RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 PPP2R3AQ06190 1150 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 MCL1Q07820 350 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 STRN3Q13033 797 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 TFDP1Q14186 410 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 KCNA10Q16322 511 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 MAPK6Q16659 721 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 FAM187BQ17R55 369 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 KIZQ2M2Z5 673 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 NBPF20Q3BBV1 942 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 SEZ6Q53EL9 994 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 FIGNQ5HY92 759 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 FKBP15Q5T1M5 1219 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 TCERG1LQ5VWI1 586 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 SCARA3Q6AZY7 606 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 GDF6Q6KF10 455 aaPredicted RBP7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 WDR59Q6PJI9 974 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 TSHZ1Q6ZSZ6 1077 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 INTS8Q75QN2 995 aaKnown RBP7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 SESTD1Q86VW0 696 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 CDR2LQ86X02 465 aaPredicted RBP7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 ZBTB8OSQ8IWT0 167 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 GPD1LQ8N335 351 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 DNAJC5GQ8N7S2 189 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 CEP120Q8N960 986 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 SLAIN1Q8ND83 568 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 LMO3Q8TAP4 145 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 KIAA1524Q8TCG1 905 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 PARD3BQ8TEW8 1205 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 SH3TC2Q8TF17 1288 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 TMEM40Q8WWA1 233 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 PANX2Q96RD6 677 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 POP1Q99575 1024 aaKnown RBP7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 DNAJC7Q99615 494 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 FAM213AQ9BRX8 229 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 KATNAL1Q9BW62 490 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 LSM14BQ9BX40 385 aaKnown RBP7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 MRPL4Q9BYD3 311 aaKnown RBP7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 INO80BQ9C086 356 aaPredicted RBP7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 C2orf40Q9H1Z8 148 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 RRAGDQ9NQL2 400 aaPredicted RBP7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 FAM207AQ9NSI2 230 aaPredicted RBP7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 ABHD10Q9NUJ1 306 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 ANKFY1Q9P2R3 1169 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 GTF2IRD1Q9UHL9 959 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 AGO2Q9UKV8 859 aaKnown RBP7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 CAPN11Q9UMQ6 739 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 TRIM17Q9Y577 477 aa7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.52□□□□□ -1.21
TOPBP1-203ENST00000503464 GTPBP10A4D1E9 387 aaKnown RBP7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 TOM1L1O75674 476 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 TPM2P07951 284 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 SKILP12757 684 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 ARF4P18085 180 aaPredicted RBP7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 TMOD1P28289 359 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 GRK4P32298 578 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 KRT9P35527 623 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 PHKA2P46019 1235 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 GCLMP48507 274 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 PRMT2P55345 433 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 C1QTNF8P60827 252 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 CLDN10P78369 228 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 MAP2K1Q02750 393 aaPredicted RBP7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 PRPF4BQ13523 1007 aaKnown RBP7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 TRIM14Q14142 442 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 MTF1Q14872 753 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 PSMD6Q15008 389 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 EPC2Q52LR7 807 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 ATF7IP2Q5U623 682 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 GJB7Q6PEY0 223 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 TRIM65Q6PJ69 517 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 RAD9BQ6WBX8 426 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 C15orf39Q6ZRI6 1047 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 ZBTB33Q86T24 672 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 ZNF410Q86VK4 478 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 PPFIBP1Q86W92 1011 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 TMEM192Q8IY95 271 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 TMC2Q8TDI7 906 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 DNAJB3Q8WWF6 145 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 ZNF516Q92618 1163 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 SEMA4DQ92854 862 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 CCDC127Q96BQ5 260 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 CPB2Q96IY4 423 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 MAP7D2Q96T17 732 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 OSMRQ99650 979 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 MSTO1Q9BUK6 570 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 NAA15Q9BXJ9 866 aaKnown RBP7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 OSBPL7Q9BZF2 842 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 TMEM117Q9H0C3 514 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 UNC93B1Q9H1C4 597 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 CDT1Q9H211 546 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 PDZD7Q9H5P4 517 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 PLCB1Q9NQ66 1216 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 PRMT7Q9NVM4 692 aaPredicted RBP7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 CPSF3Q9UKF6 684 aaKnown RBP7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 TNFSF13BQ9Y275 285 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 PTPN22Q9Y2R2 807 aa7.51□□□□□ -1.21
TOPBP1-203ENST00000503464 TANC1Q9C0D5 1861 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 SOWAHDA6NJG2 315 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 LRRC53A6NM62 1247 aa7.5□□□□□ -1.21
TOPBP1-203ENST00000503464 USP27XA6NNY8 438 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms