RNA–Protein interactions for RNA: ENST00000504627.1

SQSTM1-209, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-209ENST00000504627 FXR2P51116 673 aaKnown RBP eCLIP19.88■□□□□ 0.772e-7■■□□□ 14
SQSTM1-209ENST00000504627 ATP2C1P98194 919 aaPredicted RBP19.88■□□□□ 0.77
SQSTM1-209ENST00000504627 AMHR2Q16671 573 aa19.88■□□□□ 0.77
SQSTM1-209ENST00000504627 TMEM132AQ24JP5 1023 aa19.88■□□□□ 0.77
SQSTM1-209ENST00000504627 TPRNQ4KMQ1 711 aa19.88■□□□□ 0.77
SQSTM1-209ENST00000504627 SLC27A1Q6PCB7 646 aa19.88■□□□□ 0.77
SQSTM1-209ENST00000504627 PADI6Q6TGC4 694 aa19.88■□□□□ 0.77
SQSTM1-209ENST00000504627 BCL7CQ8WUZ0 217 aaPredicted RBP19.88■□□□□ 0.77
SQSTM1-209ENST00000504627 TMEM175Q9BSA9 504 aa19.88■□□□□ 0.77
SQSTM1-209ENST00000504627 RAB34Q9BZG1 259 aa19.88■□□□□ 0.77
SQSTM1-209ENST00000504627 RNF39Q9H2S5 420 aa19.88■□□□□ 0.77
SQSTM1-209ENST00000504627 PRMT7Q9NVM4 692 aaPredicted RBP19.88■□□□□ 0.77
SQSTM1-209ENST00000504627 MUTYHQ9UIF7 546 aa19.88■□□□□ 0.77
SQSTM1-209ENST00000504627 ARL5CA6NH57 179 aa19.87■□□□□ 0.77
SQSTM1-209ENST00000504627 PRR33A8MZF0 331 aa19.87■□□□□ 0.77
SQSTM1-209ENST00000504627 LAD1O00515 517 aa19.87■□□□□ 0.77
SQSTM1-209ENST00000504627 NRP1O14786 923 aa19.87■□□□□ 0.77
SQSTM1-209ENST00000504627 B4GALT5O43286 388 aa19.87■□□□□ 0.77
SQSTM1-209ENST00000504627 B4GALT3O60512 393 aa19.87■□□□□ 0.77
SQSTM1-209ENST00000504627 NPTXRO95502 500 aa19.87■□□□□ 0.77
SQSTM1-209ENST00000504627 MUTP22033 750 aa19.87■□□□□ 0.77
SQSTM1-209ENST00000504627 OR1G1P47890 313 aa19.87■□□□□ 0.77
SQSTM1-209ENST00000504627 ME1P48163 572 aa19.87■□□□□ 0.77
SQSTM1-209ENST00000504627 PTGDRQ13258 359 aa19.87■□□□□ 0.77
SQSTM1-209ENST00000504627 CBX2Q14781 532 aaPredicted RBP19.87■□□□□ 0.77
SQSTM1-209ENST00000504627 SKOR2Q2VWA4 1001 aaPredicted RBP19.87■□□□□ 0.77
SQSTM1-209ENST00000504627 SYCE2Q6PIF2 218 aa19.87■□□□□ 0.77
SQSTM1-209ENST00000504627 CDR2LQ86X02 465 aaPredicted RBP19.87■□□□□ 0.77
SQSTM1-209ENST00000504627 SUSD6Q92537 303 aa19.87■□□□□ 0.77
SQSTM1-209ENST00000504627 GAD1Q99259 594 aa19.87■□□□□ 0.77
SQSTM1-209ENST00000504627 S1PR5Q9H228 398 aa19.87■□□□□ 0.77
SQSTM1-209ENST00000504627 STK24Q9Y6E0 443 aa19.87■□□□□ 0.77
SQSTM1-209ENST00000504627 GOLGA6L4A6NEF3 574 aa19.86■□□□□ 0.77
SQSTM1-209ENST00000504627 LOC730098B7Z3J9 87 aa19.86■□□□□ 0.77
SQSTM1-209ENST00000504627 NR1I2O75469 434 aa19.86■□□□□ 0.77
SQSTM1-209ENST00000504627 SSBP05455 408 aaKnown RBP eCLIP19.86■□□□□ 0.77
SQSTM1-209ENST00000504627 CYP11B2P19099 503 aa19.86■□□□□ 0.77
SQSTM1-209ENST00000504627 PDIA5Q14554 519 aa19.86■□□□□ 0.77
SQSTM1-209ENST00000504627 CES5AQ6NT32 575 aa19.86■□□□□ 0.77
SQSTM1-209ENST00000504627 C4orf32Q8N8J7 132 aa19.86■□□□□ 0.77
SQSTM1-209ENST00000504627 PRIMPOLQ96LW4 560 aa19.86■□□□□ 0.77
SQSTM1-209ENST00000504627 ZFP42Q96MM3 310 aa19.86■□□□□ 0.77
SQSTM1-209ENST00000504627 C2orf40Q9H1Z8 148 aa19.86■□□□□ 0.77
SQSTM1-209ENST00000504627 NXF3Q9H4D5 531 aaKnown RBP19.86■□□□□ 0.77
SQSTM1-209ENST00000504627 PARP2Q9UGN5 583 aa19.86■□□□□ 0.77
SQSTM1-209ENST00000504627 GIT1Q9Y2X7 761 aa19.86■□□□□ 0.77
SQSTM1-209ENST00000504627 PRG3Q9Y2Y8 225 aaPredicted RBP19.86■□□□□ 0.77
SQSTM1-209ENST00000504627 IRAK3Q9Y616 596 aa19.86■□□□□ 0.77
SQSTM1-209ENST00000504627 A0A1B0GUA9 196 aa19.85■□□□□ 0.77
SQSTM1-209ENST00000504627 A0A1W2PQ27 194 aa19.85■□□□□ 0.77
SQSTM1-209ENST00000504627 A0A1W2PQ64 194 aa19.85■□□□□ 0.77
SQSTM1-209ENST00000504627 A0A1W2PQD8 194 aa19.85■□□□□ 0.77
SQSTM1-209ENST00000504627 GADD45BO75293 160 aaPredicted RBP19.85■□□□□ 0.77
SQSTM1-209ENST00000504627 LIG1P18858 919 aa19.85■□□□□ 0.77
SQSTM1-209ENST00000504627 AKAP5P24588 427 aa19.85■□□□□ 0.77
SQSTM1-209ENST00000504627 SCNN1GP51170 649 aa19.85■□□□□ 0.77
SQSTM1-209ENST00000504627 KLHL40Q2TBA0 621 aa19.85■□□□□ 0.77
SQSTM1-209ENST00000504627 HERC4Q5GLZ8 1057 aaPredicted RBP19.85■□□□□ 0.77
SQSTM1-209ENST00000504627 ARL6IP4Q66PJ3 421 aaKnown RBP19.85■□□□□ 0.77
SQSTM1-209ENST00000504627 KRI1Q8N9T8 703 aaKnown RBP19.85■□□□□ 0.77
SQSTM1-209ENST00000504627 DEPTORQ8TB45 409 aa19.85■□□□□ 0.77
SQSTM1-209ENST00000504627 SNX29Q8TEQ0 813 aa19.85■□□□□ 0.77
SQSTM1-209ENST00000504627 EMILIN2Q9BXX0 1053 aa19.85■□□□□ 0.77
SQSTM1-209ENST00000504627 BHMT2Q9H2M3 363 aa19.85■□□□□ 0.77
SQSTM1-209ENST00000504627 PCDHA7Q9UN72 937 aa19.85■□□□□ 0.77
SQSTM1-209ENST00000504627 KIAA1024Q9UPX6 916 aa19.85■□□□□ 0.77
SQSTM1-209ENST00000504627 SPDYE4A6NLX3 237 aa19.84■□□□□ 0.77
SQSTM1-209ENST00000504627 CUTAO60888 179 aa19.84■□□□□ 0.77
SQSTM1-209ENST00000504627 PRPHP41219 470 aa19.84■□□□□ 0.77
SQSTM1-209ENST00000504627 ITIH3Q06033 890 aa19.84■□□□□ 0.77
SQSTM1-209ENST00000504627 PPP2R5AQ15172 486 aa19.84■□□□□ 0.77
SQSTM1-209ENST00000504627 ECM1Q16610 540 aa19.84■□□□□ 0.77
SQSTM1-209ENST00000504627 MAPK6Q16659 721 aa19.84■□□□□ 0.77
SQSTM1-209ENST00000504627 KRT79Q5XKE5 535 aa19.84■□□□□ 0.77
SQSTM1-209ENST00000504627 CDCA2Q69YH5 1023 aaPredicted RBP19.84■□□□□ 0.77
SQSTM1-209ENST00000504627 ADALQ6DHV7 355 aa19.84■□□□□ 0.77
SQSTM1-209ENST00000504627 PPP4R3CPQ6ZMV5 832 aa19.84■□□□□ 0.77
SQSTM1-209ENST00000504627 PPFIBP1Q86W92 1011 aa19.84■□□□□ 0.77
SQSTM1-209ENST00000504627 COLGALT2Q8IYK4 626 aa19.84■□□□□ 0.77
SQSTM1-209ENST00000504627 IFT74Q96LB3 600 aa19.84■□□□□ 0.77
SQSTM1-209ENST00000504627 VN1R3Q9BXE9 311 aa19.84■□□□□ 0.77
SQSTM1-209ENST00000504627 MRPL17Q9NRX2 175 aaKnown RBP19.84■□□□□ 0.77
SQSTM1-209ENST00000504627 DDX19AQ9NUU7 478 aaKnown RBP19.84■□□□□ 0.77
SQSTM1-209ENST00000504627 FBXO2Q9UK22 296 aaPredicted RBP19.84■□□□□ 0.77
SQSTM1-209ENST00000504627 INPPL1O15357 1258 aa19.83■□□□□ 0.77
SQSTM1-209ENST00000504627 KLRC2P26717 231 aa19.83■□□□□ 0.77
SQSTM1-209ENST00000504627 MARCKSP29966 332 aaPredicted RBP19.83■□□□□ 0.77
SQSTM1-209ENST00000504627 NAMPTP43490 491 aa19.83■□□□□ 0.77
SQSTM1-209ENST00000504627 PRPF4BQ13523 1007 aaKnown RBP19.83■□□□□ 0.77
SQSTM1-209ENST00000504627 PTPN14Q15678 1187 aa19.83■□□□□ 0.77
SQSTM1-209ENST00000504627 AXDND1Q5T1B0 1012 aaPredicted RBP19.83■□□□□ 0.77
SQSTM1-209ENST00000504627 DTHD1Q6ZMT9 781 aa19.83■□□□□ 0.77
SQSTM1-209ENST00000504627 IGSF22Q8N9C0 903 aa19.83■□□□□ 0.77
SQSTM1-209ENST00000504627 BSNDQ8WZ55 320 aa19.83■□□□□ 0.77
SQSTM1-209ENST00000504627 RPS6KC1Q96S38 1066 aa19.83■□□□□ 0.77
SQSTM1-209ENST00000504627 ADAM7Q9H2U9 754 aa19.83■□□□□ 0.77
SQSTM1-209ENST00000504627 FZD8Q9H461 694 aa19.83■□□□□ 0.77
SQSTM1-209ENST00000504627 DZANK1Q9NVP4 752 aa19.83■□□□□ 0.77
SQSTM1-209ENST00000504627 MIOSQ9NXC5 875 aa19.83■□□□□ 0.77
SQSTM1-209ENST00000504627 SRPRBQ9Y5M8 271 aaKnown RBP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms