RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 POMCP01189 267 aa12.55□□□□□ -0.4
KDM3B-203ENST00000505756 EDN1P05305 212 aa12.55□□□□□ -0.4
KDM3B-203ENST00000505756 TFF2Q03403 129 aa12.55□□□□□ -0.4
KDM3B-203ENST00000505756 HYAL1Q12794 435 aa12.55□□□□□ -0.4
KDM3B-203ENST00000505756 MCM6Q14566 821 aa12.55□□□□□ -0.4
KDM3B-203ENST00000505756 DCAF4L1Q3SXM0 396 aa12.55□□□□□ -0.4
KDM3B-203ENST00000505756 FOXD4L6Q3SYB3 417 aaPredicted RBP12.55□□□□□ -0.4
KDM3B-203ENST00000505756 NT5DC1Q5TFE4 455 aa12.55□□□□□ -0.4
KDM3B-203ENST00000505756 ATF7IP2Q5U623 682 aa12.55□□□□□ -0.4
KDM3B-203ENST00000505756 ADALQ6DHV7 355 aa12.55□□□□□ -0.4
KDM3B-203ENST00000505756 FOXD4L3Q6VB84 417 aaPredicted RBP12.55□□□□□ -0.4
KDM3B-203ENST00000505756 APBB1IPQ7Z5R6 666 aaPredicted RBP12.55□□□□□ -0.4
KDM3B-203ENST00000505756 ZNF280BQ86YH2 543 aa12.55□□□□□ -0.4
KDM3B-203ENST00000505756 MICAL1Q8TDZ2 1067 aa12.55□□□□□ -0.4
KDM3B-203ENST00000505756 PABPC5Q96DU9 382 aaKnown RBP12.55□□□□□ -0.4
KDM3B-203ENST00000505756 TMEM169Q96HH4 297 aa12.55□□□□□ -0.4
KDM3B-203ENST00000505756 FAM193BQ96PV7 902 aaPredicted RBP12.55□□□□□ -0.4
KDM3B-203ENST00000505756 GAD1Q99259 594 aa12.55□□□□□ -0.4
KDM3B-203ENST00000505756 TMEM175Q9BSA9 504 aa12.55□□□□□ -0.4
KDM3B-203ENST00000505756 APOL6Q9BWW8 343 aa12.55□□□□□ -0.4
KDM3B-203ENST00000505756 GBP3Q9H0R5 595 aa12.55□□□□□ -0.4
KDM3B-203ENST00000505756 GDPD2Q9HCC8 539 aa12.55□□□□□ -0.4
KDM3B-203ENST00000505756 TFIP11Q9UBB9 837 aaKnown RBP12.55□□□□□ -0.4
KDM3B-203ENST00000505756 STK17AQ9UEE5 414 aa12.55□□□□□ -0.4
KDM3B-203ENST00000505756 TNFSF13BQ9Y275 285 aa12.55□□□□□ -0.4
KDM3B-203ENST00000505756 ATG2AQ2TAZ0 1938 aa12.54□□□□□ -0.4
KDM3B-203ENST00000505756 NPHP3-ACAD11A0A0J9YXS1 232 aa12.54□□□□□ -0.4
KDM3B-203ENST00000505756 NT5C1B-RDH14C9J2C7 533 aa12.54□□□□□ -0.4
KDM3B-203ENST00000505756 H0YCG3 227 aa12.54□□□□□ -0.4
KDM3B-203ENST00000505756 FSCN2O14926 492 aa12.54□□□□□ -0.4
KDM3B-203ENST00000505756 SLC16A4O15374 487 aa12.54□□□□□ -0.4
KDM3B-203ENST00000505756 PRPF40AO75400 957 aaKnown RBP12.54□□□□□ -0.4
KDM3B-203ENST00000505756 DDHD2O94830 711 aa12.54□□□□□ -0.4
KDM3B-203ENST00000505756 KRT18P05783 430 aaKnown RBP12.54□□□□□ -0.4
KDM3B-203ENST00000505756 GALTP07902 379 aa12.54□□□□□ -0.4
KDM3B-203ENST00000505756 AKAP5P24588 427 aa12.54□□□□□ -0.4
KDM3B-203ENST00000505756 SLC11A1P49279 550 aa12.54□□□□□ -0.4
KDM3B-203ENST00000505756 ERVFC1P60507 584 aa12.54□□□□□ -0.4
KDM3B-203ENST00000505756 CACNB1Q02641 598 aaPredicted RBP12.54□□□□□ -0.4
KDM3B-203ENST00000505756 STRN3Q13033 797 aa12.54□□□□□ -0.4
KDM3B-203ENST00000505756 DHX8Q14562 1220 aaKnown RBP12.54□□□□□ -0.4
KDM3B-203ENST00000505756 RRAGBQ5VZM2 374 aa12.54□□□□□ -0.4
KDM3B-203ENST00000505756 EEF1DP3Q658K8 133 aa12.54□□□□□ -0.4
KDM3B-203ENST00000505756 CCDC73Q6ZRK6 1079 aa12.54□□□□□ -0.4
KDM3B-203ENST00000505756 TMEM161BQ8NDZ6 487 aa12.54□□□□□ -0.4
KDM3B-203ENST00000505756 IGSF21Q96ID5 467 aa12.54□□□□□ -0.4
KDM3B-203ENST00000505756 ZFP42Q96MM3 310 aa12.54□□□□□ -0.4
KDM3B-203ENST00000505756 TCF25Q9BQ70 676 aa12.54□□□□□ -0.4
KDM3B-203ENST00000505756 REEP2Q9BRK0 252 aa12.54□□□□□ -0.4
KDM3B-203ENST00000505756 MRPL4Q9BYD3 311 aaKnown RBP12.54□□□□□ -0.4
KDM3B-203ENST00000505756 NGRNQ9NPE2 291 aaKnown RBP12.54□□□□□ -0.4
KDM3B-203ENST00000505756 DNAJB4Q9UDY4 337 aa12.54□□□□□ -0.4
KDM3B-203ENST00000505756 STK39Q9UEW8 545 aa12.54□□□□□ -0.4
KDM3B-203ENST00000505756 PARP2Q9UGN5 583 aa12.54□□□□□ -0.4
KDM3B-203ENST00000505756 PCDHA7Q9UN72 937 aa12.54□□□□□ -0.4
KDM3B-203ENST00000505756 USP20Q9Y2K6 914 aa12.54□□□□□ -0.4
KDM3B-203ENST00000505756 FSD2A1L4K1 749 aa12.53□□□□□ -0.4
KDM3B-203ENST00000505756 B4GALT3O60512 393 aa12.53□□□□□ -0.4
KDM3B-203ENST00000505756 CUTAO60888 179 aa12.53□□□□□ -0.4
KDM3B-203ENST00000505756 FAM13AO94988 1023 aa12.53□□□□□ -0.4
KDM3B-203ENST00000505756 ALDH2P05091 517 aa12.53□□□□□ -0.4
KDM3B-203ENST00000505756 MAPTP10636 758 aaKnown RBP12.53□□□□□ -0.4
KDM3B-203ENST00000505756 SCP2P22307 547 aa12.53□□□□□ -0.4
KDM3B-203ENST00000505756 KCNA5P22460 613 aa12.53□□□□□ -0.4
KDM3B-203ENST00000505756 SCNN1GP51170 649 aa12.53□□□□□ -0.4
KDM3B-203ENST00000505756 ZNF131P52739 623 aa12.53□□□□□ -0.4
KDM3B-203ENST00000505756 NCKAP1LP55160 1127 aa12.53□□□□□ -0.4
KDM3B-203ENST00000505756 DSC1Q08554 894 aa12.53□□□□□ -0.4
KDM3B-203ENST00000505756 GIT2Q14161 759 aa12.53□□□□□ -0.4
KDM3B-203ENST00000505756 CTC1Q2NKJ3 1217 aa12.53□□□□□ -0.4
KDM3B-203ENST00000505756 LEXMQ3ZCV2 418 aa12.53□□□□□ -0.4
KDM3B-203ENST00000505756 TAS1R3Q7RTX0 852 aa12.53□□□□□ -0.4
KDM3B-203ENST00000505756 TMC7Q7Z402 723 aa12.53□□□□□ -0.4
KDM3B-203ENST00000505756 ADGRD2Q7Z7M1 963 aa12.53□□□□□ -0.4
KDM3B-203ENST00000505756 DDX53Q86TM3 631 aaKnown RBP12.53□□□□□ -0.4
KDM3B-203ENST00000505756 TMEM173Q86WV6 379 aaPredicted RBP12.53□□□□□ -0.4
KDM3B-203ENST00000505756 COLGALT2Q8IYK4 626 aa12.53□□□□□ -0.4
KDM3B-203ENST00000505756 GSTCDQ8NEC7 633 aa12.53□□□□□ -0.4
KDM3B-203ENST00000505756 KCNN1Q92952 543 aa12.53□□□□□ -0.4
KDM3B-203ENST00000505756 RPS6KC1Q96S38 1066 aa12.53□□□□□ -0.4
KDM3B-203ENST00000505756 CDCA3Q99618 268 aaPredicted RBP12.53□□□□□ -0.4
KDM3B-203ENST00000505756 ACO2Q99798 780 aaKnown RBP12.53□□□□□ -0.4
KDM3B-203ENST00000505756 PARVGQ9HBI0 331 aa12.53□□□□□ -0.4
KDM3B-203ENST00000505756 ENTPD7Q9NQZ7 604 aa12.53□□□□□ -0.4
KDM3B-203ENST00000505756 CLDND1Q9NY35 253 aa12.53□□□□□ -0.4
KDM3B-203ENST00000505756 SNTG2Q9NY99 539 aa12.53□□□□□ -0.4
KDM3B-203ENST00000505756 PCDHGC5Q9Y5F6 944 aa12.53□□□□□ -0.4
KDM3B-203ENST00000505756 DLL1O00548 723 aa12.52□□□□□ -0.41
KDM3B-203ENST00000505756 NRP1O14786 923 aa12.52□□□□□ -0.41
KDM3B-203ENST00000505756 GADD45BO75293 160 aaPredicted RBP12.52□□□□□ -0.41
KDM3B-203ENST00000505756 TBCAO75347 108 aaKnown RBP12.52□□□□□ -0.41
KDM3B-203ENST00000505756 NR1I2O75469 434 aa12.52□□□□□ -0.41
KDM3B-203ENST00000505756 RECQL4O94761 1208 aa12.52□□□□□ -0.41
KDM3B-203ENST00000505756 BMP1P13497 986 aa12.52□□□□□ -0.41
KDM3B-203ENST00000505756 CMA1P23946 247 aa12.52□□□□□ -0.41
KDM3B-203ENST00000505756 GTF2F1P35269 517 aaKnown RBP eCLIP12.52□□□□□ -0.41
KDM3B-203ENST00000505756 STAT6P42226 847 aa12.52□□□□□ -0.41
KDM3B-203ENST00000505756 NRIP1P48552 1158 aa12.52□□□□□ -0.41
KDM3B-203ENST00000505756 KCNQ1P51787 676 aa12.52□□□□□ -0.41
KDM3B-203ENST00000505756 GRIK3Q13003 919 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms