RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 HAS1Q92839 578 aa4.45□□□□□ -1.7
PSPC1-205ENST00000497722 SLC5A5Q92911 643 aa4.45□□□□□ -1.7
PSPC1-205ENST00000497722 VOPP1Q96AW1 172 aa4.45□□□□□ -1.7
PSPC1-205ENST00000497722 IL17RAQ96F46 866 aa4.45□□□□□ -1.7
PSPC1-205ENST00000497722 CRAMP1Q96RY5 1269 aa4.45□□□□□ -1.7
PSPC1-205ENST00000497722 MLST8Q9BVC4 326 aa4.45□□□□□ -1.7
PSPC1-205ENST00000497722 ANO3Q9BYT9 981 aa4.45□□□□□ -1.7
PSPC1-205ENST00000497722 NRDE2Q9H7Z3 1164 aa4.45□□□□□ -1.7
PSPC1-205ENST00000497722 PCDH12Q9NPG4 1184 aa4.45□□□□□ -1.7
PSPC1-205ENST00000497722 DKK2Q9UBU2 259 aa4.45□□□□□ -1.7
PSPC1-205ENST00000497722 NOP58Q9Y2X3 529 aaKnown RBP4.45□□□□□ -1.7
PSPC1-205ENST00000497722 COL4A3Q01955 1670 aa4.45□□□□□ -1.7
PSPC1-205ENST00000497722 PPM1GO15355 546 aaPredicted RBP4.44□□□□□ -1.7
PSPC1-205ENST00000497722 KDM1AO60341 852 aa4.44□□□□□ -1.7
PSPC1-205ENST00000497722 LTA4HP09960 611 aaKnown RBP4.44□□□□□ -1.7
PSPC1-205ENST00000497722 SESN3P58005 492 aa4.44□□□□□ -1.7
PSPC1-205ENST00000497722 PPARAQ07869 468 aa4.44□□□□□ -1.7
PSPC1-205ENST00000497722 ITKQ08881 620 aa4.44□□□□□ -1.7
PSPC1-205ENST00000497722 MGAT5Q09328 741 aa4.44□□□□□ -1.7
PSPC1-205ENST00000497722 FAPQ12884 760 aa4.44□□□□□ -1.7
PSPC1-205ENST00000497722 ABHD15Q6UXT9 468 aa4.44□□□□□ -1.7
PSPC1-205ENST00000497722 FAM83AQ86UY5 434 aa4.44□□□□□ -1.7
PSPC1-205ENST00000497722 DDX42Q86XP3 938 aaKnown RBP eCLIP4.44□□□□□ -1.7
PSPC1-205ENST00000497722 SPATS2Q86XZ4 545 aaKnown RBP4.44□□□□□ -1.7
PSPC1-205ENST00000497722 AFAP1L2Q8N4X5 818 aa4.44□□□□□ -1.7
PSPC1-205ENST00000497722 OR5M3Q8NGP4 307 aa4.44□□□□□ -1.7
PSPC1-205ENST00000497722 CPPED1Q9BRF8 314 aaPredicted RBP4.44□□□□□ -1.7
PSPC1-205ENST00000497722 KCNH6Q9H252 994 aa4.44□□□□□ -1.7
PSPC1-205ENST00000497722 ZNF768Q9H5H4 540 aaKnown RBP4.44□□□□□ -1.7
PSPC1-205ENST00000497722 CHST2Q9Y4C5 530 aa4.44□□□□□ -1.7
PSPC1-205ENST00000497722 CDY2AQ9Y6F7 541 aa4.44□□□□□ -1.7
PSPC1-205ENST00000497722 WASHC2AQ641Q2 1341 aa4.44□□□□□ -1.7
PSPC1-205ENST00000497722 GRID2IPA4D2P6 1211 aa4.43□□□□□ -1.7
PSPC1-205ENST00000497722 ITGB1P05556 798 aa4.43□□□□□ -1.7
PSPC1-205ENST00000497722 CLEC2LP0C7M8 214 aa4.43□□□□□ -1.7
PSPC1-205ENST00000497722 CDK11BP21127 795 aaKnown RBP4.43□□□□□ -1.7
PSPC1-205ENST00000497722 GUCY2FP51841 1108 aa4.43□□□□□ -1.7
PSPC1-205ENST00000497722 FAM189BP81408 668 aa4.43□□□□□ -1.7
PSPC1-205ENST00000497722 MEF2AQ02078 507 aaPredicted RBP4.43□□□□□ -1.7
PSPC1-205ENST00000497722 LAIR1Q6GTX8 287 aa4.43□□□□□ -1.7
PSPC1-205ENST00000497722 DRICH1Q6PGQ1 229 aaPredicted RBP4.43□□□□□ -1.7
PSPC1-205ENST00000497722 LRRC55Q6ZSA7 311 aa4.43□□□□□ -1.7
PSPC1-205ENST00000497722 SYT12Q8IV01 421 aa4.43□□□□□ -1.7
PSPC1-205ENST00000497722 GLB1L2Q8IW92 636 aa4.43□□□□□ -1.7
PSPC1-205ENST00000497722 GLB1L3Q8NCI6 653 aaPredicted RBP4.43□□□□□ -1.7
PSPC1-205ENST00000497722 OR14C36Q8NHC7 312 aa4.43□□□□□ -1.7
PSPC1-205ENST00000497722 SNX33Q8WV41 574 aa4.43□□□□□ -1.7
PSPC1-205ENST00000497722 MTMR8Q96EF0 704 aa4.43□□□□□ -1.7
PSPC1-205ENST00000497722 NDC1Q9BTX1 674 aa4.43□□□□□ -1.7
PSPC1-205ENST00000497722 HOMER2Q9NSB8 354 aa4.43□□□□□ -1.7
PSPC1-205ENST00000497722 SLC5A4Q9NY91 659 aa4.43□□□□□ -1.7
PSPC1-205ENST00000497722 SORCS3Q9UPU3 1222 aa4.43□□□□□ -1.7
PSPC1-205ENST00000497722 ZMYM3Q14202 1370 aa4.42□□□□□ -1.7
PSPC1-205ENST00000497722 GOLGA8AA7E2F4 631 aa4.42□□□□□ -1.7
PSPC1-205ENST00000497722 ALG1L2C9J202 215 aa4.42□□□□□ -1.7
PSPC1-205ENST00000497722 GPR39O43194 453 aa4.42□□□□□ -1.7
PSPC1-205ENST00000497722 GYPEP15421 78 aa4.42□□□□□ -1.7
PSPC1-205ENST00000497722 XPAP23025 273 aaPredicted RBP4.42□□□□□ -1.7
PSPC1-205ENST00000497722 ADRA1BP35368 520 aa4.42□□□□□ -1.7
PSPC1-205ENST00000497722 NRG3P56975 720 aa4.42□□□□□ -1.7
PSPC1-205ENST00000497722 EVA1CP58658 441 aa4.42□□□□□ -1.7
PSPC1-205ENST00000497722 DUSP2Q05923 314 aa4.42□□□□□ -1.7
PSPC1-205ENST00000497722 MBNL2Q5VZF2 373 aaKnown RBP4.42□□□□□ -1.7
PSPC1-205ENST00000497722 METRNLQ641Q3 311 aa4.42□□□□□ -1.7
PSPC1-205ENST00000497722 CCDC62Q6P9F0 684 aa4.42□□□□□ -1.7
PSPC1-205ENST00000497722 LMBR1LQ6UX01 489 aa4.42□□□□□ -1.7
PSPC1-205ENST00000497722 VRK3Q8IV63 474 aa4.42□□□□□ -1.7
PSPC1-205ENST00000497722 AMOTL1Q8IY63 956 aa4.42□□□□□ -1.7
PSPC1-205ENST00000497722 ANKRD13AQ8IZ07 590 aa4.42□□□□□ -1.7
PSPC1-205ENST00000497722 CLRN3Q8NCR9 226 aa4.42□□□□□ -1.7
PSPC1-205ENST00000497722 CPT1CQ8TCG5 803 aa4.42□□□□□ -1.7
PSPC1-205ENST00000497722 AHCYL2Q96HN2 611 aaKnown RBP4.42□□□□□ -1.7
PSPC1-205ENST00000497722 TTPALQ9BTX7 342 aa4.42□□□□□ -1.7
PSPC1-205ENST00000497722 SLC46A2Q9BY10 475 aa4.42□□□□□ -1.7
PSPC1-205ENST00000497722 KCTD10Q9H3F6 313 aa4.42□□□□□ -1.7
PSPC1-205ENST00000497722 TOPORSQ9NS56 1045 aaPredicted RBP4.42□□□□□ -1.7
PSPC1-205ENST00000497722 TMEM191CA6NGB0 347 aa4.41□□□□□ -1.7
PSPC1-205ENST00000497722 TMEM200CA6NKL6 621 aa4.41□□□□□ -1.7
PSPC1-205ENST00000497722 LEFTY2O00292 366 aa4.41□□□□□ -1.7
PSPC1-205ENST00000497722 RAMP2O60895 175 aa4.41□□□□□ -1.7
PSPC1-205ENST00000497722 LPLP06858 475 aa4.41□□□□□ -1.7
PSPC1-205ENST00000497722 ZSCAN20P17040 1043 aaPredicted RBP4.41□□□□□ -1.7
PSPC1-205ENST00000497722 CTSSP25774 331 aa4.41□□□□□ -1.7
PSPC1-205ENST00000497722 APOBEC3AP31941 199 aaPredicted RBP4.41□□□□□ -1.7
PSPC1-205ENST00000497722 SCAND1P57086 179 aa4.41□□□□□ -1.7
PSPC1-205ENST00000497722 AMPD3Q01432 767 aa4.41□□□□□ -1.7
PSPC1-205ENST00000497722 CLUL1Q15846 466 aa4.41□□□□□ -1.7
PSPC1-205ENST00000497722 FSCN1Q16658 493 aaKnown RBP4.41□□□□□ -1.7
PSPC1-205ENST00000497722 CT83Q5H943 113 aa4.41□□□□□ -1.7
PSPC1-205ENST00000497722 ANKS6Q68DC2 871 aa4.41□□□□□ -1.7
PSPC1-205ENST00000497722 DPY19L2P1Q6NXN4 242 aa4.41□□□□□ -1.7
PSPC1-205ENST00000497722 XYLT1Q86Y38 959 aa4.41□□□□□ -1.7
PSPC1-205ENST00000497722 PRPF38AQ8NAV1 312 aaKnown RBP4.41□□□□□ -1.7
PSPC1-205ENST00000497722 COG1Q8WTW3 980 aa4.41□□□□□ -1.7
PSPC1-205ENST00000497722 ZG16BQ96DA0 208 aa4.41□□□□□ -1.7
PSPC1-205ENST00000497722 MYEOVQ96EZ4 313 aa4.41□□□□□ -1.7
PSPC1-205ENST00000497722 ORAI2Q96SN7 254 aa4.41□□□□□ -1.7
PSPC1-205ENST00000497722 SMAD5Q99717 465 aaKnown RBP4.41□□□□□ -1.7
PSPC1-205ENST00000497722 FAM126AQ9BYI3 521 aaPredicted RBP4.41□□□□□ -1.7
PSPC1-205ENST00000497722 BRINP2Q9C0B6 783 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms