RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 BMS1Q14692 1282 aaKnown RBP17.1■□□□□ 0.33
MED28-204ENST00000506409 SLC39A14Q15043 492 aa17.1■□□□□ 0.33
MED28-204ENST00000506409 DCAF4L1Q3SXM0 396 aa17.1■□□□□ 0.33
MED28-204ENST00000506409 ARSHQ5FYA8 562 aa17.1■□□□□ 0.33
MED28-204ENST00000506409 NT5DC1Q5TFE4 455 aa17.1■□□□□ 0.33
MED28-204ENST00000506409 FOXD4L5Q5VV16 416 aaPredicted RBP17.1■□□□□ 0.33
MED28-204ENST00000506409 EEF1DP3Q658K8 133 aa17.1■□□□□ 0.33
MED28-204ENST00000506409 PTCRAQ6ISU1 281 aaPredicted RBP17.1■□□□□ 0.33
MED28-204ENST00000506409 USP49Q70CQ1 688 aa17.1■□□□□ 0.33
MED28-204ENST00000506409 GPBP1Q86WP2 473 aa17.1■□□□□ 0.33
MED28-204ENST00000506409 VPS52Q8N1B4 723 aa17.1■□□□□ 0.33
MED28-204ENST00000506409 EFHBQ8N7U6 833 aa17.1■□□□□ 0.33
MED28-204ENST00000506409 SPRYD3Q8NCJ5 442 aa17.1■□□□□ 0.33
MED28-204ENST00000506409 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.1■□□□□ 0.33
MED28-204ENST00000506409 BCL7CQ8WUZ0 217 aaPredicted RBP17.1■□□□□ 0.33
MED28-204ENST00000506409 SPIRE2Q8WWL2 714 aa17.1■□□□□ 0.33
MED28-204ENST00000506409 FOXD4L4Q8WXT5 416 aaPredicted RBP17.1■□□□□ 0.33
MED28-204ENST00000506409 RAD54LQ92698 747 aa17.1■□□□□ 0.33
MED28-204ENST00000506409 CLIC6Q96NY7 704 aa17.1■□□□□ 0.33
MED28-204ENST00000506409 CDCA3Q99618 268 aaPredicted RBP17.1■□□□□ 0.33
MED28-204ENST00000506409 MRPL4Q9BYD3 311 aaKnown RBP17.1■□□□□ 0.33
MED28-204ENST00000506409 TMEM134Q9H6X4 195 aa17.1■□□□□ 0.33
MED28-204ENST00000506409 MIOSQ9NXC5 875 aa17.1■□□□□ 0.33
MED28-204ENST00000506409 KLK14Q9P0G3 267 aa17.1■□□□□ 0.33
MED28-204ENST00000506409 CCDC39Q9UFE4 941 aa17.1■□□□□ 0.33
MED28-204ENST00000506409 FAN1Q9Y2M0 1017 aa17.1■□□□□ 0.33
MED28-204ENST00000506409 MORC2Q9Y6X9 1032 aaPredicted RBP17.1■□□□□ 0.33
MED28-204ENST00000506409 ZMYM2Q9UBW7 1377 aa17.1■□□□□ 0.33
MED28-204ENST00000506409 FSD2A1L4K1 749 aa17.09■□□□□ 0.33
MED28-204ENST00000506409 HIDE1A8MVS5 230 aa17.09■□□□□ 0.33
MED28-204ENST00000506409 TBX10O75333 385 aa17.09■□□□□ 0.33
MED28-204ENST00000506409 NASPP49321 788 aaPredicted RBP17.09■□□□□ 0.33
MED28-204ENST00000506409 DSC1Q08554 894 aa17.09■□□□□ 0.33
MED28-204ENST00000506409 MCM6Q14566 821 aa17.09■□□□□ 0.33
MED28-204ENST00000506409 DUSP6Q16828 381 aa17.09■□□□□ 0.33
MED28-204ENST00000506409 PUS10Q3MIT2 529 aaKnown RBP17.09■□□□□ 0.33
MED28-204ENST00000506409 TAS1R3Q7RTX0 852 aa17.09■□□□□ 0.33
MED28-204ENST00000506409 APBB1IPQ7Z5R6 666 aaPredicted RBP17.09■□□□□ 0.33
MED28-204ENST00000506409 DDX53Q86TM3 631 aaKnown RBP17.09■□□□□ 0.33
MED28-204ENST00000506409 COLGALT2Q8IYK4 626 aa17.09■□□□□ 0.33
MED28-204ENST00000506409 KRI1Q8N9T8 703 aaKnown RBP17.09■□□□□ 0.33
MED28-204ENST00000506409 GSTCDQ8NEC7 633 aa17.09■□□□□ 0.33
MED28-204ENST00000506409 LARP4BQ92615 738 aaKnown RBP17.09■□□□□ 0.33
MED28-204ENST00000506409 ZNF396Q96N95 335 aaPredicted RBP17.09■□□□□ 0.33
MED28-204ENST00000506409 NECAB3Q96P71 396 aaPredicted RBP17.09■□□□□ 0.33
MED28-204ENST00000506409 RPS6KC1Q96S38 1066 aa17.09■□□□□ 0.33
MED28-204ENST00000506409 REEP2Q9BRK0 252 aa17.09■□□□□ 0.33
MED28-204ENST00000506409 NTPCRQ9BSD7 190 aaKnown RBP17.09■□□□□ 0.33
MED28-204ENST00000506409 SNTG2Q9NY99 539 aa17.09■□□□□ 0.33
MED28-204ENST00000506409 LARSQ9P2J5 1176 aaKnown RBP17.09■□□□□ 0.33
MED28-204ENST00000506409 DAXXQ9UER7 740 aaPredicted RBP17.09■□□□□ 0.33
MED28-204ENST00000506409 ODF2LQ9ULJ1 636 aa17.09■□□□□ 0.33
MED28-204ENST00000506409 TNFSF13BQ9Y275 285 aa17.09■□□□□ 0.33
MED28-204ENST00000506409 PRG3Q9Y2Y8 225 aaPredicted RBP17.09■□□□□ 0.33
MED28-204ENST00000506409 NRP1O14786 923 aa17.08■□□□□ 0.32
MED28-204ENST00000506409 NR1I2O75469 434 aa17.08■□□□□ 0.32
MED28-204ENST00000506409 RECQL4O94761 1208 aa17.08■□□□□ 0.32
MED28-204ENST00000506409 KRT18P05783 430 aaKnown RBP17.08■□□□□ 0.32
MED28-204ENST00000506409 ZSCAN22P10073 491 aaPredicted RBP17.08■□□□□ 0.32
MED28-204ENST00000506409 CA8P35219 290 aa17.08■□□□□ 0.32
MED28-204ENST00000506409 OR1G1P47890 313 aa17.08■□□□□ 0.32
MED28-204ENST00000506409 GRIK3Q13003 919 aa17.08■□□□□ 0.32
MED28-204ENST00000506409 STK38Q15208 465 aa17.08■□□□□ 0.32
MED28-204ENST00000506409 CLUL1Q15846 466 aa17.08■□□□□ 0.32
MED28-204ENST00000506409 MRPL43Q8N983 215 aaKnown RBP17.08■□□□□ 0.32
MED28-204ENST00000506409 ACO2Q99798 780 aaKnown RBP17.08■□□□□ 0.32
MED28-204ENST00000506409 MYH11P35749 1972 aa17.08■□□□□ 0.32
MED28-204ENST00000506409 GRXCR2A6NFK2 248 aa17.07■□□□□ 0.32
MED28-204ENST00000506409 C2orf71A6NGG8 1288 aa17.07■□□□□ 0.32
MED28-204ENST00000506409 FAM13AO94988 1023 aa17.07■□□□□ 0.32
MED28-204ENST00000506409 GLP2RO95838 553 aa17.07■□□□□ 0.32
MED28-204ENST00000506409 IL9P15248 144 aa17.07■□□□□ 0.32
MED28-204ENST00000506409 DDIT3P35638 169 aa17.07■□□□□ 0.32
MED28-204ENST00000506409 STRN3Q13033 797 aa17.07■□□□□ 0.32
MED28-204ENST00000506409 ZNF568Q3ZCX4 644 aa17.07■□□□□ 0.32
MED28-204ENST00000506409 LINC00301Q8NCQ3 95 aa17.07■□□□□ 0.32
MED28-204ENST00000506409 TMEM161BQ8NDZ6 487 aa17.07■□□□□ 0.32
MED28-204ENST00000506409 TARS2Q9BW92 718 aaKnown RBP17.07■□□□□ 0.32
MED28-204ENST00000506409 VN1R3Q9BXE9 311 aa17.07■□□□□ 0.32
MED28-204ENST00000506409 ZBP1Q9H171 429 aa17.07■□□□□ 0.32
MED28-204ENST00000506409 TFIP11Q9UBB9 837 aaKnown RBP17.07■□□□□ 0.32
MED28-204ENST00000506409 STK17AQ9UEE5 414 aa17.07■□□□□ 0.32
MED28-204ENST00000506409 STK39Q9UEW8 545 aa17.07■□□□□ 0.32
MED28-204ENST00000506409 FAM50BQ9Y247 325 aa17.07■□□□□ 0.32
MED28-204ENST00000506409 GDAQ9Y2T3 454 aa17.07■□□□□ 0.32
MED28-204ENST00000506409 TDRD15B5MCY1 1934 aaKnown RBP17.07■□□□□ 0.32
MED28-204ENST00000506409 NCOR1O75376 2440 aa17.06■□□□□ 0.32
MED28-204ENST00000506409 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.06■□□□□ 0.32
MED28-204ENST00000506409 H0YCG3 227 aa17.06■□□□□ 0.32
MED28-204ENST00000506409 TNFRSF10AO00220 468 aa17.06■□□□□ 0.32
MED28-204ENST00000506409 SPTLC2O15270 562 aa17.06■□□□□ 0.32
MED28-204ENST00000506409 TBCAO75347 108 aaKnown RBP17.06■□□□□ 0.32
MED28-204ENST00000506409 CXCL14O95715 111 aa17.06■□□□□ 0.32
MED28-204ENST00000506409 F13A1P00488 732 aa17.06■□□□□ 0.32
MED28-204ENST00000506409 CTSAP10619 480 aa17.06■□□□□ 0.32
MED28-204ENST00000506409 MAPTP10636 758 aaKnown RBP17.06■□□□□ 0.32
MED28-204ENST00000506409 RBM10P98175 930 aaKnown RBP17.06■□□□□ 0.32
MED28-204ENST00000506409 RRAGBQ5VZM2 374 aa17.06■□□□□ 0.32
MED28-204ENST00000506409 TCHPQ9BT92 498 aa17.06■□□□□ 0.32
MED28-204ENST00000506409 CDT1Q9H211 546 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms