RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 F8W810 466 aa24.5■■□□□ 1.51
HDDC3-203ENST00000494993 TEX28O15482 410 aa24.5■■□□□ 1.51
HDDC3-203ENST00000494993 NR1I2O75469 434 aa24.5■■□□□ 1.51
HDDC3-203ENST00000494993 SLC27A1Q6PCB7 646 aa24.5■■□□□ 1.51
HDDC3-203ENST00000494993 CMASQ8NFW8 434 aaPredicted RBP24.5■■□□□ 1.51
HDDC3-203ENST00000494993 COLEC11Q9BWP8 271 aa24.5■■□□□ 1.51
HDDC3-203ENST00000494993 TMEM60Q9H2L4 133 aa24.5■■□□□ 1.51
HDDC3-203ENST00000494993 RXFP1Q9HBX9 757 aa24.5■■□□□ 1.51
HDDC3-203ENST00000494993 TRIP11Q15643 1979 aa24.49■■□□□ 1.51
HDDC3-203ENST00000494993 NPTXRO95502 500 aa24.49■■□□□ 1.51
HDDC3-203ENST00000494993 SPATA31C1P0DKV0 1188 aa24.49■■□□□ 1.51
HDDC3-203ENST00000494993 AKAP5P24588 427 aa24.49■■□□□ 1.51
HDDC3-203ENST00000494993 NEK4P51957 841 aa24.49■■□□□ 1.51
HDDC3-203ENST00000494993 DSG1Q02413 1049 aa24.49■■□□□ 1.51
HDDC3-203ENST00000494993 CDR2LQ86X02 465 aaPredicted RBP24.49■■□□□ 1.51
HDDC3-203ENST00000494993 GSTCDQ8NEC7 633 aa24.49■■□□□ 1.51
HDDC3-203ENST00000494993 DPP7Q9UHL4 492 aa24.49■■□□□ 1.51
HDDC3-203ENST00000494993 ZMYM2Q9UBW7 1377 aa24.49■■□□□ 1.51
HDDC3-203ENST00000494993 A0A1B0GUA9 196 aa24.48■■□□□ 1.51
HDDC3-203ENST00000494993 GALR2O43603 387 aaPredicted RBP24.48■■□□□ 1.51
HDDC3-203ENST00000494993 GLUD1P00367 558 aa24.48■■□□□ 1.51
HDDC3-203ENST00000494993 ST3GAL1Q11201 340 aa24.48■■□□□ 1.51
HDDC3-203ENST00000494993 ELMSAN1Q6PJG2 1045 aa24.48■■□□□ 1.51
HDDC3-203ENST00000494993 TMEM105Q8N8V8 129 aa24.48■■□□□ 1.51
HDDC3-203ENST00000494993 TUFT1Q9NNX1 390 aa24.48■■□□□ 1.51
HDDC3-203ENST00000494993 GPRC5CQ9NQ84 441 aa24.48■■□□□ 1.51
HDDC3-203ENST00000494993 CHST7Q9NS84 486 aa24.48■■□□□ 1.51
HDDC3-203ENST00000494993 DOCK6Q96HP0 2047 aa24.47■■□□□ 1.51
HDDC3-203ENST00000494993 LRRIQ4A6NIV6 560 aa24.47■■□□□ 1.51
HDDC3-203ENST00000494993 MCM7P33993 719 aa24.47■■□□□ 1.51
HDDC3-203ENST00000494993 GRIK3Q13003 919 aa24.47■■□□□ 1.51
HDDC3-203ENST00000494993 FUT10Q6P4F1 479 aa24.47■■□□□ 1.51
HDDC3-203ENST00000494993 PPP4R3CPQ6ZMV5 832 aa24.47■■□□□ 1.51
HDDC3-203ENST00000494993 MAEAQ7L5Y9 396 aa24.47■■□□□ 1.51
HDDC3-203ENST00000494993 CATSPER3Q86XQ3 398 aa24.47■■□□□ 1.51
HDDC3-203ENST00000494993 MCPH1Q8NEM0 835 aa24.47■■□□□ 1.51
HDDC3-203ENST00000494993 ATOH1Q92858 354 aaPredicted RBP24.47■■□□□ 1.51
HDDC3-203ENST00000494993 PRIMPOLQ96LW4 560 aa24.47■■□□□ 1.51
HDDC3-203ENST00000494993 RHOBTB2Q9BYZ6 727 aa24.47■■□□□ 1.51
HDDC3-203ENST00000494993 PRMT7Q9NVM4 692 aaPredicted RBP24.47■■□□□ 1.51
HDDC3-203ENST00000494993 CCDC195A0A1B0GUA6 201 aa24.46■■□□□ 1.51
HDDC3-203ENST00000494993 H0Y858 1186 aa24.46■■□□□ 1.51
HDDC3-203ENST00000494993 MED24O75448 989 aa24.46■■□□□ 1.51
HDDC3-203ENST00000494993 ATP2B1P20020 1258 aa24.46■■□□□ 1.51
HDDC3-203ENST00000494993 TDGQ13569 410 aa24.46■■□□□ 1.51
HDDC3-203ENST00000494993 CDCA2Q69YH5 1023 aaPredicted RBP24.46■■□□□ 1.51
HDDC3-203ENST00000494993 ASTLQ6HA08 431 aaPredicted RBP24.46■■□□□ 1.51
HDDC3-203ENST00000494993 CYP26C1Q6V0L0 522 aa24.46■■□□□ 1.51
HDDC3-203ENST00000494993 GPR62Q9BZJ7 368 aa24.46■■□□□ 1.51
HDDC3-203ENST00000494993 MFSD1Q9H3U5 465 aa24.46■■□□□ 1.51
HDDC3-203ENST00000494993 PPP4R2Q9NY27 417 aa24.46■■□□□ 1.51
HDDC3-203ENST00000494993 KLK14Q9P0G3 267 aa24.46■■□□□ 1.51
HDDC3-203ENST00000494993 PARP2Q9UGN5 583 aa24.46■■□□□ 1.51
HDDC3-203ENST00000494993 ADAM28Q9UKQ2 775 aa24.46■■□□□ 1.51
HDDC3-203ENST00000494993 VWA8A3KMH1 1905 aa24.45■■□□□ 1.51
HDDC3-203ENST00000494993 SAFBQ15424 915 aaKnown RBP eCLIP24.45■■□□□ 1.5
HDDC3-203ENST00000494993 USP41Q3LFD5 358 aa24.45■■□□□ 1.5
HDDC3-203ENST00000494993 HDAC7Q8WUI4 952 aa24.45■■□□□ 1.5
HDDC3-203ENST00000494993 B3GALT6Q96L58 329 aa24.45■■□□□ 1.5
HDDC3-203ENST00000494993 POLR3CQ9BUI4 534 aaPredicted RBP24.45■■□□□ 1.5
HDDC3-203ENST00000494993 KCNK12Q9HB15 430 aa24.45■■□□□ 1.5
HDDC3-203ENST00000494993 WDR6Q9NNW5 1121 aaKnown RBP24.45■■□□□ 1.5
HDDC3-203ENST00000494993 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.45■■□□□ 1.5
HDDC3-203ENST00000494993 CLUHO75153 1309 aa24.44■■□□□ 1.5
HDDC3-203ENST00000494993 N4BP1O75113 896 aaKnown RBP24.44■■□□□ 1.5
HDDC3-203ENST00000494993 C1RP00736 705 aa24.44■■□□□ 1.5
HDDC3-203ENST00000494993 MYBP10242 640 aa24.44■■□□□ 1.5
HDDC3-203ENST00000494993 GUCY1B3Q02153 619 aa24.44■■□□□ 1.5
HDDC3-203ENST00000494993 FAM187BQ17R55 369 aa24.44■■□□□ 1.5
HDDC3-203ENST00000494993 ZBTB8OSQ8IWT0 167 aa24.44■■□□□ 1.5
HDDC3-203ENST00000494993 GPR65Q8IYL9 337 aa24.44■■□□□ 1.5
HDDC3-203ENST00000494993 NACC1Q96RE7 527 aa24.44■■□□□ 1.5
HDDC3-203ENST00000494993 FZD8Q9H461 694 aa24.44■■□□□ 1.5
HDDC3-203ENST00000494993 FNIP2Q9P278 1114 aa24.44■■□□□ 1.5
HDDC3-203ENST00000494993 DUSP12Q9UNI6 340 aa24.44■■□□□ 1.5
HDDC3-203ENST00000494993 EIF5BO60841 1220 aaKnown RBP24.43■■□□□ 1.5
HDDC3-203ENST00000494993 RFPL2O75678 378 aa24.43■■□□□ 1.5
HDDC3-203ENST00000494993 CLCN5P51795 746 aa24.43■■□□□ 1.5
HDDC3-203ENST00000494993 POTEGQ6S5H5 508 aa24.43■■□□□ 1.5
HDDC3-203ENST00000494993 PALB2Q86YC2 1186 aa24.43■■□□□ 1.5
HDDC3-203ENST00000494993 SMG7Q92540 1137 aaKnown RBP24.43■■□□□ 1.5
HDDC3-203ENST00000494993 RABGGTAQ92696 567 aa24.43■■□□□ 1.5
HDDC3-203ENST00000494993 STAMQ92783 540 aa24.43■■□□□ 1.5
HDDC3-203ENST00000494993 PLEKHA4Q9H4M7 779 aa24.43■■□□□ 1.5
HDDC3-203ENST00000494993 IGSF9Q9P2J2 1179 aa24.43■■□□□ 1.5
HDDC3-203ENST00000494993 MYO15AQ9UKN7 3530 aa24.43■■□□□ 1.5
HDDC3-203ENST00000494993 ZFHX2Q9C0A1 2572 aaPredicted RBP24.43■■□□□ 1.5
HDDC3-203ENST00000494993 ST18O60284 1047 aa24.42■■□□□ 1.5
HDDC3-203ENST00000494993 GFRA3O60609 400 aa24.42■■□□□ 1.5
HDDC3-203ENST00000494993 PAPLNO95428 1278 aa24.42■■□□□ 1.5
HDDC3-203ENST00000494993 SPATA31D3P0C874 917 aa24.42■■□□□ 1.5
HDDC3-203ENST00000494993 RPA1P27694 616 aa24.42■■□□□ 1.5
HDDC3-203ENST00000494993 GBP2P32456 591 aaPredicted RBP24.42■■□□□ 1.5
HDDC3-203ENST00000494993 CWF19L1Q69YN2 538 aaKnown RBP24.42■■□□□ 1.5
HDDC3-203ENST00000494993 SPATA31D4Q6ZUB0 917 aa24.42■■□□□ 1.5
HDDC3-203ENST00000494993 GLYCTKQ8IVS8 523 aa24.42■■□□□ 1.5
HDDC3-203ENST00000494993 ERMNQ8TAM6 284 aa24.42■■□□□ 1.5
HDDC3-203ENST00000494993 RIN2Q8WYP3 895 aaPredicted RBP24.42■■□□□ 1.5
HDDC3-203ENST00000494993 ZNF707Q96C28 371 aaPredicted RBP24.42■■□□□ 1.5
HDDC3-203ENST00000494993 C2orf40Q9H1Z8 148 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms