RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 NECAB1Q8N987 351 aa17.86■□□□□ 0.45
PDLIM7-213ENST00000505074 PGBD4Q96DM1 585 aa17.86■□□□□ 0.45
PDLIM7-213ENST00000505074 FAM193BQ96PV7 902 aaPredicted RBP17.86■□□□□ 0.45
PDLIM7-213ENST00000505074 CEP89Q96ST8 783 aa17.86■□□□□ 0.45
PDLIM7-213ENST00000505074 LXNQ9BS40 222 aa17.86■□□□□ 0.45
PDLIM7-213ENST00000505074 FAM105AQ9NUU6 356 aa17.86■□□□□ 0.45
PDLIM7-213ENST00000505074 PPP4R2Q9NY27 417 aa17.86■□□□□ 0.45
PDLIM7-213ENST00000505074 FAN1Q9Y2M0 1017 aa17.86■□□□□ 0.45
PDLIM7-213ENST00000505074 PCDHGA2Q9Y5H1 932 aa17.86■□□□□ 0.45
PDLIM7-213ENST00000505074 COL4A3BPQ9Y5P4 624 aa17.86■□□□□ 0.45
PDLIM7-213ENST00000505074 SPTBN2O15020 2390 aa17.86■□□□□ 0.45
PDLIM7-213ENST00000505074 MEIS3P2A8K0S8 358 aa17.85■□□□□ 0.45
PDLIM7-213ENST00000505074 ANHXE9PGG2 379 aa17.85■□□□□ 0.45
PDLIM7-213ENST00000505074 ZNF623O75123 536 aa17.85■□□□□ 0.45
PDLIM7-213ENST00000505074 LRRN2O75325 713 aa17.85■□□□□ 0.45
PDLIM7-213ENST00000505074 SOD2P04179 222 aa17.85■□□□□ 0.45
PDLIM7-213ENST00000505074 CYP4A11Q02928 519 aa17.85■□□□□ 0.45
PDLIM7-213ENST00000505074 ARID2Q68CP9 1835 aa17.85■□□□□ 0.45
PDLIM7-213ENST00000505074 TMEM143Q96AN5 459 aa17.85■□□□□ 0.45
PDLIM7-213ENST00000505074 CHAMP1Q96JM3 812 aa17.85■□□□□ 0.45
PDLIM7-213ENST00000505074 RPS6KC1Q96S38 1066 aa17.85■□□□□ 0.45
PDLIM7-213ENST00000505074 TMEM175Q9BSA9 504 aa17.85■□□□□ 0.45
PDLIM7-213ENST00000505074 MAP1BP46821 2468 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 KANSL1LA0AUZ9 987 aa17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 DCDC2BA2VCK2 349 aa17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 FAM205CA6NFA0 338 aa17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 TBX3O15119 743 aa17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 B4GALT3O60512 393 aa17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 RFPL2O75678 378 aa17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 DDHD2O94830 711 aa17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 CTDNEP1O95476 244 aa17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 ADRB1P08588 477 aa17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 SRGAP2CP0DJJ0 459 aa17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 MYBP10242 640 aa17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 CSTF1Q05048 431 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 NR5A1Q13285 461 aa17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 HTR4Q13639 388 aa17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 TRIM29Q14134 588 aa17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 EPHA7Q15375 998 aa17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 XKR9Q5GH70 373 aa17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 GET4Q7L5D6 327 aaPredicted RBP17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 OTUD6AQ7L8S5 288 aa17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 EXOC8Q8IYI6 725 aa17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 SLFN12Q8IYM2 578 aa17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 ZNF579Q8NAF0 562 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 HDAC7Q8WUI4 952 aa17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 PSPC1Q8WXF1 523 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 DYDC2Q96IM9 177 aa17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 CCDC43Q96MW1 224 aaKnown RBP17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 RGL1Q9NZL6 768 aa17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 KANSL3Q9P2N6 904 aa17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 USP18Q9UMW8 372 aa17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 NUMBLQ9Y6R0 609 aa17.84■□□□□ 0.45
PDLIM7-213ENST00000505074 NRP1O14786 923 aa17.83■□□□□ 0.44
PDLIM7-213ENST00000505074 TEX28O15482 410 aa17.83■□□□□ 0.44
PDLIM7-213ENST00000505074 YWHABP31946 246 aaKnown RBP17.83■□□□□ 0.44
PDLIM7-213ENST00000505074 RFC5P40937 340 aa17.83■□□□□ 0.44
PDLIM7-213ENST00000505074 CTTNQ14247 550 aaKnown RBP17.83■□□□□ 0.44
PDLIM7-213ENST00000505074 EARS2Q5JPH6 523 aaKnown RBP17.83■□□□□ 0.44
PDLIM7-213ENST00000505074 TPH2Q8IWU9 490 aa17.83■□□□□ 0.44
PDLIM7-213ENST00000505074 HAS1Q92839 578 aa17.83■□□□□ 0.44
PDLIM7-213ENST00000505074 ZNF707Q96C28 371 aaPredicted RBP17.83■□□□□ 0.44
PDLIM7-213ENST00000505074 HERC2P3Q9BVR0 1158 aa17.83■□□□□ 0.44
PDLIM7-213ENST00000505074 WRAP73Q9P2S5 460 aaPredicted RBP17.83■□□□□ 0.44
PDLIM7-213ENST00000505074 SMG5Q9UPR3 1016 aaKnown RBP17.83■□□□□ 0.44
PDLIM7-213ENST00000505074 ZFP37Q9Y6Q3 630 aaPredicted RBP17.83■□□□□ 0.44
PDLIM7-213ENST00000505074 GPR179Q6PRD1 2367 aa17.82■□□□□ 0.44
PDLIM7-213ENST00000505074 LARGE1O95461 756 aa17.82■□□□□ 0.44
PDLIM7-213ENST00000505074 MAGEA9P43362 315 aa17.82■□□□□ 0.44
PDLIM7-213ENST00000505074 GLUD2P49448 558 aa17.82■□□□□ 0.44
PDLIM7-213ENST00000505074 GPC5P78333 572 aa17.82■□□□□ 0.44
PDLIM7-213ENST00000505074 SNW1Q13573 536 aaKnown RBP17.82■□□□□ 0.44
PDLIM7-213ENST00000505074 EMC2Q15006 297 aa17.82■□□□□ 0.44
PDLIM7-213ENST00000505074 ME3Q16798 604 aa17.82■□□□□ 0.44
PDLIM7-213ENST00000505074 C4orf19Q8IY42 314 aa17.82■□□□□ 0.44
PDLIM7-213ENST00000505074 ZBTB44Q8NCP5 570 aa17.82■□□□□ 0.44
PDLIM7-213ENST00000505074 TCP11Q8WWU5 503 aa17.82■□□□□ 0.44
PDLIM7-213ENST00000505074 PRPF31Q8WWY3 499 aaKnown RBP17.82■□□□□ 0.44
PDLIM7-213ENST00000505074 GTF3C6Q969F1 213 aa17.82■□□□□ 0.44
PDLIM7-213ENST00000505074 MTRQ99707 1265 aa17.82■□□□□ 0.44
PDLIM7-213ENST00000505074 NT5C3AQ9H0P0 336 aa17.82■□□□□ 0.44
PDLIM7-213ENST00000505074 EPC1Q9H2F5 836 aa17.82■□□□□ 0.44
PDLIM7-213ENST00000505074 PLEKHA4Q9H4M7 779 aa17.82■□□□□ 0.44
PDLIM7-213ENST00000505074 ZSWIM4Q9H7M6 989 aa17.82■□□□□ 0.44
PDLIM7-213ENST00000505074 ZSCAN32Q9NX65 697 aa17.82■□□□□ 0.44
PDLIM7-213ENST00000505074 PPME1Q9Y570 386 aa17.82■□□□□ 0.44
PDLIM7-213ENST00000505074 PAPLNO95428 1278 aa17.81■□□□□ 0.44
PDLIM7-213ENST00000505074 SPATA31D3P0C874 917 aa17.81■□□□□ 0.44
PDLIM7-213ENST00000505074 NEK4P51957 841 aa17.81■□□□□ 0.44
PDLIM7-213ENST00000505074 PRKCQQ04759 706 aa17.81■□□□□ 0.44
PDLIM7-213ENST00000505074 LAMTOR4Q0VGL1 99 aa17.81■□□□□ 0.44
PDLIM7-213ENST00000505074 UBXN2BQ14CS0 331 aa17.81■□□□□ 0.44
PDLIM7-213ENST00000505074 CALCRLQ16602 461 aa17.81■□□□□ 0.44
PDLIM7-213ENST00000505074 SPATA31D4Q6ZUB0 917 aa17.81■□□□□ 0.44
PDLIM7-213ENST00000505074 SRGAP1Q7Z6B7 1085 aa17.81■□□□□ 0.44
PDLIM7-213ENST00000505074 RNF149Q8NC42 400 aa17.81■□□□□ 0.44
PDLIM7-213ENST00000505074 OSBPL6Q9BZF3 934 aa17.81■□□□□ 0.44
PDLIM7-213ENST00000505074 DHX33Q9H6R0 707 aaKnown RBP17.81■□□□□ 0.44
PDLIM7-213ENST00000505074 RSAD1Q9HA92 442 aa17.81■□□□□ 0.44
PDLIM7-213ENST00000505074 IFT122Q9HBG6 1241 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms