RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 ZFP42Q96MM3 310 aa14.08□□□□□ -0.16
PTPRF-214ENST00000496043 NECTIN4Q96NY8 510 aa14.08□□□□□ -0.16
PTPRF-214ENST00000496043 KLHL5Q96PQ7 755 aa14.08□□□□□ -0.16
PTPRF-214ENST00000496043 VN1R3Q9BXE9 311 aa14.08□□□□□ -0.16
PTPRF-214ENST00000496043 NXF3Q9H4D5 531 aaKnown RBP14.08□□□□□ -0.16
PTPRF-214ENST00000496043 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.08□□□□□ -0.16
PTPRF-214ENST00000496043 DDX19AQ9NUU7 478 aaKnown RBP14.08□□□□□ -0.16
PTPRF-214ENST00000496043 DZANK1Q9NVP4 752 aa14.08□□□□□ -0.16
PTPRF-214ENST00000496043 PRG3Q9Y2Y8 225 aaPredicted RBP14.08□□□□□ -0.16
PTPRF-214ENST00000496043 LILRB3O75022 631 aa14.07□□□□□ -0.16
PTPRF-214ENST00000496043 PRKCBP05771 671 aa14.07□□□□□ -0.16
PTPRF-214ENST00000496043 EPCAMP16422 314 aa14.07□□□□□ -0.16
PTPRF-214ENST00000496043 LIG1P18858 919 aa14.07□□□□□ -0.16
PTPRF-214ENST00000496043 MTHFRP42898 656 aa14.07□□□□□ -0.16
PTPRF-214ENST00000496043 EFNA5P52803 228 aa14.07□□□□□ -0.16
PTPRF-214ENST00000496043 TAS1R1Q7RTX1 841 aa14.07□□□□□ -0.16
PTPRF-214ENST00000496043 CABP7Q86V35 215 aa14.07□□□□□ -0.16
PTPRF-214ENST00000496043 BSNDQ8WZ55 320 aa14.07□□□□□ -0.16
PTPRF-214ENST00000496043 RPS6KC1Q96S38 1066 aa14.07□□□□□ -0.16
PTPRF-214ENST00000496043 ADPGKQ9BRR6 497 aa14.07□□□□□ -0.16
PTPRF-214ENST00000496043 POLD4Q9HCU8 107 aa14.07□□□□□ -0.16
PTPRF-214ENST00000496043 KLK14Q9P0G3 267 aa14.07□□□□□ -0.16
PTPRF-214ENST00000496043 SMC3Q9UQE7 1217 aa14.07□□□□□ -0.16
PTPRF-214ENST00000496043 NR2E1Q9Y466 385 aa14.07□□□□□ -0.16
PTPRF-214ENST00000496043 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.07□□□□□ -0.16
PTPRF-214ENST00000496043 E9PMD0 336 aa14.06□□□□□ -0.16
PTPRF-214ENST00000496043 K7ERI5 159 aa14.06□□□□□ -0.16
PTPRF-214ENST00000496043 URODP06132 367 aa14.06□□□□□ -0.16
PTPRF-214ENST00000496043 CNPP09543 421 aaKnown RBP14.06□□□□□ -0.16
PTPRF-214ENST00000496043 GRIK3Q13003 919 aa14.06□□□□□ -0.16
PTPRF-214ENST00000496043 IL17AQ16552 155 aa14.06□□□□□ -0.16
PTPRF-214ENST00000496043 RARS2Q5T160 578 aaKnown RBP14.06□□□□□ -0.16
PTPRF-214ENST00000496043 KIAA1841Q6NSI8 718 aa14.06□□□□□ -0.16
PTPRF-214ENST00000496043 C12orf76Q8N812 135 aaPredicted RBP14.06□□□□□ -0.16
PTPRF-214ENST00000496043 GSTCDQ8NEC7 633 aa14.06□□□□□ -0.16
PTPRF-214ENST00000496043 HERC2P3Q9BVR0 1158 aa14.06□□□□□ -0.16
PTPRF-214ENST00000496043 PDZD7Q9H5P4 517 aa14.06□□□□□ -0.16
PTPRF-214ENST00000496043 SPDYE4A6NLX3 237 aa14.05□□□□□ -0.16
PTPRF-214ENST00000496043 TTLL13PA6NNM8 815 aa14.05□□□□□ -0.16
PTPRF-214ENST00000496043 C2CD2LO14523 706 aa14.05□□□□□ -0.16
PTPRF-214ENST00000496043 TADA2AO75478 443 aa14.05□□□□□ -0.16
PTPRF-214ENST00000496043 CD2BP2O95400 341 aaKnown RBP14.05□□□□□ -0.16
PTPRF-214ENST00000496043 CDC25AP30304 524 aa14.05□□□□□ -0.16
PTPRF-214ENST00000496043 ZXDAP98168 799 aa14.05□□□□□ -0.16
PTPRF-214ENST00000496043 KIAA0319Q5VV43 1072 aa14.05□□□□□ -0.16
PTPRF-214ENST00000496043 LARP1BQ659C4 914 aaKnown RBP14.05□□□□□ -0.16
PTPRF-214ENST00000496043 APBB1IPQ7Z5R6 666 aaPredicted RBP14.05□□□□□ -0.16
PTPRF-214ENST00000496043 KCTD17Q8N5Z5 321 aa14.05□□□□□ -0.16
PTPRF-214ENST00000496043 FAM122AQ96E09 287 aa14.05□□□□□ -0.16
PTPRF-214ENST00000496043 MFSD14AQ96MC6 490 aa14.05□□□□□ -0.16
PTPRF-214ENST00000496043 FBXL18Q96ME1 805 aa14.05□□□□□ -0.16
PTPRF-214ENST00000496043 TBC1D32Q96NH3 1257 aa14.05□□□□□ -0.16
PTPRF-214ENST00000496043 CCDC113Q9H0I3 377 aa14.05□□□□□ -0.16
PTPRF-214ENST00000496043 MARCH5Q9NX47 278 aa14.05□□□□□ -0.16
PTPRF-214ENST00000496043 SNTG2Q9NY99 539 aa14.05□□□□□ -0.16
PTPRF-214ENST00000496043 DPP7Q9UHL4 492 aa14.05□□□□□ -0.16
PTPRF-214ENST00000496043 KCNG1Q9UIX4 513 aa14.05□□□□□ -0.16
PTPRF-214ENST00000496043 ZMYM2Q9UBW7 1377 aa14.05□□□□□ -0.16
PTPRF-214ENST00000496043 ARID2Q68CP9 1835 aa14.04□□□□□ -0.16
PTPRF-214ENST00000496043 CCDC169A6NNP5 214 aa14.04□□□□□ -0.16
PTPRF-214ENST00000496043 PP2D1A8MPX8 630 aa14.04□□□□□ -0.16
PTPRF-214ENST00000496043 EFEMP2O95967 443 aa14.04□□□□□ -0.16
PTPRF-214ENST00000496043 THP07101 528 aa14.04□□□□□ -0.16
PTPRF-214ENST00000496043 GLUD2P49448 558 aa14.04□□□□□ -0.16
PTPRF-214ENST00000496043 CLCN4P51793 760 aa14.04□□□□□ -0.16
PTPRF-214ENST00000496043 ATP2C1P98194 919 aaPredicted RBP14.04□□□□□ -0.16
PTPRF-214ENST00000496043 DSG1Q02413 1049 aa14.04□□□□□ -0.16
PTPRF-214ENST00000496043 ZRSR1Q15695 479 aaKnown RBP14.04□□□□□ -0.16
PTPRF-214ENST00000496043 USP41Q3LFD5 358 aa14.04□□□□□ -0.16
PTPRF-214ENST00000496043 RINT1Q6NUQ1 792 aa14.04□□□□□ -0.16
PTPRF-214ENST00000496043 KANK3Q6NY19 840 aa14.04□□□□□ -0.16
PTPRF-214ENST00000496043 ELMSAN1Q6PJG2 1045 aa14.04□□□□□ -0.16
PTPRF-214ENST00000496043 TRIM67Q6ZTA4 783 aa14.04□□□□□ -0.16
PTPRF-214ENST00000496043 GPR65Q8IYL9 337 aa14.04□□□□□ -0.16
PTPRF-214ENST00000496043 MMTAG2Q9BU76 263 aaKnown RBP14.04□□□□□ -0.16
PTPRF-214ENST00000496043 POMKQ9H5K3 350 aa14.04□□□□□ -0.16
PTPRF-214ENST00000496043 RXFP1Q9HBX9 757 aa14.04□□□□□ -0.16
PTPRF-214ENST00000496043 TSHZ2Q9NRE2 1034 aa14.04□□□□□ -0.16
PTPRF-214ENST00000496043 CHST7Q9NS84 486 aa14.04□□□□□ -0.16
PTPRF-214ENST00000496043 USP20Q9Y2K6 914 aa14.04□□□□□ -0.16
PTPRF-214ENST00000496043 RBM19Q9Y4C8 960 aaKnown RBP14.04□□□□□ -0.16
PTPRF-214ENST00000496043 HIP1RO75146 1068 aa14.03□□□□□ -0.16
PTPRF-214ENST00000496043 ADH1AP07327 375 aa14.03□□□□□ -0.16
PTPRF-214ENST00000496043 WEE2P0C1S8 567 aa14.03□□□□□ -0.16
PTPRF-214ENST00000496043 PEX3P56589 373 aa14.03□□□□□ -0.16
PTPRF-214ENST00000496043 TUSC3Q13454 348 aa14.03□□□□□ -0.16
PTPRF-214ENST00000496043 DCAF4L1Q3SXM0 396 aa14.03□□□□□ -0.16
PTPRF-214ENST00000496043 NT5DC1Q5TFE4 455 aa14.03□□□□□ -0.16
PTPRF-214ENST00000496043 ATF7IP2Q5U623 682 aa14.03□□□□□ -0.16
PTPRF-214ENST00000496043 EEF1DP3Q658K8 133 aa14.03□□□□□ -0.16
PTPRF-214ENST00000496043 ARL6IP4Q66PJ3 421 aaKnown RBP14.03□□□□□ -0.16
PTPRF-214ENST00000496043 FUT10Q6P4F1 479 aa14.03□□□□□ -0.16
PTPRF-214ENST00000496043 TMC5Q6UXY8 1006 aa14.03□□□□□ -0.16
PTPRF-214ENST00000496043 C1orf186Q6ZWK4 172 aa14.03□□□□□ -0.16
PTPRF-214ENST00000496043 BMP8AQ7Z5Y6 402 aa14.03□□□□□ -0.16
PTPRF-214ENST00000496043 ZBTB33Q86T24 672 aa14.03□□□□□ -0.16
PTPRF-214ENST00000496043 RNF168Q8IYW5 571 aaPredicted RBP14.03□□□□□ -0.16
PTPRF-214ENST00000496043 DRC1Q96MC2 740 aa14.03□□□□□ -0.16
PTPRF-214ENST00000496043 KIFC3Q9BVG8 833 aa14.03□□□□□ -0.16
PTPRF-214ENST00000496043 TIPINQ9BVW5 301 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms