RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 PARVGQ9HBI0 331 aa17.18■□□□□ 0.34
COL1A1-211ENST00000507689 TOPORSQ9NS56 1045 aaPredicted RBP17.18■□□□□ 0.34
COL1A1-211ENST00000507689 ATP6V1DQ9Y5K8 247 aa17.18■□□□□ 0.34
COL1A1-211ENST00000507689 NT5C1B-RDH14C9J2C7 533 aa17.17■□□□□ 0.34
COL1A1-211ENST00000507689 PPP6R2O75170 966 aa17.17■□□□□ 0.34
COL1A1-211ENST00000507689 GALTP07902 379 aa17.17■□□□□ 0.34
COL1A1-211ENST00000507689 DNAJB1P25685 340 aa17.17■□□□□ 0.34
COL1A1-211ENST00000507689 OR1G1P47890 313 aa17.17■□□□□ 0.34
COL1A1-211ENST00000507689 NRIP1P48552 1158 aa17.17■□□□□ 0.34
COL1A1-211ENST00000507689 SCNN1GP51170 649 aa17.17■□□□□ 0.34
COL1A1-211ENST00000507689 GRIK3Q13003 919 aa17.17■□□□□ 0.34
COL1A1-211ENST00000507689 ZNF568Q3ZCX4 644 aa17.17■□□□□ 0.34
COL1A1-211ENST00000507689 DAW1Q8N136 415 aa17.17■□□□□ 0.34
COL1A1-211ENST00000507689 LINC00301Q8NCQ3 95 aa17.17■□□□□ 0.34
COL1A1-211ENST00000507689 IGSF21Q96ID5 467 aa17.17■□□□□ 0.34
COL1A1-211ENST00000507689 REEP2Q9BRK0 252 aa17.17■□□□□ 0.34
COL1A1-211ENST00000507689 NTPCRQ9BSD7 190 aaKnown RBP17.17■□□□□ 0.34
COL1A1-211ENST00000507689 COLEC11Q9BWP8 271 aa17.17■□□□□ 0.34
COL1A1-211ENST00000507689 RNF39Q9H2S5 420 aa17.17■□□□□ 0.34
COL1A1-211ENST00000507689 KLK14Q9P0G3 267 aa17.17■□□□□ 0.34
COL1A1-211ENST00000507689 ARHGAP28Q9P2N2 729 aa17.17■□□□□ 0.34
COL1A1-211ENST00000507689 TNFSF13BQ9Y275 285 aa17.17■□□□□ 0.34
COL1A1-211ENST00000507689 CUTAO60888 179 aa17.16■□□□□ 0.34
COL1A1-211ENST00000507689 ME1P48163 572 aa17.16■□□□□ 0.34
COL1A1-211ENST00000507689 CACNB1Q02641 598 aaPredicted RBP17.16■□□□□ 0.34
COL1A1-211ENST00000507689 HYAL1Q12794 435 aa17.16■□□□□ 0.34
COL1A1-211ENST00000507689 MAPK7Q13164 816 aa17.16■□□□□ 0.34
COL1A1-211ENST00000507689 DDX53Q86TM3 631 aaKnown RBP17.16■□□□□ 0.34
COL1A1-211ENST00000507689 ZNF280BQ86YH2 543 aa17.16■□□□□ 0.34
COL1A1-211ENST00000507689 FAM178BQ8IXR5 827 aa17.16■□□□□ 0.34
COL1A1-211ENST00000507689 VPS52Q8N1B4 723 aa17.16■□□□□ 0.34
COL1A1-211ENST00000507689 ZFP42Q96MM3 310 aa17.16■□□□□ 0.34
COL1A1-211ENST00000507689 SNTG2Q9NY99 539 aa17.16■□□□□ 0.34
COL1A1-211ENST00000507689 SSX2IPQ9Y2D8 614 aa17.16■□□□□ 0.34
COL1A1-211ENST00000507689 GDAQ9Y2T3 454 aa17.16■□□□□ 0.34
COL1A1-211ENST00000507689 KIAA1671Q9BY89 1806 aa17.16■□□□□ 0.34
COL1A1-211ENST00000507689 CHD7Q9P2D1 2997 aa17.15■□□□□ 0.34
COL1A1-211ENST00000507689 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.15■□□□□ 0.34
COL1A1-211ENST00000507689 NPHP3-ACAD11A0A0J9YXS1 232 aa17.15■□□□□ 0.34
COL1A1-211ENST00000507689 K7ENM7 598 aa17.15■□□□□ 0.34
COL1A1-211ENST00000507689 INPPL1O15357 1258 aa17.15■□□□□ 0.34
COL1A1-211ENST00000507689 CXCL14O95715 111 aa17.15■□□□□ 0.34
COL1A1-211ENST00000507689 THP07101 528 aa17.15■□□□□ 0.34
COL1A1-211ENST00000507689 IRS1P35568 1242 aa17.15■□□□□ 0.34
COL1A1-211ENST00000507689 SLC11A1P49279 550 aa17.15■□□□□ 0.34
COL1A1-211ENST00000507689 ERVFC1P60507 584 aa17.15■□□□□ 0.34
COL1A1-211ENST00000507689 CAMK1Q14012 370 aa17.15■□□□□ 0.34
COL1A1-211ENST00000507689 LEXMQ3ZCV2 418 aa17.15■□□□□ 0.34
COL1A1-211ENST00000507689 NT5DC1Q5TFE4 455 aa17.15■□□□□ 0.34
COL1A1-211ENST00000507689 KIAA1841Q6NSI8 718 aa17.15■□□□□ 0.34
COL1A1-211ENST00000507689 EFHBQ8N7U6 833 aa17.15■□□□□ 0.34
COL1A1-211ENST00000507689 ADAMTS19Q8TE59 1207 aa17.15■□□□□ 0.34
COL1A1-211ENST00000507689 ACO2Q99798 780 aaKnown RBP17.15■□□□□ 0.34
COL1A1-211ENST00000507689 TARS2Q9BW92 718 aaKnown RBP17.15■□□□□ 0.34
COL1A1-211ENST00000507689 BLOC1S4Q9NUP1 217 aa17.15■□□□□ 0.34
COL1A1-211ENST00000507689 FAM13BQ9NYF5 915 aa17.15■□□□□ 0.34
COL1A1-211ENST00000507689 ANKFY1Q9P2R3 1169 aa17.15■□□□□ 0.34
COL1A1-211ENST00000507689 DNAJB4Q9UDY4 337 aa17.15■□□□□ 0.34
COL1A1-211ENST00000507689 PRG3Q9Y2Y8 225 aaPredicted RBP17.15■□□□□ 0.34
COL1A1-211ENST00000507689 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.14■□□□□ 0.33
COL1A1-211ENST00000507689 NRP1O14786 923 aa17.14■□□□□ 0.33
COL1A1-211ENST00000507689 TRAK2O60296 914 aa17.14■□□□□ 0.33
COL1A1-211ENST00000507689 TOM1L1O75674 476 aa17.14■□□□□ 0.33
COL1A1-211ENST00000507689 RECQL4O94761 1208 aa17.14■□□□□ 0.33
COL1A1-211ENST00000507689 DDHD2O94830 711 aa17.14■□□□□ 0.33
COL1A1-211ENST00000507689 MCF2P10911 925 aa17.14■□□□□ 0.33
COL1A1-211ENST00000507689 HARSP12081 509 aaKnown RBP17.14■□□□□ 0.33
COL1A1-211ENST00000507689 LIG4P49917 911 aa17.14■□□□□ 0.33
COL1A1-211ENST00000507689 AMPD3Q01432 767 aa17.14■□□□□ 0.33
COL1A1-211ENST00000507689 ARSHQ5FYA8 562 aa17.14■□□□□ 0.33
COL1A1-211ENST00000507689 MPZL3Q6UWV2 235 aa17.14■□□□□ 0.33
COL1A1-211ENST00000507689 ZPBP2Q6X784 338 aa17.14■□□□□ 0.33
COL1A1-211ENST00000507689 HAUS6Q7Z4H7 955 aa17.14■□□□□ 0.33
COL1A1-211ENST00000507689 ZBTB33Q86T24 672 aa17.14■□□□□ 0.33
COL1A1-211ENST00000507689 TMEM161BQ8NDZ6 487 aa17.14■□□□□ 0.33
COL1A1-211ENST00000507689 PYM1Q9BRP8 204 aaKnown RBP17.14■□□□□ 0.33
COL1A1-211ENST00000507689 PANK2Q9BZ23 570 aa17.14■□□□□ 0.33
COL1A1-211ENST00000507689 USP20Q9Y2K6 914 aa17.14■□□□□ 0.33
COL1A1-211ENST00000507689 COL6A3P12111 3177 aa17.13■□□□□ 0.33
COL1A1-211ENST00000507689 SPDYE4A6NLX3 237 aa17.13■□□□□ 0.33
COL1A1-211ENST00000507689 H3BQ06 376 aaPredicted RBP17.13■□□□□ 0.33
COL1A1-211ENST00000507689 FSCN2O14926 492 aa17.13■□□□□ 0.33
COL1A1-211ENST00000507689 CLDN3O15551 220 aa17.13■□□□□ 0.33
COL1A1-211ENST00000507689 TADA2AO75478 443 aa17.13■□□□□ 0.33
COL1A1-211ENST00000507689 URODP06132 367 aa17.13■□□□□ 0.33
COL1A1-211ENST00000507689 MAPTP10636 758 aaKnown RBP17.13■□□□□ 0.33
COL1A1-211ENST00000507689 GAP43P17677 238 aa17.13■□□□□ 0.33
COL1A1-211ENST00000507689 KCNQ1P51787 676 aa17.13■□□□□ 0.33
COL1A1-211ENST00000507689 KYAT1Q16773 422 aa17.13■□□□□ 0.33
COL1A1-211ENST00000507689 EEF1DP3Q658K8 133 aa17.13■□□□□ 0.33
COL1A1-211ENST00000507689 PTCRAQ6ISU1 281 aaPredicted RBP17.13■□□□□ 0.33
COL1A1-211ENST00000507689 USP49Q70CQ1 688 aa17.13■□□□□ 0.33
COL1A1-211ENST00000507689 DYMQ7RTS9 669 aa17.13■□□□□ 0.33
COL1A1-211ENST00000507689 ADGRD2Q7Z7M1 963 aa17.13■□□□□ 0.33
COL1A1-211ENST00000507689 COLGALT2Q8IYK4 626 aa17.13■□□□□ 0.33
COL1A1-211ENST00000507689 PDILTQ8N807 584 aa17.13■□□□□ 0.33
COL1A1-211ENST00000507689 MRPL43Q8N983 215 aaKnown RBP17.13■□□□□ 0.33
COL1A1-211ENST00000507689 IQUBQ8NA54 791 aa17.13■□□□□ 0.33
COL1A1-211ENST00000507689 ACAP3Q96P50 834 aa17.13■□□□□ 0.33
COL1A1-211ENST00000507689 UHRF1Q96T88 793 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms