RNA–Protein interactions for RNA: ENST00000504679.5

DDR1-254, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 460 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-254ENST00000504679 GLB1LQ6UWU2 654 aa19.9■□□□□ 0.78
DDR1-254ENST00000504679 GLIS3Q8NEA6 775 aa19.9■□□□□ 0.78
DDR1-254ENST00000504679 SPATA20Q8TB22 786 aa19.9■□□□□ 0.78
DDR1-254ENST00000504679 SCFD1Q8WVM8 642 aa19.9■□□□□ 0.78
DDR1-254ENST00000504679 LPPQ93052 612 aa19.9■□□□□ 0.78
DDR1-254ENST00000504679 APOL6Q9BWW8 343 aa19.9■□□□□ 0.78
DDR1-254ENST00000504679 TMEM117Q9H0C3 514 aa19.9■□□□□ 0.78
DDR1-254ENST00000504679 CDT1Q9H211 546 aa19.9■□□□□ 0.78
DDR1-254ENST00000504679 ANKFY1Q9P2R3 1169 aa19.9■□□□□ 0.78
DDR1-254ENST00000504679 PARP2Q9UGN5 583 aa19.9■□□□□ 0.78
DDR1-254ENST00000504679 GIT1Q9Y2X7 761 aa19.9■□□□□ 0.78
DDR1-254ENST00000504679 HES2Q9Y543 173 aa19.9■□□□□ 0.78
DDR1-254ENST00000504679 UBE4BO95155 1302 aa19.9■□□□□ 0.78
DDR1-254ENST00000504679 TBKBP1A7MCY6 615 aa19.89■□□□□ 0.77
DDR1-254ENST00000504679 ANKRD63C9JTQ0 380 aa19.89■□□□□ 0.77
DDR1-254ENST00000504679 MBD3O95983 291 aa19.89■□□□□ 0.77
DDR1-254ENST00000504679 PBX2P40425 430 aa19.89■□□□□ 0.77
DDR1-254ENST00000504679 BTG3Q14201 252 aaPredicted RBP19.89■□□□□ 0.77
DDR1-254ENST00000504679 NOLC1Q14978 699 aaKnown RBP eCLIP19.89■□□□□ 0.77
DDR1-254ENST00000504679 KYAT1Q16773 422 aa19.89■□□□□ 0.77
DDR1-254ENST00000504679 AGMOQ6ZNB7 445 aa19.89■□□□□ 0.77
DDR1-254ENST00000504679 CMTR2Q8IYT2 770 aaKnown RBP19.89■□□□□ 0.77
DDR1-254ENST00000504679 ERCC4Q92889 916 aaPredicted RBP19.89■□□□□ 0.77
DDR1-254ENST00000504679 CCDC94Q9BW85 323 aaPredicted RBP19.89■□□□□ 0.77
DDR1-254ENST00000504679 GBP3Q9H0R5 595 aa19.89■□□□□ 0.77
DDR1-254ENST00000504679 RNF39Q9H2S5 420 aa19.89■□□□□ 0.77
DDR1-254ENST00000504679 NXF3Q9H4D5 531 aaKnown RBP19.89■□□□□ 0.77
DDR1-254ENST00000504679 RSAD1Q9HA92 442 aa19.89■□□□□ 0.77
DDR1-254ENST00000504679 SNTG2Q9NY99 539 aa19.89■□□□□ 0.77
DDR1-254ENST00000504679 STYXL1Q9Y6J8 313 aa19.89■□□□□ 0.77
DDR1-254ENST00000504679 A0A0B4J269 797 aa19.88■□□□□ 0.77
DDR1-254ENST00000504679 ABLIM1O14639 778 aa19.88■□□□□ 0.77
DDR1-254ENST00000504679 OFD1O75665 1012 aa19.88■□□□□ 0.77
DDR1-254ENST00000504679 HARSP12081 509 aaKnown RBP19.88■□□□□ 0.77
DDR1-254ENST00000504679 MYOGP15173 224 aa19.88■□□□□ 0.77
DDR1-254ENST00000504679 PTMSP20962 102 aa19.88■□□□□ 0.77
DDR1-254ENST00000504679 AKAP5P24588 427 aa19.88■□□□□ 0.77
DDR1-254ENST00000504679 GRM5P41594 1212 aa19.88■□□□□ 0.77
DDR1-254ENST00000504679 SNRPFP62306 86 aaKnown RBP19.88■□□□□ 0.77
DDR1-254ENST00000504679 KNOP1Q1ED39 458 aaKnown RBP19.88■□□□□ 0.77
DDR1-254ENST00000504679 BMT2Q1RMZ1 405 aa19.88■□□□□ 0.77
DDR1-254ENST00000504679 ZNF658Q5TYW1 1059 aaPredicted RBP19.88■□□□□ 0.77
DDR1-254ENST00000504679 NELFCDQ8IXH7 590 aa19.88■□□□□ 0.77
DDR1-254ENST00000504679 THNSL1Q8IYQ7 743 aa19.88■□□□□ 0.77
DDR1-254ENST00000504679 FIBCD1Q8N539 461 aa19.88■□□□□ 0.77
DDR1-254ENST00000504679 KIAA0895Q8NCT3 520 aa19.88■□□□□ 0.77
DDR1-254ENST00000504679 URGCPQ8TCY9 931 aa19.88■□□□□ 0.77
DDR1-254ENST00000504679 GPT2Q8TD30 523 aa19.88■□□□□ 0.77
DDR1-254ENST00000504679 HELQQ8TDG4 1101 aa19.88■□□□□ 0.77
DDR1-254ENST00000504679 POMGNT1Q8WZA1 660 aa19.88■□□□□ 0.77
DDR1-254ENST00000504679 ACAP3Q96P50 834 aa19.88■□□□□ 0.77
DDR1-254ENST00000504679 CASD1Q96PB1 797 aa19.88■□□□□ 0.77
DDR1-254ENST00000504679 CLSTN2Q9H4D0 955 aa19.88■□□□□ 0.77
DDR1-254ENST00000504679 SLC28A3Q9HAS3 691 aa19.88■□□□□ 0.77
DDR1-254ENST00000504679 KANSL3Q9P2N6 904 aa19.88■□□□□ 0.77
DDR1-254ENST00000504679 MEIS3P2A8K0S8 358 aa19.87■□□□□ 0.77
DDR1-254ENST00000504679 CA3P07451 260 aa19.87■□□□□ 0.77
DDR1-254ENST00000504679 DNAJB2P25686 324 aa19.87■□□□□ 0.77
DDR1-254ENST00000504679 HOXD13P35453 343 aa19.87■□□□□ 0.77
DDR1-254ENST00000504679 GATMP50440 423 aa19.87■□□□□ 0.77
DDR1-254ENST00000504679 YARSP54577 528 aaKnown RBP19.87■□□□□ 0.77
DDR1-254ENST00000504679 PAN2Q504Q3 1202 aaKnown RBP19.87■□□□□ 0.77
DDR1-254ENST00000504679 CLLU1OSQ5K130 101 aa19.87■□□□□ 0.77
DDR1-254ENST00000504679 SLC39A4Q6P5W5 647 aa19.87■□□□□ 0.77
DDR1-254ENST00000504679 HS2ST1Q7LGA3 356 aa19.87■□□□□ 0.77
DDR1-254ENST00000504679 SP7Q8TDD2 431 aaPredicted RBP19.87■□□□□ 0.77
DDR1-254ENST00000504679 TIFAQ96CG3 184 aa19.87■□□□□ 0.77
DDR1-254ENST00000504679 MSTO1Q9BUK6 570 aa19.87■□□□□ 0.77
DDR1-254ENST00000504679 NUP62CLQ9H1M0 184 aa19.87■□□□□ 0.77
DDR1-254ENST00000504679 RNF19AQ9NV58 838 aa19.87■□□□□ 0.77
DDR1-254ENST00000504679 KIAA1468Q9P260 1216 aa19.87■□□□□ 0.77
DDR1-254ENST00000504679 CGNQ9P2M7 1197 aaKnown RBP19.87■□□□□ 0.77
DDR1-254ENST00000504679 AGO2Q9UKV8 859 aaKnown RBP19.87■□□□□ 0.77
DDR1-254ENST00000504679 GDAQ9Y2T3 454 aa19.87■□□□□ 0.77
DDR1-254ENST00000504679 YBX2Q9Y2T7 364 aaKnown RBP19.87■□□□□ 0.77
DDR1-254ENST00000504679 TRIOBPQ9H2D6 2365 aa19.86■□□□□ 0.77
DDR1-254ENST00000504679 ARL5CA6NH57 179 aa19.86■□□□□ 0.77
DDR1-254ENST00000504679 OGTO15294 1046 aa19.86■□□□□ 0.77
DDR1-254ENST00000504679 GARTP22102 1010 aa19.86■□□□□ 0.77
DDR1-254ENST00000504679 OSTNP61366 133 aa19.86■□□□□ 0.77
DDR1-254ENST00000504679 NOMO2Q5JPE7 1267 aa19.86■□□□□ 0.77
DDR1-254ENST00000504679 MRPL9Q9BYD2 267 aaKnown RBP19.86■□□□□ 0.77
DDR1-254ENST00000504679 HAPLN2Q9GZV7 340 aa19.86■□□□□ 0.77
DDR1-254ENST00000504679 IKZF4Q9H2S9 585 aa19.86■□□□□ 0.77
DDR1-254ENST00000504679 NKX2-4Q9H2Z4 354 aa19.86■□□□□ 0.77
DDR1-254ENST00000504679 RC3H2Q9HBD1 1191 aaKnown RBP19.86■□□□□ 0.77
DDR1-254ENST00000504679 TOPORSQ9NS56 1045 aaPredicted RBP19.86■□□□□ 0.77
DDR1-254ENST00000504679 INPP5FQ9Y2H2 1132 aa19.86■□□□□ 0.77
DDR1-254ENST00000504679 GBF1Q92538 1859 aa19.86■□□□□ 0.77
DDR1-254ENST00000504679 LCHNA4D1U4 455 aa19.85■□□□□ 0.77
DDR1-254ENST00000504679 KIAA0391O15091 583 aaKnown RBP19.85■□□□□ 0.77
DDR1-254ENST00000504679 LDHAP00338 332 aaKnown RBP19.85■□□□□ 0.77
DDR1-254ENST00000504679 CLTAP09496 248 aa19.85■□□□□ 0.77
DDR1-254ENST00000504679 ADSSP30520 456 aa19.85■□□□□ 0.77
DDR1-254ENST00000504679 SPOUT1Q5T280 376 aaKnown RBP19.85■□□□□ 0.77
DDR1-254ENST00000504679 ISM2Q6H9L7 571 aa19.85■□□□□ 0.77
DDR1-254ENST00000504679 ARMCX5Q6P1M9 558 aa19.85■□□□□ 0.77
DDR1-254ENST00000504679 GUF1Q8N442 669 aaKnown RBP19.85■□□□□ 0.77
DDR1-254ENST00000504679 GOLGA5Q8TBA6 731 aa19.85■□□□□ 0.77
DDR1-254ENST00000504679 GAD1Q99259 594 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms