RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 LTBP2Q14767 1821 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 A0A1B0GUA9 196 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 TRIM49BA6NDI0 452 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 PPP1R3GB7ZBB8 358 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 ABLIM1O14639 778 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 HNRNPDLO14979 420 aaKnown RBP9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 ZSCAN20P17040 1043 aaPredicted RBP9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 ATF7P17544 494 aaPredicted RBP9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 AKAP5P24588 427 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 RFC2P35250 354 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 LIG4P49917 911 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 WDR5P61964 334 aaKnown RBP9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 IKBKEQ14164 716 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 FAM187BQ17R55 369 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 DPCR1Q3MIW9 517 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 ZNF658Q5TYW1 1059 aaPredicted RBP9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 MAP4K3Q8IVH8 894 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 THNSL1Q8IYQ7 743 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 USP38Q8NB14 1042 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 SMG8Q8ND04 991 aaKnown RBP9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 SAAL1Q96ER3 474 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 CDT1Q9H211 546 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 NXF3Q9H4D5 531 aaKnown RBP9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 ST6GALNAC4Q9H4F1 302 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 PTPRHQ9HD43 1115 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 SNTG2Q9NY99 539 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 PCDHB2Q9Y5E7 798 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 SQORQ9Y6N5 450 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 TANC1Q9C0D5 1861 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 CNTNAP2Q9UHC6 1331 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 SYCE3A1L190 88 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 C9IYK1 514 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 MEFVO15553 781 aaPredicted RBP9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 FGFR1P11362 822 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 TNFSF9P41273 254 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 ACOT2P49753 483 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 CYP2J2P51589 502 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 RABGGTBP53611 331 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 SPAG1Q07617 926 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 PSMD2Q13200 908 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 ZNF568Q3ZCX4 644 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 NOTUMQ6P988 496 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 RBM43Q6ZSC3 357 aaKnown RBP9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 ECHDC2Q86YB7 292 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 ADSSL1Q8N142 457 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 RDH13Q8NBN7 331 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 HS3ST6Q96QI5 342 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 MED15Q96RN5 788 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 KCTD10Q9H3F6 313 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 RGS18Q9NS28 235 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 FAM105AQ9NUU6 356 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 RMND1Q9NWS8 449 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 HCSTQ9UBK5 93 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 CTNND2Q9UQB3 1225 aa9.67□□□□□ -0.86
SCAMP1-202ENST00000506858 CHD9Q3L8U1 2897 aa9.66□□□□□ -0.86
SCAMP1-202ENST00000506858 CLDN3O15551 220 aa9.66□□□□□ -0.86
SCAMP1-202ENST00000506858 SLC34A2O95436 690 aa9.66□□□□□ -0.86
SCAMP1-202ENST00000506858 PARNO95453 639 aaKnown RBP9.66□□□□□ -0.86
SCAMP1-202ENST00000506858 MYOGP15173 224 aa9.66□□□□□ -0.86
SCAMP1-202ENST00000506858 PROZP22891 400 aa9.66□□□□□ -0.86
SCAMP1-202ENST00000506858 WNT7BP56706 349 aa9.66□□□□□ -0.86
SCAMP1-202ENST00000506858 NLRP12P59046 1061 aa9.66□□□□□ -0.86
SCAMP1-202ENST00000506858 NCBP1Q09161 790 aaKnown RBP9.66□□□□□ -0.86
SCAMP1-202ENST00000506858 KNOP1Q1ED39 458 aaKnown RBP9.66□□□□□ -0.86
SCAMP1-202ENST00000506858 PAN2Q504Q3 1202 aaKnown RBP9.66□□□□□ -0.86
SCAMP1-202ENST00000506858 ANKRD40Q6AI12 368 aa9.66□□□□□ -0.86
SCAMP1-202ENST00000506858 MPZL3Q6UWV2 235 aa9.66□□□□□ -0.86
SCAMP1-202ENST00000506858 AGMOQ6ZNB7 445 aa9.66□□□□□ -0.86
SCAMP1-202ENST00000506858 POMGNT1Q8WZA1 660 aa9.66□□□□□ -0.86
SCAMP1-202ENST00000506858 HERVK_113Q902F9 699 aa9.66□□□□□ -0.86
SCAMP1-202ENST00000506858 PRIMPOLQ96LW4 560 aa9.66□□□□□ -0.86
SCAMP1-202ENST00000506858 MSTO1Q9BUK6 570 aa9.66□□□□□ -0.86
SCAMP1-202ENST00000506858 TNFSF13BQ9Y275 285 aa9.66□□□□□ -0.86
SCAMP1-202ENST00000506858 IPPQ9Y573 584 aa9.66□□□□□ -0.86
SCAMP1-202ENST00000506858 A0A0B4J269 797 aa9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 A0A0U1RQF3 1178 aa9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 ABHD14A-ACY1A0A1B0GW23 586 aa9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 H0YCG3 227 aa9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 N4BP3O15049 544 aa9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 EIF3DO15371 548 aaKnown RBP eCLIP9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 TOM1L1O75674 476 aa9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 PIGRP01833 764 aa9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 CASP4P49662 377 aa9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 FAM189BP81408 668 aa9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 BMT2Q1RMZ1 405 aa9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 ZSCAN23Q3MJ62 389 aa9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 SLC27A1Q6PCB7 646 aa9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 PSRC1Q6PGN9 363 aaPredicted RBP9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 ZPBP2Q6X784 338 aa9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 C11orf57Q6ZUT1 292 aaPredicted RBP9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 SLC24A5Q71RS6 500 aa9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 SPRED2Q7Z698 418 aa9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 GUF1Q8N442 669 aaKnown RBP9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 NELFBQ8WX92 580 aa9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 RNPC3Q96LT9 517 aaKnown RBP9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 ZFP42Q96MM3 310 aa9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 FAM213AQ9BRX8 229 aa9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 TRIM6Q9C030 488 aaPredicted RBP9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 GBP3Q9H0R5 595 aa9.65□□□□□ -0.86
SCAMP1-202ENST00000506858 CHST12Q9NRB3 414 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms