RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 ABCB11O95342 1321 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 HIVEP3Q5T1R4 2406 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 AKAP9Q99996 3911 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 DENND4CQ5VZ89 1909 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 MYBPHLA2RUH7 354 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 FAM149AA5PLN7 773 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 RRN3P2A6NIE6 340 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 ZBTB42B2RXF5 422 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 F8W810 466 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 M0QZ92 97 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 GPR182O15218 404 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 GAS2O43903 313 aaKnown RBP3.88□□□□□ -1.79
TCOF1-208ENST00000506063 ATP9AO75110 1047 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 RHOBTB1O94844 696 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 ITGB2P05107 769 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 POU2F2P09086 479 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 CEBPBP17676 345 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 RPL17P18621 184 aaKnown RBP3.88□□□□□ -1.79
TCOF1-208ENST00000506063 HOXA9P31269 272 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 CTHP32929 405 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 SP4Q02446 784 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 LMAN2Q12907 356 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 HNRNPDQ14103 355 aaKnown RBP3.88□□□□□ -1.79
TCOF1-208ENST00000506063 LRRC32Q14392 662 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 NEDD9Q14511 834 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 UBE3CQ15386 1083 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 CCDC184Q52MB2 194 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 TAF1BQ53T94 588 aaPredicted RBP3.88□□□□□ -1.79
TCOF1-208ENST00000506063 FAM78AQ5JUQ0 283 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 DGKKQ5KSL6 1271 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 ZNF746Q6NUN9 644 aaPredicted RBP3.88□□□□□ -1.79
TCOF1-208ENST00000506063 SLC23A3Q6PIS1 610 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 MTHFD1LQ6UB35 978 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 AGMOQ6ZNB7 445 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 PRICKLE2Q7Z3G6 844 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 CYP2U1Q7Z449 544 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 PALB2Q86YC2 1186 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 NME8Q8N427 588 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 SNIP1Q8TAD8 396 aaKnown RBP3.88□□□□□ -1.79
TCOF1-208ENST00000506063 BAHD1Q8TBE0 780 aaPredicted RBP3.88□□□□□ -1.79
TCOF1-208ENST00000506063 IRF7Q92985 503 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 LPPQ93052 612 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 CLUAP1Q96AJ1 413 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 RSPRY1Q96DX4 576 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 MCRS1Q96EZ8 462 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 MED8Q96G25 268 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 POM121Q96HA1 1249 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 B3GALT6Q96L58 329 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 ASB16Q96NS5 453 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 HHIPQ96QV1 700 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 OSMRQ99650 979 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 SENP7Q9BQF6 1050 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 TRMT61BQ9BVS5 477 aaKnown RBP3.88□□□□□ -1.79
TCOF1-208ENST00000506063 CAPN10Q9HC96 672 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 DNAAF2Q9NVR5 837 aaKnown RBP3.88□□□□□ -1.79
TCOF1-208ENST00000506063 ERAP1Q9NZ08 941 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 GDE1Q9NZC3 331 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 EBF1Q9UH73 591 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 DPP7Q9UHL4 492 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 STX8Q9UNK0 236 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 HDAC5Q9UQL6 1122 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 GINS2Q9Y248 185 aa3.88□□□□□ -1.79
TCOF1-208ENST00000506063 ARID1BQ8NFD5 2236 aaPredicted RBP3.87□□□□□ -1.79
TCOF1-208ENST00000506063 TP53BP1Q12888 1972 aaPredicted RBP3.87□□□□□ -1.79
TCOF1-208ENST00000506063 SLC38A8A6NNN8 435 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 SPECC1L-ADORA2AF8WAN1 911 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 NRP1O14786 923 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 FOXP2O15409 715 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 CCL16O15467 120 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 PPP1R11O60927 126 aaPredicted RBP3.87□□□□□ -1.79
TCOF1-208ENST00000506063 MOSPD3O75425 235 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 OFD1O75665 1012 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 AFPP02771 609 aaKnown RBP3.87□□□□□ -1.79
TCOF1-208ENST00000506063 URODP06132 367 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 C8AP07357 584 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 HNRNPA1P09651 372 aaKnown RBP eCLIP3.87□□□□□ -1.79
TCOF1-208ENST00000506063 MYF5P13349 255 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 KCNA2P16389 499 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 PSMC3P17980 439 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 GDI1P31150 447 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 HOXA13P31271 388 aaPredicted RBP3.87□□□□□ -1.79
TCOF1-208ENST00000506063 GLUD2P49448 558 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 CRYBB1P53674 252 aaPredicted RBP3.87□□□□□ -1.79
TCOF1-208ENST00000506063 CXADRP78310 365 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 RHDQ02161 417 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 MAPK8IP2Q13387 824 aaPredicted RBP3.87□□□□□ -1.79
TCOF1-208ENST00000506063 KARSQ15046 597 aaKnown RBP3.87□□□□□ -1.79
TCOF1-208ENST00000506063 PON2Q15165 354 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 SMAD1Q15797 465 aaKnown RBP3.87□□□□□ -1.79
TCOF1-208ENST00000506063 CDC37Q16543 378 aaPredicted RBP3.87□□□□□ -1.79
TCOF1-208ENST00000506063 KIZQ2M2Z5 673 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 QRICH1Q2TAL8 776 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 NOMO2Q5JPE7 1267 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 PRSS36Q5K4E3 855 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 NFXL1Q6ZNB6 911 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 MCF2L2Q86YR7 1114 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 SPACA3Q8IXA5 215 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 SYNPOQ8N3V7 929 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 MINDY1Q8N5J2 469 aa3.87□□□□□ -1.79
TCOF1-208ENST00000506063 CAMKK1Q8N5S9 505 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms