KIAA1841Q6NSI8 718 aa5.58□□□□□ -1.52
PDLIM5-211ENST00000508531 RPUSD2Q8IZ73 545 aaKnown RBP5.58□□□□□ -1.52
PDLIM5-211ENST00000508531 SLC25A43Q8WUT9 341 aaPredicted RBP5.58□□□□□ -1.52
PDLIM5-211ENST00000508531 ZG16BQ96DA0 208 aa5.58□□□□□ -1.52
PDLIM5-211ENST00000508531 NOL10Q9BSC4 688 aaKnown RBP5.58□□□□□ -1.52
PDLIM5-211ENST00000508531 SOX7Q9BT81 388 aa5.58□□□□□ -1.52
PDLIM5-211ENST00000508531 KRTAP9-8Q9BYQ0 159 aa5.58□□□□□ -1.52
PDLIM5-211ENST00000508531 TSPYL1Q9H0U9 437 aa5.58□□□□□ -1.52
PDLIM5-211ENST00000508531 BCCIPQ9P287 314 aaKnown RBP eCLIP5.58□□□□□ -1.52
PDLIM5-211ENST00000508531 ZNF142P52746 1687 aaPredicted RBP5.58□□□□□ -1.52
PDLIM5-211ENST00000508531 KDM5CP41229 1560 aa5.58□□□□□ -1.52
PDLIM5-211ENST00000508531 CCDC18Q5T9S5 1454 aa5.58□□□□□ -1.52
PDLIM5-211ENST00000508531 SPAG9O60271 1321 aaKnown RBP5.57□□□□□ -1.52
PDLIM5-211ENST00000508531 RNF17Q9BXT8 1623 aaKnown RBP5.57□□□□□ -1.52
PDLIM5-211ENST00000508531 FSD2A1L4K1 749 aa5.57□□□□□ -1.52
PDLIM5-211ENST00000508531 GOLGA6L6A8MZA4 724 aa5.57□□□□□ -1.52
PDLIM5-211ENST00000508531 MAFGO15525 162 aa5.57□□□□□ -1.52
PDLIM5-211ENST00000508531 IPO13O94829 963 aaKnown RBP5.57□□□□□ -1.52
PDLIM5-211ENST00000508531 DMTNQ08495 405 aa5.57□□□□□ -1.52
PDLIM5-211ENST00000508531 FAM214AQ32MH5 1076 aa5.57□□□□□ -1.52
PDLIM5-211ENST00000508531 HTR3DQ70Z44 454 aa5.57□□□□□ -1.52
PDLIM5-211ENST00000508531 MRGPREQ86SM8 312 aa5.57□□□□□ -1.52
PDLIM5-211ENST00000508531 DNAJC10Q8IXB1 793 aa5.57□□□□□ -1.52
PDLIM5-211ENST00000508531 MDGA1Q8NFP4 955 aa5.57□□□□□ -1.52
PDLIM5-211ENST00000508531 HAS1Q92839 578 aa5.57□□□□□ -1.52
PDLIM5-211ENST00000508531 PRKRIP1Q9H875 184 aaPredicted RBP5.57□□□□□ -1.52
PDLIM5-211ENST00000508531 ZMAT4Q9H898 229 aa5.57□□□□□ -1.52
PDLIM5-211ENST00000508531 UPF2Q9HAU5 1272 aaKnown RBP5.57□□□□□ -1.52
PDLIM5-211ENST00000508531 ING3Q9NXR8 418 aa5.57□□□□□ -1.52
PDLIM5-211ENST00000508531 TRPS1Q9UHF7 1281 aa5.57□□□□□ -1.52
PDLIM5-211ENST00000508531 ZKSCAN5Q9Y2L8 839 aa5.57□□□□□ -1.52
PDLIM5-211ENST00000508531 ABCC1P33527 1531 aa5.57□□□□□ -1.52
PDLIM5-211ENST00000508531 PLEKHH2Q8IVE3 1493 aa5.57□□□□□ -1.52
PDLIM5-211ENST00000508531 ROCK2O75116 1388 aaKnown RBP5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 LRP6O75581 1613 aa5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 AFF2P51816 1311 aa5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 REREQ9P2R6 1566 aa5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 TMEM191CA6NGB0 347 aa5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 FOXN1O15353 648 aa5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 MTSS1O43312 755 aa5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 FSBPO95073 299 aa5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 PCDH8O95206 1070 aa5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 GNAT2P19087 354 aa5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 HK1P19367 917 aa5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 YY1P25490 414 aa5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 MSNP26038 577 aaKnown RBP5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 MCM5P33992 734 aa5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 SLC20A2Q08357 652 aa5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 MAN2A1Q16706 1144 aa5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 LAIR1Q6GTX8 287 aa5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 CENPQQ7L2Z9 268 aaPredicted RBP5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 FTSJ3Q8IY81 847 aaKnown RBP5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 ZZZ3Q8IYH5 903 aa5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 NXPE1Q8N323 547 aa5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 ZNF276Q8N554 614 aa5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 ST8SIA2Q92186 375 aa5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 HIST1H2AHQ96KK5 128 aa5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 HIST1H2AJQ99878 128 aa5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 OSBPL6Q9BZF3 934 aa5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 TMEM260Q9NX78 707 aa5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 MAGEC2Q9UBF1 373 aaPredicted RBP5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 MROH2AA6NES4 1674 aa5.56□□□□□ -1.52
PDLIM5-211ENST00000508531 TMEM94Q12767 1356 aa5.55□□□□□ -1.52
PDLIM5-211ENST00000508531 ELL2O00472 640 aaPredicted RBP5.55□□□□□ -1.52
PDLIM5-211ENST00000508531 KPNA6O60684 536 aa5.55□□□□□ -1.52
PDLIM5-211ENST00000508531 OFD1O75665 1012 aa5.55□□□□□ -1.52
PDLIM5-211ENST00000508531 RFPL3O75679 317 aa5.55□□□□□ -1.52
PDLIM5-211ENST00000508531 GAAP10253 952 aa5.55□□□□□ -1.52
PDLIM5-211ENST00000508531 TGM1P22735 817 aa5.55□□□□□ -1.52
PDLIM5-211ENST00000508531 RRP1P56182 461 aaKnown RBP5.55□□□□□ -1.52
PDLIM5-211ENST00000508531 FAM193AP78312 1265 aa5.55□□□□□ -1.52
PDLIM5-211ENST00000508531 CCDC173Q0VFZ6 552 aa5.55□□□□□ -1.52
PDLIM5-211ENST00000508531 C21orf62-AS1Q17RA5 79 aa5.55□□□□□ -1.52
PDLIM5-211ENST00000508531 ZNF575Q86XF7 245 aa5.55□□□□□ -1.52
PDLIM5-211ENST00000508531 PIK3C3Q8NEB9 887 aa5.55□□□□□ -1.52
PDLIM5-211ENST00000508531 SREK1Q8WXA9 508 aaKnown RBP5.55□□□□□ -1.52
PDLIM5-211ENST00000508531 ZSWIM4Q9H7M6 989 aa5.55□□□□□ -1.52
PDLIM5-211ENST00000508531 IFT57Q9NWB7 429 aa5.55□□□□□ -1.52
PDLIM5-211ENST00000508531 SORCS3Q9UPU3 1222 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms