RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 PGM3O95394 542 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 KITP10721 976 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 PYGMP11217 842 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 DESP17661 470 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 TAC1P20366 129 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 C10orf76Q5T2E6 689 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 SLC30A10Q6XR72 485 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 SLC20A1Q8WUM9 679 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 SCFD1Q8WVM8 642 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 HAUS1Q96CS2 278 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 TMEM47Q9BQJ4 181 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 DNAAF2Q9NVR5 837 aaKnown RBP11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 GRHL1Q9NZI5 618 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 DDX25Q9UHL0 483 aaKnown RBP11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 RIC1Q4ADV7 1423 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 FAM47DPA6NHR8 397 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 TJP3O95049 919 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 PLS3P13797 630 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 SLC16A2P36021 539 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 PGM1P36871 562 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 KCNA1Q09470 495 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 MTFR1Q15390 333 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 PPP2R5EQ16537 467 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 ECM1Q16610 540 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 RIBC1Q8N443 379 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 SYT2Q8N9I0 419 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 LNX1Q8TBB1 728 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 PIP4K2CQ8TBX8 421 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 WDR66Q8TBY9 1149 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 CRAMP1Q96RY5 1269 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 CENPKQ9BS16 269 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 SHCBP1LQ9BZQ2 653 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 TRABDQ9H4I3 376 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 FBXO6Q9NRD1 293 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 HEY2Q9UBP5 337 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 MARCOQ9UEW3 520 aaPredicted RBP11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 LRRC42Q9Y546 428 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 LRRC37A3O60309 1634 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 FMN2Q9NZ56 1722 aa11.33□□□□□ -0.6
TRAPPC12-223ENST00000497597 DNAJC6O75061 913 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 ENO1P06733 434 aaKnown RBP11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 ATP6V1B1P15313 513 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 LMNB1P20700 586 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 FUT4P22083 530 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 COILP38432 576 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 ADCY7P51828 1080 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 EPHB1P54762 984 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 PDE1CQ14123 709 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 GALNTL6Q49A17 601 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 PROM2Q8N271 834 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 VGLL2Q8N8G2 317 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 PRPF31Q8WWY3 499 aaKnown RBP11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 SYN2Q92777 582 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 TTC17Q96AE7 1141 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 RSPH10B2B2RC85 870 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 AKAP3O75969 853 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 GAS8O95995 478 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 RSPH10BP0C881 870 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 MECOMQ03112 1051 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 GRAMD1BQ3KR37 738 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 MPP4Q96JB8 637 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 PCIF1Q9H4Z3 704 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 PCDH11XQ9BZA7 1347 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 AKAP12Q02952 1782 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 H3BRJ5 948 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 TBX10O75333 385 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 TRPA1O75762 1119 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 ZCWPW2Q504Y3 356 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 ACSBG2Q5FVE4 666 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 DAB2IPQ5VWQ8 1189 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 GALNT17Q6IS24 598 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 PTF1AQ7RTS3 328 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 CADPS2Q86UW7 1296 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 FAM186BQ8IYM0 893 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 RNF168Q8IYW5 571 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 MYCT1Q8N699 235 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 SLC30A5Q8TAD4 765 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 CNKSR2Q8WXI2 1034 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 ZNF653Q96CK0 615 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 HES6Q96HZ4 224 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 MAGEB18Q96M61 343 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 RILPQ96NA2 401 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 THTPAQ9BU02 230 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 UBE2TQ9NPD8 197 aaPredicted RBP11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 KLHL11Q9NVR0 708 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 SYNGAP1Q96PV0 1343 aa11.32□□□□□ -0.6
TRAPPC12-223ENST00000497597 EXOC3O60645 756 aa11.31□□□□□ -0.6
TRAPPC12-223ENST00000497597 ATP5HO75947 161 aa11.31□□□□□ -0.6
TRAPPC12-223ENST00000497597 GJB6O95452 261 aa11.31□□□□□ -0.6
TRAPPC12-223ENST00000497597 TTLL1O95922 423 aa11.31□□□□□ -0.6
TRAPPC12-223ENST00000497597 NR3C1P04150 777 aa11.31□□□□□ -0.6
TRAPPC12-223ENST00000497597 ACADSP16219 412 aa11.31□□□□□ -0.6
TRAPPC12-223ENST00000497597 RPL13P26373 211 aaKnown RBP11.31□□□□□ -0.6
TRAPPC12-223ENST00000497597 SSTR3P32745 418 aaPredicted RBP11.31□□□□□ -0.6
TRAPPC12-223ENST00000497597 FAM182AQ5T1J6 154 aa11.31□□□□□ -0.6
TRAPPC12-223ENST00000497597 C1orf146Q5VVC0 180 aa11.31□□□□□ -0.6
TRAPPC12-223ENST00000497597 LVRNQ6Q4G3 990 aa11.31□□□□□ -0.6
TRAPPC12-223ENST00000497597 LCA5Q86VQ0 697 aa11.31□□□□□ -0.6
TRAPPC12-223ENST00000497597 RASSF3Q86WH2 238 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms