RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 MYH11P35749 1972 aa17.98■□□□□ 0.47
SF3A1-209ENST00000496189 FSD2A1L4K1 749 aa17.97■□□□□ 0.47
SF3A1-209ENST00000496189 MEIS3P2A8K0S8 358 aa17.97■□□□□ 0.47
SF3A1-209ENST00000496189 TRAK2O60296 914 aa17.97■□□□□ 0.47
SF3A1-209ENST00000496189 POMCP01189 267 aa17.97■□□□□ 0.47
SF3A1-209ENST00000496189 PLCB3Q01970 1234 aa17.97■□□□□ 0.47
SF3A1-209ENST00000496189 GIT2Q14161 759 aa17.97■□□□□ 0.47
SF3A1-209ENST00000496189 ZNF568Q3ZCX4 644 aa17.97■□□□□ 0.47
SF3A1-209ENST00000496189 ADALQ6DHV7 355 aa17.97■□□□□ 0.47
SF3A1-209ENST00000496189 HAUS6Q7Z4H7 955 aa17.97■□□□□ 0.47
SF3A1-209ENST00000496189 FAM178BQ8IXR5 827 aa17.97■□□□□ 0.47
SF3A1-209ENST00000496189 IQUBQ8NA54 791 aa17.97■□□□□ 0.47
SF3A1-209ENST00000496189 TMEM87AQ8NBN3 555 aa17.97■□□□□ 0.47
SF3A1-209ENST00000496189 TMEM161BQ8NDZ6 487 aa17.97■□□□□ 0.47
SF3A1-209ENST00000496189 HLA-CQ95604 372 aa17.97■□□□□ 0.47
SF3A1-209ENST00000496189 GAD1Q99259 594 aa17.97■□□□□ 0.47
SF3A1-209ENST00000496189 ENTPD7Q9NQZ7 604 aa17.97■□□□□ 0.47
SF3A1-209ENST00000496189 TOPORSQ9NS56 1045 aaPredicted RBP17.97■□□□□ 0.47
SF3A1-209ENST00000496189 HCSTQ9UBK5 93 aa17.97■□□□□ 0.47
SF3A1-209ENST00000496189 GOLGA6L4A6NEF3 574 aa17.96■□□□□ 0.47
SF3A1-209ENST00000496189 ALDH2P05091 517 aa17.96■□□□□ 0.47
SF3A1-209ENST00000496189 AKAP5P24588 427 aa17.96■□□□□ 0.47
SF3A1-209ENST00000496189 CA8P35219 290 aa17.96■□□□□ 0.47
SF3A1-209ENST00000496189 NCKAP1LP55160 1127 aa17.96■□□□□ 0.47
SF3A1-209ENST00000496189 RESP18Q5W5W9 173 aa17.96■□□□□ 0.47
SF3A1-209ENST00000496189 SHC4Q6S5L8 630 aa17.96■□□□□ 0.47
SF3A1-209ENST00000496189 EP400NLQ6ZTU2 488 aa17.96■□□□□ 0.47
SF3A1-209ENST00000496189 DYMQ7RTS9 669 aa17.96■□□□□ 0.47
SF3A1-209ENST00000496189 ATXN2LQ8WWM7 1075 aaKnown RBP17.96■□□□□ 0.47
SF3A1-209ENST00000496189 DDX12PQ92771 950 aa17.96■□□□□ 0.47
SF3A1-209ENST00000496189 ACO2Q99798 780 aaKnown RBP17.96■□□□□ 0.47
SF3A1-209ENST00000496189 TMEM175Q9BSA9 504 aa17.96■□□□□ 0.47
SF3A1-209ENST00000496189 CCDC94Q9BW85 323 aaPredicted RBP17.96■□□□□ 0.47
SF3A1-209ENST00000496189 NRDE2Q9H7Z3 1164 aa17.96■□□□□ 0.47
SF3A1-209ENST00000496189 SEL1LQ9UBV2 794 aa17.96■□□□□ 0.47
SF3A1-209ENST00000496189 FAN1Q9Y2M0 1017 aa17.96■□□□□ 0.47
SF3A1-209ENST00000496189 PRRC2BQ5JSZ5 2229 aaKnown RBP17.95■□□□□ 0.46
SF3A1-209ENST00000496189 COL6A3P12111 3177 aa17.95■□□□□ 0.46
SF3A1-209ENST00000496189 MAPTP10636 758 aaKnown RBP17.95■□□□□ 0.46
SF3A1-209ENST00000496189 IDEP14735 1019 aa17.95■□□□□ 0.46
SF3A1-209ENST00000496189 GAP43P17677 238 aa17.95■□□□□ 0.46
SF3A1-209ENST00000496189 CMA1P23946 247 aa17.95■□□□□ 0.46
SF3A1-209ENST00000496189 PBX3P40426 434 aa17.95■□□□□ 0.46
SF3A1-209ENST00000496189 LIG4P49917 911 aa17.95■□□□□ 0.46
SF3A1-209ENST00000496189 SCNN1GP51170 649 aa17.95■□□□□ 0.46
SF3A1-209ENST00000496189 ZNF131P52739 623 aa17.95■□□□□ 0.46
SF3A1-209ENST00000496189 MRPS5P82675 430 aaKnown RBP17.95■□□□□ 0.46
SF3A1-209ENST00000496189 GRIK3Q13003 919 aa17.95■□□□□ 0.46
SF3A1-209ENST00000496189 TCEAL5Q5H9L2 206 aa17.95■□□□□ 0.46
SF3A1-209ENST00000496189 NT5DC1Q5TFE4 455 aa17.95■□□□□ 0.46
SF3A1-209ENST00000496189 MPZL3Q6UWV2 235 aa17.95■□□□□ 0.46
SF3A1-209ENST00000496189 TMC7Q7Z402 723 aa17.95■□□□□ 0.46
SF3A1-209ENST00000496189 SLC39A11Q8N1S5 342 aa17.95■□□□□ 0.46
SF3A1-209ENST00000496189 TARS2Q9BW92 718 aaKnown RBP17.95■□□□□ 0.46
SF3A1-209ENST00000496189 RNF39Q9H2S5 420 aa17.95■□□□□ 0.46
SF3A1-209ENST00000496189 TNMDQ9H2S6 317 aa17.95■□□□□ 0.46
SF3A1-209ENST00000496189 MAGEF1Q9HAY2 307 aa17.95■□□□□ 0.46
SF3A1-209ENST00000496189 NGRNQ9NPE2 291 aaKnown RBP17.95■□□□□ 0.46
SF3A1-209ENST00000496189 SNTG2Q9NY99 539 aa17.95■□□□□ 0.46
SF3A1-209ENST00000496189 ANKFY1Q9P2R3 1169 aa17.95■□□□□ 0.46
SF3A1-209ENST00000496189 GDAQ9Y2T3 454 aa17.95■□□□□ 0.46
SF3A1-209ENST00000496189 TTLL13PA6NNM8 815 aa17.94■□□□□ 0.46
SF3A1-209ENST00000496189 NT5C1B-RDH14C9J2C7 533 aa17.94■□□□□ 0.46
SF3A1-209ENST00000496189 HNRNPDLO14979 420 aaKnown RBP17.94■□□□□ 0.46
SF3A1-209ENST00000496189 INPPL1O15357 1258 aa17.94■□□□□ 0.46
SF3A1-209ENST00000496189 CLDN3O15551 220 aa17.94■□□□□ 0.46
SF3A1-209ENST00000496189 TOM1L1O75674 476 aa17.94■□□□□ 0.46
SF3A1-209ENST00000496189 SRGAP2BP0DMP2 458 aa17.94■□□□□ 0.46
SF3A1-209ENST00000496189 MCF2P10911 925 aa17.94■□□□□ 0.46
SF3A1-209ENST00000496189 OR1G1P47890 313 aa17.94■□□□□ 0.46
SF3A1-209ENST00000496189 EEF1DP3Q658K8 133 aa17.94■□□□□ 0.46
SF3A1-209ENST00000496189 ZPBP2Q6X784 338 aa17.94■□□□□ 0.46
SF3A1-209ENST00000496189 ZBTB33Q86T24 672 aa17.94■□□□□ 0.46
SF3A1-209ENST00000496189 ZNF280BQ86YH2 543 aa17.94■□□□□ 0.46
SF3A1-209ENST00000496189 CCDC65Q8IXS2 484 aa17.94■□□□□ 0.46
SF3A1-209ENST00000496189 DHX58Q96C10 678 aa17.94■□□□□ 0.46
SF3A1-209ENST00000496189 CHAMP1Q96JM3 812 aa17.94■□□□□ 0.46
SF3A1-209ENST00000496189 ZFP42Q96MM3 310 aa17.94■□□□□ 0.46
SF3A1-209ENST00000496189 TCF25Q9BQ70 676 aa17.94■□□□□ 0.46
SF3A1-209ENST00000496189 KLK14Q9P0G3 267 aa17.94■□□□□ 0.46
SF3A1-209ENST00000496189 USP20Q9Y2K6 914 aa17.94■□□□□ 0.46
SF3A1-209ENST00000496189 A0A1W2PQ27 194 aa17.93■□□□□ 0.46
SF3A1-209ENST00000496189 A0A1W2PQ64 194 aa17.93■□□□□ 0.46
SF3A1-209ENST00000496189 A0A1W2PQD8 194 aa17.93■□□□□ 0.46
SF3A1-209ENST00000496189 RECQL4O94761 1208 aa17.93■□□□□ 0.46
SF3A1-209ENST00000496189 THP07101 528 aa17.93■□□□□ 0.46
SF3A1-209ENST00000496189 GALTP07902 379 aa17.93■□□□□ 0.46
SF3A1-209ENST00000496189 HARSP12081 509 aaKnown RBP17.93■□□□□ 0.46
SF3A1-209ENST00000496189 SLC11A1P49279 550 aa17.93■□□□□ 0.46
SF3A1-209ENST00000496189 SMC1AQ14683 1233 aaKnown RBP17.93■□□□□ 0.46
SF3A1-209ENST00000496189 NOLC1Q14978 699 aaKnown RBP eCLIP17.93■□□□□ 0.46
SF3A1-209ENST00000496189 KYAT1Q16773 422 aa17.93■□□□□ 0.46
SF3A1-209ENST00000496189 STXBP4Q6ZWJ1 553 aa17.93■□□□□ 0.46
SF3A1-209ENST00000496189 CEP57L1Q8IYX8 460 aa17.93■□□□□ 0.46
SF3A1-209ENST00000496189 LRRC15Q8TF66 581 aa17.93■□□□□ 0.46
SF3A1-209ENST00000496189 IGSF21Q96ID5 467 aa17.93■□□□□ 0.46
SF3A1-209ENST00000496189 COLEC11Q9BWP8 271 aa17.93■□□□□ 0.46
SF3A1-209ENST00000496189 IGFLR1Q9H665 355 aa17.93■□□□□ 0.46
SF3A1-209ENST00000496189 MRPL44Q9H9J2 332 aaKnown RBP17.93■□□□□ 0.46
SF3A1-209ENST00000496189 GDPD2Q9HCC8 539 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms