RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 FAM228AQ86W67 206 aa5.73□□□□□ -1.49
HTT-202ENST00000502820 ECHDC2Q86YB7 292 aa5.73□□□□□ -1.49
HTT-202ENST00000502820 ZNF654Q8IZM8 581 aa5.73□□□□□ -1.49
HTT-202ENST00000502820 NME8Q8N427 588 aa5.73□□□□□ -1.49
HTT-202ENST00000502820 KDF1Q8NAX2 398 aaPredicted RBP5.73□□□□□ -1.49
HTT-202ENST00000502820 GIMAP8Q8ND71 665 aaPredicted RBP5.73□□□□□ -1.49
HTT-202ENST00000502820 CUL5Q93034 780 aa5.73□□□□□ -1.49
HTT-202ENST00000502820 LPPQ93052 612 aa5.73□□□□□ -1.49
HTT-202ENST00000502820 BORCS6Q96GS4 357 aa5.73□□□□□ -1.49
HTT-202ENST00000502820 FAM193BQ96PV7 902 aaPredicted RBP5.73□□□□□ -1.49
HTT-202ENST00000502820 SCNM1Q9BWG6 230 aa5.73□□□□□ -1.49
HTT-202ENST00000502820 SPZ1Q9BXG8 430 aa5.73□□□□□ -1.49
HTT-202ENST00000502820 NAT10Q9H0A0 1025 aaKnown RBP5.73□□□□□ -1.49
HTT-202ENST00000502820 SLC2A4RGQ9NR83 387 aa5.73□□□□□ -1.49
HTT-202ENST00000502820 MAP3K20Q9NYL2 800 aaKnown RBP5.73□□□□□ -1.49
HTT-202ENST00000502820 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.73□□□□□ -1.49
HTT-202ENST00000502820 ANKFY1Q9P2R3 1169 aa5.73□□□□□ -1.49
HTT-202ENST00000502820 EPS15L1Q9UBC2 864 aa5.73□□□□□ -1.49
HTT-202ENST00000502820 AKT3Q9Y243 479 aa5.73□□□□□ -1.49
HTT-202ENST00000502820 MRPS17Q9Y2R5 130 aaKnown RBP5.73□□□□□ -1.49
HTT-202ENST00000502820 SQORQ9Y6N5 450 aa5.73□□□□□ -1.49
HTT-202ENST00000502820 MAP1BP46821 2468 aaKnown RBP5.73□□□□□ -1.49
HTT-202ENST00000502820 SPTBN2O15020 2390 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 PNMA6FA0A0J9YX94 578 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 SMIM35A0A1B0GVV1 85 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 ERICH2A1L162 156 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 A6NNZ2 444 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 CYSRT1A8MQ03 144 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 TAF4O00268 1085 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 HRO43593 1189 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 PRC1O43663 620 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 GAS2O43903 313 aaKnown RBP5.72□□□□□ -1.49
HTT-202ENST00000502820 CSDE1O75534 798 aaKnown RBP5.72□□□□□ -1.49
HTT-202ENST00000502820 CPP00450 1065 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 GUCY2CP25092 1073 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 SMARCA1P28370 1054 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 HSPA4P34932 840 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 MAGEA9P43362 315 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 STAT5BP51692 787 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 GTF2A1P52655 376 aaPredicted RBP5.72□□□□□ -1.49
HTT-202ENST00000502820 CRYBB1P53674 252 aaPredicted RBP5.72□□□□□ -1.49
HTT-202ENST00000502820 PFKPQ01813 784 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 SATB1Q01826 763 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 PRKCQQ04759 706 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 TYRO3Q06418 890 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 TRAF1Q13077 416 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 MTMR1Q13613 665 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 HTR4Q13639 388 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 COL28A1Q2UY09 1125 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 UAP1L1Q3KQV9 507 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 TSGA10IPQ3SY00 556 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 TUBB8Q3ZCM7 444 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 SH3PXD2AQ5TCZ1 1133 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 FBXO38Q6PIJ6 1188 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 DDX53Q86TM3 631 aaKnown RBP5.72□□□□□ -1.49
HTT-202ENST00000502820 PDZD3Q86UT5 571 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 SGMS1Q86VZ5 419 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 DRC7Q8IY82 874 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 FAM160A2Q8N612 972 aaPredicted RBP5.72□□□□□ -1.49
HTT-202ENST00000502820 FBXO18Q8NFZ0 1043 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 BCL7CQ8WUZ0 217 aaPredicted RBP5.72□□□□□ -1.49
HTT-202ENST00000502820 HNRNPLLQ8WVV9 542 aaKnown RBP5.72□□□□□ -1.49
HTT-202ENST00000502820 ING5Q8WYH8 240 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 IGSF21Q96ID5 467 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 LRIG1Q96JA1 1093 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 TMEM87BQ96K49 555 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 C16orf45Q96MC5 204 aaPredicted RBP5.72□□□□□ -1.49
HTT-202ENST00000502820 INPP4AQ96PE3 977 aaPredicted RBP5.72□□□□□ -1.49
HTT-202ENST00000502820 PIGSQ96S52 555 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 PHF20Q9BVI0 1012 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 MRPL9Q9BYD2 267 aaKnown RBP5.72□□□□□ -1.49
HTT-202ENST00000502820 FAM126AQ9BYI3 521 aaPredicted RBP5.72□□□□□ -1.49
HTT-202ENST00000502820 UBXN6Q9BZV1 441 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 TRIM5Q9C035 493 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 ELAC1Q9H777 363 aaKnown RBP5.72□□□□□ -1.49
HTT-202ENST00000502820 LMAN1LQ9HAT1 526 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 ANO2Q9NQ90 1003 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 DNAJB4Q9UDY4 337 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 DPP7Q9UHL4 492 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 DNAI1Q9UI46 699 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 LIMCH1Q9UPQ0 1083 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 SMC3Q9UQE7 1217 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 PRG3Q9Y2Y8 225 aaPredicted RBP5.72□□□□□ -1.49
HTT-202ENST00000502820 ATG2AQ2TAZ0 1938 aa5.72□□□□□ -1.49
HTT-202ENST00000502820 CCDC196A0A1B0GTZ2 297 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 TMEM8BA6NDV4 472 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 GOLGA6L4A6NEF3 574 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 C4orf47A7E2U8 309 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 MYO1CO00159 1063 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 PIK3CDO00329 1044 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 HYAL3O43820 417 aaPredicted RBP5.71□□□□□ -1.5
HTT-202ENST00000502820 FOXD2O60548 495 aaPredicted RBP5.71□□□□□ -1.5
HTT-202ENST00000502820 LRP3O75074 770 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 STAM2O75886 525 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 ZRANB2O95218 330 aaKnown RBP eCLIP5.71□□□□□ -1.5
HTT-202ENST00000502820 PRB1P04280 392 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 ALDH2P05091 517 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 ADH1AP07327 375 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 GALTP07902 379 aa5.71□□□□□ -1.5
HTT-202ENST00000502820 PNMA6AP0CW24 399 aaPredicted RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms