RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 FEM1BQ9UK73 627 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 FBXL21Q9UKT6 434 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 DENND2AQ9ULE3 1009 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 SLC39A10Q9ULF5 831 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 EDARQ9UNE0 448 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 STARD13Q9Y3M8 1113 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 CFAP20Q9Y6A4 193 aaKnown RBP2.2□□□□□ -2.06
UBR4-217ENST00000497018 KDM5AP29375 1690 aaKnown RBP2.2□□□□□ -2.06
UBR4-217ENST00000497018 ABCC1P33527 1531 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 MSH6P52701 1360 aa2.2□□□□□ -2.06
UBR4-217ENST00000497018 DHX57Q6P158 1386 aaKnown RBP2.2□□□□□ -2.06
UBR4-217ENST00000497018 ZC3H13Q5T200 1668 aaKnown RBP2.19□□□□□ -2.06
UBR4-217ENST00000497018 ABCC3O15438 1527 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 SHISA3A0PJX4 238 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 PRSS38A1L453 326 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 GTPBP10A4D1E9 387 aaKnown RBP2.19□□□□□ -2.06
UBR4-217ENST00000497018 CDC14CA4D256 554 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 CLCA1A8K7I4 914 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 ISM1B1AKI9 464 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 PI4K2BG5E9Z4 385 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 H7C0S8 307 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 CHL1O00533 1208 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 KCNK3O14649 394 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 DAPK3O43293 454 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 CLASP2O75122 1294 aaKnown RBP2.19□□□□□ -2.06
UBR4-217ENST00000497018 ZBED4O75132 1171 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 TMEM127O75204 238 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 LRRN2O75325 713 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 MAFO75444 373 aaPredicted RBP2.19□□□□□ -2.06
UBR4-217ENST00000497018 TOMM70O94826 608 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 TMEM63AO94886 807 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 ZNF205O95201 554 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 PGM3O95394 542 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 ADAMTS2O95450 1211 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 CYP17A1P05093 508 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 CELA3BP08861 270 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 PARP1P09874 1014 aaKnown RBP2.19□□□□□ -2.06
UBR4-217ENST00000497018 ADH5P11766 374 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 MX2P20592 715 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 MUTP22033 750 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 AOAHP28039 575 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 SDHAP31040 664 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 ATICP31939 592 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 CTNNA1P35221 906 aaKnown RBP2.19□□□□□ -2.06
UBR4-217ENST00000497018 HOXD13P35453 343 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 PLA2G5P39877 138 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 HK3P52790 923 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 COPAP53621 1224 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 SLC16A1P53985 500 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 PNLIPRP1P54315 467 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 NLRP12P59046 1061 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 FMO1Q01740 532 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 NRG1Q02297 640 aaPredicted RBP2.19□□□□□ -2.06
UBR4-217ENST00000497018 CREMQ03060 361 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 DUSP4Q13115 394 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 ADAM9Q13443 819 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 TUSC3Q13454 348 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 SCARB2Q14108 478 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 LRP8Q14114 963 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 PTK2BQ14289 1009 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 PLCL1Q15111 1095 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 CRY1Q16526 586 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 UGT8Q16880 541 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 ZMYM1Q5SVZ6 1142 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 HECTD3Q5T447 861 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 CPZQ66K79 652 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 NUGGCQ68CJ6 796 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 IQCEQ6IPM2 695 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 LETMD1Q6P1Q0 360 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 CCDC62Q6P9F0 684 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 CNKSR3Q6P9H4 555 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 CDC37L1Q7L3B6 337 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 MILR1Q7Z6M3 343 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 OSTM1Q86WC4 334 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 ZFPM1Q8IX07 1006 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 C16orf71Q8IYS4 520 aaPredicted RBP2.19□□□□□ -2.06
UBR4-217ENST00000497018 CELF5Q8N6W0 485 aaKnown RBP2.19□□□□□ -2.06
UBR4-217ENST00000497018 GOLGA6L1Q8N7Z2 621 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 PPM1NQ8N819 430 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 TSPYL6Q8N831 410 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 MFSD2AQ8NA29 543 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 DTWD2Q8NBA8 298 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 OR2I1PQ8NGU4 316 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 TDRD7Q8NHU6 1098 aaKnown RBP2.19□□□□□ -2.06
UBR4-217ENST00000497018 ADAMTS15Q8TE58 950 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 UBASH3BQ8TF42 649 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 NRG4Q8WWG1 115 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 MAML1Q92585 1016 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 KAT5Q92993 513 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 NSUN4Q96CB9 384 aaKnown RBP2.19□□□□□ -2.06
UBR4-217ENST00000497018 RRP36Q96EU6 259 aaKnown RBP2.19□□□□□ -2.06
UBR4-217ENST00000497018 LTV1Q96GA3 475 aaPredicted RBP2.19□□□□□ -2.06
UBR4-217ENST00000497018 MRGPRX1Q96LB2 322 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 Q96M66 194 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 SAMD11Q96NU1 681 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 PSMG3-AS1Q96PY0 264 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 FMNL2Q96PY5 1086 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 DMRTA2Q96SC8 542 aa2.19□□□□□ -2.06
UBR4-217ENST00000497018 PYM1Q9BRP8 204 aaKnown RBP2.19□□□□□ -2.06
UBR4-217ENST00000497018 SYT17Q9BSW7 474 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms