RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 TEX28O15482 410 aa25.77■■□□□ 1.72
COL27A1-208ENST00000494780 B4GALT5O43286 388 aa25.77■■□□□ 1.72
COL27A1-208ENST00000494780 USO1O60763 962 aaKnown RBP25.77■■□□□ 1.72
COL27A1-208ENST00000494780 DSG1Q02413 1049 aa25.77■■□□□ 1.72
COL27A1-208ENST00000494780 CYP26C1Q6V0L0 522 aa25.77■■□□□ 1.72
COL27A1-208ENST00000494780 TUFT1Q9NNX1 390 aa25.77■■□□□ 1.72
COL27A1-208ENST00000494780 MAN1C1Q9NR34 630 aa25.77■■□□□ 1.72
COL27A1-208ENST00000494780 SPATA31C1P0DKV0 1188 aa25.76■■□□□ 1.71
COL27A1-208ENST00000494780 GSTCDQ8NEC7 633 aa25.76■■□□□ 1.71
COL27A1-208ENST00000494780 MCPH1Q8NEM0 835 aa25.76■■□□□ 1.71
COL27A1-208ENST00000494780 RHOBTB2Q9BYZ6 727 aa25.76■■□□□ 1.71
COL27A1-208ENST00000494780 TMEM60Q9H2L4 133 aa25.76■■□□□ 1.71
COL27A1-208ENST00000494780 CHST7Q9NS84 486 aa25.76■■□□□ 1.71
COL27A1-208ENST00000494780 CACNA1HO95180 2353 aa25.75■■□□□ 1.71
COL27A1-208ENST00000494780 TDRD15B5MCY1 1934 aaKnown RBP25.75■■□□□ 1.71
COL27A1-208ENST00000494780 A0A087WWV3 80 aa25.75■■□□□ 1.71
COL27A1-208ENST00000494780 NPTXRO95502 500 aa25.75■■□□□ 1.71
COL27A1-208ENST00000494780 GLUD1P00367 558 aa25.75■■□□□ 1.71
COL27A1-208ENST00000494780 C1RP00736 705 aa25.75■■□□□ 1.71
COL27A1-208ENST00000494780 AKAP5P24588 427 aa25.75■■□□□ 1.71
COL27A1-208ENST00000494780 MCM7P33993 719 aa25.75■■□□□ 1.71
COL27A1-208ENST00000494780 GRIK3Q13003 919 aa25.75■■□□□ 1.71
COL27A1-208ENST00000494780 SAFBQ15424 915 aaKnown RBP eCLIP25.75■■□□□ 1.71
COL27A1-208ENST00000494780 PPP4R3CPQ6ZMV5 832 aa25.75■■□□□ 1.71
COL27A1-208ENST00000494780 CATSPER3Q86XQ3 398 aa25.75■■□□□ 1.71
COL27A1-208ENST00000494780 GPR65Q8IYL9 337 aa25.75■■□□□ 1.71
COL27A1-208ENST00000494780 HDAC7Q8WUI4 952 aa25.75■■□□□ 1.71
COL27A1-208ENST00000494780 PRIMPOLQ96LW4 560 aa25.75■■□□□ 1.71
COL27A1-208ENST00000494780 PRMT7Q9NVM4 692 aaPredicted RBP25.75■■□□□ 1.71
COL27A1-208ENST00000494780 LRRIQ4A6NIV6 560 aa25.74■■□□□ 1.71
COL27A1-208ENST00000494780 F8W810 466 aa25.74■■□□□ 1.71
COL27A1-208ENST00000494780 GALR2O43603 387 aaPredicted RBP25.74■■□□□ 1.71
COL27A1-208ENST00000494780 ST3GAL1Q11201 340 aa25.74■■□□□ 1.71
COL27A1-208ENST00000494780 FUT10Q6P4F1 479 aa25.74■■□□□ 1.71
COL27A1-208ENST00000494780 CDR2LQ86X02 465 aaPredicted RBP25.74■■□□□ 1.71
COL27A1-208ENST00000494780 NACC1Q96RE7 527 aa25.74■■□□□ 1.71
COL27A1-208ENST00000494780 POLR3CQ9BUI4 534 aaPredicted RBP25.74■■□□□ 1.71
COL27A1-208ENST00000494780 GPRC5CQ9NQ84 441 aa25.74■■□□□ 1.71
COL27A1-208ENST00000494780 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.74■■□□□ 1.71
COL27A1-208ENST00000494780 PARP2Q9UGN5 583 aa25.74■■□□□ 1.71
COL27A1-208ENST00000494780 C2orf16Q68DN1 1984 aa25.73■■□□□ 1.71
COL27A1-208ENST00000494780 CCDC195A0A1B0GUA6 201 aa25.73■■□□□ 1.71
COL27A1-208ENST00000494780 ATP2B1P20020 1258 aa25.73■■□□□ 1.71
COL27A1-208ENST00000494780 CDCA2Q69YH5 1023 aaPredicted RBP25.73■■□□□ 1.71
COL27A1-208ENST00000494780 MAEAQ7L5Y9 396 aa25.73■■□□□ 1.71
COL27A1-208ENST00000494780 ZBTB8OSQ8IWT0 167 aa25.73■■□□□ 1.71
COL27A1-208ENST00000494780 ATOH1Q92858 354 aaPredicted RBP25.73■■□□□ 1.71
COL27A1-208ENST00000494780 FZD8Q9H461 694 aa25.73■■□□□ 1.71
COL27A1-208ENST00000494780 ADAM28Q9UKQ2 775 aa25.73■■□□□ 1.71
COL27A1-208ENST00000494780 MED24O75448 989 aa25.72■■□□□ 1.71
COL27A1-208ENST00000494780 ORC2Q13416 577 aaPredicted RBP25.72■■□□□ 1.71
COL27A1-208ENST00000494780 TDGQ13569 410 aa25.72■■□□□ 1.71
COL27A1-208ENST00000494780 FAM187BQ17R55 369 aa25.72■■□□□ 1.71
COL27A1-208ENST00000494780 USP41Q3LFD5 358 aa25.72■■□□□ 1.71
COL27A1-208ENST00000494780 ASTLQ6HA08 431 aaPredicted RBP25.72■■□□□ 1.71
COL27A1-208ENST00000494780 TMEM105Q8N8V8 129 aa25.72■■□□□ 1.71
COL27A1-208ENST00000494780 GPR62Q9BZJ7 368 aa25.72■■□□□ 1.71
COL27A1-208ENST00000494780 MFSD1Q9H3U5 465 aa25.72■■□□□ 1.71
COL27A1-208ENST00000494780 PLEKHA4Q9H4M7 779 aa25.72■■□□□ 1.71
COL27A1-208ENST00000494780 KCNK12Q9HB15 430 aa25.72■■□□□ 1.71
COL27A1-208ENST00000494780 WDR6Q9NNW5 1121 aaKnown RBP25.72■■□□□ 1.71
COL27A1-208ENST00000494780 FAM86C1Q9NVL1 165 aa25.72■■□□□ 1.71
COL27A1-208ENST00000494780 KLK14Q9P0G3 267 aa25.72■■□□□ 1.71
COL27A1-208ENST00000494780 IGSF9Q9P2J2 1179 aa25.72■■□□□ 1.71
COL27A1-208ENST00000494780 PLXNA3P51805 1871 aa25.72■■□□□ 1.71
COL27A1-208ENST00000494780 PAPLNO95428 1278 aa25.71■■□□□ 1.71
COL27A1-208ENST00000494780 ERMNQ8TAM6 284 aa25.71■■□□□ 1.71
COL27A1-208ENST00000494780 STAMQ92783 540 aa25.71■■□□□ 1.71
COL27A1-208ENST00000494780 C2orf40Q9H1Z8 148 aa25.71■■□□□ 1.71
COL27A1-208ENST00000494780 FNIP2Q9P278 1114 aa25.71■■□□□ 1.71
COL27A1-208ENST00000494780 H0Y858 1186 aa25.7■■□□□ 1.7
COL27A1-208ENST00000494780 RPA1P27694 616 aa25.7■■□□□ 1.7
COL27A1-208ENST00000494780 CLCN5P51795 746 aa25.7■■□□□ 1.7
COL27A1-208ENST00000494780 GUCY1B3Q02153 619 aa25.7■■□□□ 1.7
COL27A1-208ENST00000494780 CREMQ03060 361 aa25.7■■□□□ 1.7
COL27A1-208ENST00000494780 ERICH6BQ5W0A0 696 aa25.7■■□□□ 1.7
COL27A1-208ENST00000494780 C8orf76Q96K31 380 aa25.7■■□□□ 1.7
COL27A1-208ENST00000494780 DUSP12Q9UNI6 340 aa25.7■■□□□ 1.7
COL27A1-208ENST00000494780 CLUHO75153 1309 aa25.69■■□□□ 1.7
COL27A1-208ENST00000494780 N4BP3O15049 544 aa25.69■■□□□ 1.7
COL27A1-208ENST00000494780 TADA2AO75478 443 aa25.69■■□□□ 1.7
COL27A1-208ENST00000494780 RFPL2O75678 378 aa25.69■■□□□ 1.7
COL27A1-208ENST00000494780 OR52Z1P0C646 297 aa25.69■■□□□ 1.7
COL27A1-208ENST00000494780 POTEGQ6S5H5 508 aa25.69■■□□□ 1.7
COL27A1-208ENST00000494780 PALB2Q86YC2 1186 aa25.69■■□□□ 1.7
COL27A1-208ENST00000494780 RIN2Q8WYP3 895 aaPredicted RBP25.69■■□□□ 1.7
COL27A1-208ENST00000494780 SMG7Q92540 1137 aaKnown RBP25.69■■□□□ 1.7
COL27A1-208ENST00000494780 B3GALT6Q96L58 329 aa25.69■■□□□ 1.7
COL27A1-208ENST00000494780 LLPHQ9BRT6 129 aaKnown RBP25.69■■□□□ 1.7
COL27A1-208ENST00000494780 LIMCH1Q9UPQ0 1083 aa25.69■■□□□ 1.7
COL27A1-208ENST00000494780 ARHGEF35A5YM69 484 aa25.68■■□□□ 1.7
COL27A1-208ENST00000494780 TGM5O43548 720 aa25.68■■□□□ 1.7
COL27A1-208ENST00000494780 ST18O60284 1047 aa25.68■■□□□ 1.7
COL27A1-208ENST00000494780 N4BP1O75113 896 aaKnown RBP25.68■■□□□ 1.7
COL27A1-208ENST00000494780 SPATA31D3P0C874 917 aa25.68■■□□□ 1.7
COL27A1-208ENST00000494780 CYP11B2P19099 503 aa25.68■■□□□ 1.7
COL27A1-208ENST00000494780 GBP2P32456 591 aaPredicted RBP25.68■■□□□ 1.7
COL27A1-208ENST00000494780 TUSC3Q13454 348 aa25.68■■□□□ 1.7
COL27A1-208ENST00000494780 HSP90AA2PQ14568 343 aaPredicted RBP25.68■■□□□ 1.7
COL27A1-208ENST00000494780 ZNF174Q15697 407 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms