RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 FAM107BQ9H098 131 aa11.76□□□□□ -0.53
LIN54-207ENST00000508171 RPAP3Q9H6T3 665 aaPredicted RBP11.76□□□□□ -0.53
LIN54-207ENST00000508171 STK32BQ9NY57 414 aa11.76□□□□□ -0.53
LIN54-207ENST00000508171 TCEAL9Q9UHQ7 104 aa11.76□□□□□ -0.53
LIN54-207ENST00000508171 TNS1Q9HBL0 1735 aaKnown RBP11.76□□□□□ -0.53
LIN54-207ENST00000508171 PFASO15067 1338 aa11.76□□□□□ -0.53
LIN54-207ENST00000508171 WDR64B1ANS9 1081 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 KIAA0391O15091 583 aaKnown RBP11.75□□□□□ -0.53
LIN54-207ENST00000508171 MAPK13O15264 365 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 ZNF862O60290 1169 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 SORBS3O60504 671 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 PPFIA2O75334 1257 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 GZMAP12544 262 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 CYP11B1P15538 503 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 PTGIRP43119 386 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 LIG3P49916 1009 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 MTMR3Q13615 1198 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 UBAP2Q5T6F2 1119 aaKnown RBP11.75□□□□□ -0.53
LIN54-207ENST00000508171 KRT39Q6A163 491 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 RUFY4Q6ZNE9 571 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 UBL4BQ8N7F7 174 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 FBXO25Q8TCJ0 367 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 MAGOHBQ96A72 148 aaKnown RBP11.75□□□□□ -0.53
LIN54-207ENST00000508171 PI4K2AQ9BTU6 479 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 NUP85Q9BW27 656 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 EPB41L4BQ9H329 900 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 USP20Q9Y2K6 914 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 MIF4GDA9UHW6 222 aaKnown RBP11.75□□□□□ -0.53
LIN54-207ENST00000508171 E7EVH7 732 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 SHBGP04278 402 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 DLATP10515 647 aaKnown RBP11.75□□□□□ -0.53
LIN54-207ENST00000508171 SMTNP53814 917 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 MFAP3P55082 362 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 MAGOHP61326 146 aaKnown RBP11.75□□□□□ -0.53
LIN54-207ENST00000508171 SP4Q02446 784 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 DMP1Q13316 513 aaPredicted RBP11.75□□□□□ -0.53
LIN54-207ENST00000508171 MKRN4PQ13434 485 aaPredicted RBP11.75□□□□□ -0.53
LIN54-207ENST00000508171 KRT71Q3SY84 523 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 ZNF772Q68DY9 489 aaPredicted RBP11.75□□□□□ -0.53
LIN54-207ENST00000508171 ZDHHC24Q6UX98 284 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 EFCAB13Q8IY85 973 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 MYCBPAPQ8TBZ2 947 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 CD101Q93033 1021 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 KMT5AQ9NQR1 393 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 SLC12A6Q9UHW9 1150 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 CTDP1Q9Y5B0 961 aaPredicted RBP11.75□□□□□ -0.53
LIN54-207ENST00000508171 ADGRA3Q8IWK6 1321 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 SYNGAP1Q96PV0 1343 aa11.75□□□□□ -0.53
LIN54-207ENST00000508171 VWA5AO00534 786 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 RPL21P46778 160 aaKnown RBP11.74□□□□□ -0.53
LIN54-207ENST00000508171 JAK3P52333 1124 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 SLC20A2Q08357 652 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 BIRC3Q13489 604 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 TCEAL1Q15170 157 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 SV2AQ7L0J3 742 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 NLRP14Q86W24 1093 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 MAP4K3Q8IVH8 894 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 ZNF564Q8TBZ8 553 aaPredicted RBP11.74□□□□□ -0.53
LIN54-207ENST00000508171 ZNF473Q8WTR7 871 aaKnown RBP11.74□□□□□ -0.53
LIN54-207ENST00000508171 VTI1AQ96AJ9 217 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 ATG4CQ96DT6 458 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 CEP170P1Q96L14 293 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 CAMKK2Q96RR4 588 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 RPS6KC1Q96S38 1066 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 IWS1Q96ST2 819 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 ANKEF1Q9NU02 776 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 GABBR1Q9UBS5 961 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 FZD1Q9UP38 647 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 A0A087WUV0 522 aaPredicted RBP11.74□□□□□ -0.53
LIN54-207ENST00000508171 PMM2O15305 246 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 GRIN3BO60391 1043 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 PHF2O75151 1096 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 CTNNA2P26232 953 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 KCNJ1P48048 391 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 KRT76Q01546 638 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 DHX34Q14147 1143 aaKnown RBP11.74□□□□□ -0.53
LIN54-207ENST00000508171 PPP2R5EQ16537 467 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 CCDC137Q6PK04 289 aaKnown RBP11.74□□□□□ -0.53
LIN54-207ENST00000508171 TADA2BQ86TJ2 420 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 MICALL1Q8N3F8 863 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 PPM1EQ8WY54 764 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 POMGNT1Q8WZA1 660 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 ZNF653Q96CK0 615 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 MOV10L1Q9BXT6 1211 aaKnown RBP11.74□□□□□ -0.53
LIN54-207ENST00000508171 RAB20Q9NX57 234 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 MAP3K20Q9NYL2 800 aaKnown RBP11.74□□□□□ -0.53
LIN54-207ENST00000508171 GRHL1Q9NZI5 618 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 PTPN22Q9Y2R2 807 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 COQ4Q9Y3A0 265 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 PCDHA10Q9Y5I2 948 aa11.74□□□□□ -0.53
LIN54-207ENST00000508171 COL11A1P12107 1806 aaPredicted RBP11.74□□□□□ -0.53
LIN54-207ENST00000508171 FAM187AA6NFU0 413 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 SPOPO43791 374 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 CAND2O75155 1236 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 NR3C2P08235 984 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 SFNP31947 248 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 GPC3P51654 580 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 SNRPFP62306 86 aaKnown RBP11.73□□□□□ -0.53
LIN54-207ENST00000508171 IFFO1Q0D2I5 559 aa11.73□□□□□ -0.53
LIN54-207ENST00000508171 CHADLQ6NUI6 762 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms