RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 VSNL1P62760 191 aa18.66■□□□□ 0.58
TRAPPC11-204ENST00000505676 ERVK-9P63128 1117 aa18.66■□□□□ 0.58
TRAPPC11-204ENST00000505676 GABPB1Q06547 395 aaPredicted RBP18.66■□□□□ 0.58
TRAPPC11-204ENST00000505676 ARHGEF19Q8IW93 802 aa18.66■□□□□ 0.58
TRAPPC11-204ENST00000505676 ABRAQ8N0Z2 381 aa18.66■□□□□ 0.58
TRAPPC11-204ENST00000505676 ATP8B4Q8TF62 1192 aa18.66■□□□□ 0.58
TRAPPC11-204ENST00000505676 SLC10A4Q96EP9 437 aa18.66■□□□□ 0.58
TRAPPC11-204ENST00000505676 FNBP1Q96RU3 617 aa18.66■□□□□ 0.58
TRAPPC11-204ENST00000505676 FUT8Q9BYC5 575 aa18.66■□□□□ 0.58
TRAPPC11-204ENST00000505676 DOCK5Q9H7D0 1870 aa18.66■□□□□ 0.58
TRAPPC11-204ENST00000505676 ADCY3O60266 1144 aa18.65■□□□□ 0.58
TRAPPC11-204ENST00000505676 TFRCP02786 760 aaKnown RBP18.65■□□□□ 0.58
TRAPPC11-204ENST00000505676 TNFRSF8P28908 595 aa18.65■□□□□ 0.58
TRAPPC11-204ENST00000505676 FSTL1Q12841 308 aa18.65■□□□□ 0.58
TRAPPC11-204ENST00000505676 GRM1Q13255 1194 aa18.65■□□□□ 0.58
TRAPPC11-204ENST00000505676 TTLL4Q14679 1199 aa18.65■□□□□ 0.58
TRAPPC11-204ENST00000505676 C15orf39Q6ZRI6 1047 aa18.65■□□□□ 0.58
TRAPPC11-204ENST00000505676 ASAP3Q8TDY4 903 aa18.65■□□□□ 0.58
TRAPPC11-204ENST00000505676 ZNF526Q8TF50 670 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC11-204ENST00000505676 CCDC127Q96BQ5 260 aa18.65■□□□□ 0.58
TRAPPC11-204ENST00000505676 GPR20Q99678 358 aa18.65■□□□□ 0.58
TRAPPC11-204ENST00000505676 ISCUQ9H1K1 167 aa18.65■□□□□ 0.58
TRAPPC11-204ENST00000505676 AGO2Q9UKV8 859 aaKnown RBP18.65■□□□□ 0.58
TRAPPC11-204ENST00000505676 L1RE1Q9UN81 338 aa18.65■□□□□ 0.58
TRAPPC11-204ENST00000505676 LRRIQ4A6NIV6 560 aa18.65■□□□□ 0.58
TRAPPC11-204ENST00000505676 SPDYE4A6NLX3 237 aa18.65■□□□□ 0.58
TRAPPC11-204ENST00000505676 CETPP11597 493 aa18.65■□□□□ 0.58
TRAPPC11-204ENST00000505676 CBX1P83916 185 aa18.65■□□□□ 0.58
TRAPPC11-204ENST00000505676 MAP2K1Q02750 393 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC11-204ENST00000505676 DLK2Q6UY11 383 aa18.65■□□□□ 0.58
TRAPPC11-204ENST00000505676 FGD4Q96M96 766 aa18.65■□□□□ 0.58
TRAPPC11-204ENST00000505676 SMARCAD1Q9H4L7 1026 aa18.65■□□□□ 0.58
TRAPPC11-204ENST00000505676 VIPAS39Q9H9C1 493 aa18.65■□□□□ 0.58
TRAPPC11-204ENST00000505676 TXNRD2Q9NNW7 524 aa18.65■□□□□ 0.58
TRAPPC11-204ENST00000505676 SOCS7O14512 581 aa18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 GRIN3BO60391 1043 aa18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 RTN2O75298 545 aa18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 GCLCP48506 637 aaPredicted RBP18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 SOX10P56693 466 aa18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 BPIFB4P59827 614 aa18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 SV2AQ7L0J3 742 aa18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 PEX26Q7Z412 305 aa18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 PPM1KQ8N3J5 372 aa18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 ACTRT1Q8TDG2 376 aa18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 SCFD2Q8WU76 684 aa18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 TMEM143Q96AN5 459 aa18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 FAM213AQ9BRX8 229 aa18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 TELO2Q9Y4R8 837 aa18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 LRRN2O75325 713 aa18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 CLSTN1O94985 981 aa18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 FTCDO95954 541 aa18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 TNNC1P63316 161 aa18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 SURF1Q15526 300 aa18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 WDR44Q5JSH3 913 aa18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 CDCA2Q69YH5 1023 aaPredicted RBP18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 PPP1R2P3Q6NXS1 205 aa18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 CCDC62Q6P9F0 684 aa18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 ZNF467Q7Z7K2 595 aaPredicted RBP18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 ZNF677Q86XU0 584 aa18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 ZBTB8OSQ8IWT0 167 aa18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 DHX37Q8IY37 1157 aaKnown RBP18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 GPRC5AQ8NFJ5 357 aa18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 HELQQ8TDG4 1101 aa18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 C1orf112Q9NSG2 853 aa18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 AMFRQ9UKV5 643 aa18.64■□□□□ 0.57
TRAPPC11-204ENST00000505676 MYH10P35580 1976 aa18.63■□□□□ 0.57
TRAPPC11-204ENST00000505676 A0A0B4J269 797 aa18.63■□□□□ 0.57
TRAPPC11-204ENST00000505676 IGKV6-21A0A0C4DH24 114 aa18.63■□□□□ 0.57
TRAPPC11-204ENST00000505676 NCK2O43639 380 aa18.63■□□□□ 0.57
TRAPPC11-204ENST00000505676 SEC31AO94979 1220 aaKnown RBP18.63■□□□□ 0.57
TRAPPC11-204ENST00000505676 PDE6CP51160 858 aa18.63■□□□□ 0.57
TRAPPC11-204ENST00000505676 GTF2A2P52657 109 aa18.63■□□□□ 0.57
TRAPPC11-204ENST00000505676 EPS8L1Q8TE68 723 aa18.63■□□□□ 0.57
TRAPPC11-204ENST00000505676 GLG1Q92896 1179 aa18.63■□□□□ 0.57
TRAPPC11-204ENST00000505676 MRPL4Q9BYD3 311 aaKnown RBP18.63■□□□□ 0.57
TRAPPC11-204ENST00000505676 ABCB6Q9NP58 842 aa18.63■□□□□ 0.57
TRAPPC11-204ENST00000505676 ASAP2O43150 1006 aa18.62■□□□□ 0.57
TRAPPC11-204ENST00000505676 STRNO43815 780 aa18.62■□□□□ 0.57
TRAPPC11-204ENST00000505676 HBP1O60381 514 aa18.62■□□□□ 0.57
TRAPPC11-204ENST00000505676 MTA2O94776 668 aa18.62■□□□□ 0.57
TRAPPC11-204ENST00000505676 C2orf54Q08AI8 447 aa18.62■□□□□ 0.57
TRAPPC11-204ENST00000505676 TFDP1Q14186 410 aa18.62■□□□□ 0.57
TRAPPC11-204ENST00000505676 ZACNQ401N2 412 aa18.62■□□□□ 0.57
TRAPPC11-204ENST00000505676 MOB2Q70IA6 237 aa18.62■□□□□ 0.57
TRAPPC11-204ENST00000505676 ZSWIM2Q8NEG5 633 aa18.62■□□□□ 0.57
TRAPPC11-204ENST00000505676 UBXN6Q9BZV1 441 aa18.62■□□□□ 0.57
TRAPPC11-204ENST00000505676 VTA1Q9NP79 307 aa18.62■□□□□ 0.57
TRAPPC11-204ENST00000505676 STXBP5LQ9Y2K9 1186 aa18.62■□□□□ 0.57
TRAPPC11-204ENST00000505676 PPP2R5EQ16537 467 aa18.62■□□□□ 0.57
TRAPPC11-204ENST00000505676 LY6KQ17RY6 165 aa18.62■□□□□ 0.57
TRAPPC11-204ENST00000505676 Q3C1V9 767 aa18.62■□□□□ 0.57
TRAPPC11-204ENST00000505676 EAPPQ56P03 285 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC11-204ENST00000505676 C11orf63Q6NUN7 778 aa18.62■□□□□ 0.57
TRAPPC11-204ENST00000505676 C8orf74Q6P047 294 aa18.62■□□□□ 0.57
TRAPPC11-204ENST00000505676 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.62■□□□□ 0.57
TRAPPC11-204ENST00000505676 KREMEN1Q96MU8 473 aa18.62■□□□□ 0.57
TRAPPC11-204ENST00000505676 ARID3AQ99856 593 aa18.62■□□□□ 0.57
TRAPPC11-204ENST00000505676 NOCTQ9UK39 431 aaKnown RBP18.62■□□□□ 0.57
TRAPPC11-204ENST00000505676 TTC7AQ9ULT0 858 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC11-204ENST00000505676 CCDC188H7C350 402 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms