RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 GDPD5Q8WTR4 605 aa8.55□□□□□ -1.04
SKP2-203ENST00000504386 DDX12PQ92771 950 aa8.55□□□□□ -1.04
SKP2-203ENST00000504386 CPB2Q96IY4 423 aa8.55□□□□□ -1.04
SKP2-203ENST00000504386 UROC1Q96N76 676 aa8.55□□□□□ -1.04
SKP2-203ENST00000504386 COLEC11Q9BWP8 271 aa8.55□□□□□ -1.04
SKP2-203ENST00000504386 PDZD7Q9H5P4 517 aa8.55□□□□□ -1.04
SKP2-203ENST00000504386 TMEM206Q9H813 350 aa8.55□□□□□ -1.04
SKP2-203ENST00000504386 TLR9Q9NR96 1032 aa8.55□□□□□ -1.04
SKP2-203ENST00000504386 OLFML3Q9NRN5 406 aa8.55□□□□□ -1.04
SKP2-203ENST00000504386 TBC1D13Q9NVG8 400 aa8.55□□□□□ -1.04
SKP2-203ENST00000504386 PARP2Q9UGN5 583 aa8.55□□□□□ -1.04
SKP2-203ENST00000504386 HOOK1Q9UJC3 728 aaKnown RBP8.55□□□□□ -1.04
SKP2-203ENST00000504386 KCNH3Q9ULD8 1083 aa8.55□□□□□ -1.04
SKP2-203ENST00000504386 PCDHA7Q9UN72 937 aa8.55□□□□□ -1.04
SKP2-203ENST00000504386 PLAGL2Q9UPG8 496 aa8.55□□□□□ -1.04
SKP2-203ENST00000504386 RALGAPA2Q2PPJ7 1873 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 A0A1W2PQ27 194 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 A0A1W2PQ64 194 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 A0A1W2PQD8 194 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 ARL5CA6NH57 179 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 B4GALT5O43286 388 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 ZC3H11AO75152 810 aaKnown RBP eCLIP8.54□□□□□ -1.04
SKP2-203ENST00000504386 FGF18O76093 207 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 KIF20AO95235 890 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 PIGRP01833 764 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 THP07101 528 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 SLFN14P0C7P3 912 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 IDEP14735 1019 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 GRM5P41594 1212 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 MATR3P43243 847 aaKnown RBP eCLIP8.54□□□□□ -1.046e-7■■■■□ 23.7
SKP2-203ENST00000504386 RAD51AP2Q09MP3 1159 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 ARSHQ5FYA8 562 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 HERC4Q5GLZ8 1057 aaPredicted RBP8.54□□□□□ -1.04
SKP2-203ENST00000504386 SPECC1Q5M775 1068 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 RESP18Q5W5W9 173 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 KANK3Q6NY19 840 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 CNNM4Q6P4Q7 775 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 AGMOQ6ZNB7 445 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 DDX53Q86TM3 631 aaKnown RBP8.54□□□□□ -1.04
SKP2-203ENST00000504386 CD302Q8IX05 232 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 DAW1Q8N136 415 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 PDILTQ8N807 584 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 KLHL23Q8NBE8 558 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 SMG8Q8ND04 991 aaKnown RBP8.54□□□□□ -1.04
SKP2-203ENST00000504386 MICAL1Q8TDZ2 1067 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 LEO1Q8WVC0 666 aaPredicted RBP8.54□□□□□ -1.04
SKP2-203ENST00000504386 ATXN2LQ8WWM7 1075 aaKnown RBP8.54□□□□□ -1.04
SKP2-203ENST00000504386 MRPS27Q92552 414 aaKnown RBP8.54□□□□□ -1.04
SKP2-203ENST00000504386 DHX58Q96C10 678 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 ACAP3Q96P50 834 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 ACCSQ96QU6 501 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 ACO2Q99798 780 aaKnown RBP8.54□□□□□ -1.04
SKP2-203ENST00000504386 KIFC3Q9BVG8 833 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 APOL6Q9BWW8 343 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 EIF2AQ9BY44 585 aaKnown RBP8.54□□□□□ -1.04
SKP2-203ENST00000504386 GTPBP4Q9BZE4 634 aaKnown RBP8.54□□□□□ -1.04
SKP2-203ENST00000504386 CWH43Q9H720 699 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 MRPL44Q9H9J2 332 aaKnown RBP8.54□□□□□ -1.04
SKP2-203ENST00000504386 PLEKHA5Q9HAU0 1116 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 KBTBD4Q9NVX7 518 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 THEGQ9P2T0 379 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 DPP7Q9UHL4 492 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 TBX20Q9UMR3 447 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 FAN1Q9Y2M0 1017 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 MYO9BQ13459 2157 aa8.54□□□□□ -1.04
SKP2-203ENST00000504386 PVALEFA0A1B0GWK0 134 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 ARHGEF37A1IGU5 675 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 SFI1A8K8P3 1242 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 POLR2DO15514 142 aaKnown RBP8.53□□□□□ -1.04
SKP2-203ENST00000504386 TRAPPC3O43617 180 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 ARHGEF15O94989 841 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 ITGB1P05556 798 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 CLTAP09496 248 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 PAX3P23760 479 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 MLH1P40692 756 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 SYKP43405 635 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 BCAR1P56945 870 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 SNRPFP62306 86 aaKnown RBP8.53□□□□□ -1.04
SKP2-203ENST00000504386 ASIC1P78348 528 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 GTF2BQ00403 316 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 TUSC3Q13454 348 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 PKP1Q13835 747 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 ADGRE1Q14246 886 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 SMC1AQ14683 1233 aaKnown RBP8.53□□□□□ -1.04
SKP2-203ENST00000504386 FOXD4L6Q3SYB3 417 aaPredicted RBP8.53□□□□□ -1.04
SKP2-203ENST00000504386 AXDND1Q5T1B0 1012 aaPredicted RBP8.53□□□□□ -1.04
SKP2-203ENST00000504386 PDXDC1Q6P996 788 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 SHC4Q6S5L8 630 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 FOXD4L3Q6VB84 417 aaPredicted RBP8.53□□□□□ -1.04
SKP2-203ENST00000504386 USP49Q70CQ1 688 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 DYMQ7RTS9 669 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 PPFIBP1Q86W92 1011 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 MAP4K3Q8IVH8 894 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 GPR65Q8IYL9 337 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 SLC39A11Q8N1S5 342 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 SPPL3Q8TCT6 385 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 POF1BQ8WVV4 589 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 LPPQ93052 612 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 HLA-CQ95604 372 aa8.53□□□□□ -1.04
SKP2-203ENST00000504386 DDX27Q96GQ7 796 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms