RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 APOEP02649 317 aa20.31■□□□□ 0.84
COL27A1-207ENST00000494090 GPS1Q13098 491 aa20.31■□□□□ 0.84
COL27A1-207ENST00000494090 HP1BP3Q5SSJ5 553 aaPredicted RBP20.31■□□□□ 0.84
COL27A1-207ENST00000494090 CDC26Q8NHZ8 85 aa20.31■□□□□ 0.84
COL27A1-207ENST00000494090 SAAL1Q96ER3 474 aa20.31■□□□□ 0.84
COL27A1-207ENST00000494090 POLIQ9UNA4 740 aa20.31■□□□□ 0.84
COL27A1-207ENST00000494090 LMTK2Q8IWU2 1503 aa20.31■□□□□ 0.84
COL27A1-207ENST00000494090 ACAD11Q709F0 780 aa20.31■□□□□ 0.84
COL27A1-207ENST00000494090 HAUS6Q7Z4H7 955 aa20.31■□□□□ 0.84
COL27A1-207ENST00000494090 TTC8Q8TAM2 541 aa20.31■□□□□ 0.84
COL27A1-207ENST00000494090 PCDHA10Q9Y5I2 948 aa20.31■□□□□ 0.84
COL27A1-207ENST00000494090 HEY1Q9Y5J3 304 aa20.31■□□□□ 0.84
COL27A1-207ENST00000494090 FOXP2O15409 715 aa20.31■□□□□ 0.84
COL27A1-207ENST00000494090 HAUS5O94927 633 aa20.31■□□□□ 0.84
COL27A1-207ENST00000494090 FDPSP14324 419 aaKnown RBP20.31■□□□□ 0.84
COL27A1-207ENST00000494090 FXR1P51114 621 aaKnown RBP eCLIP20.31■□□□□ 0.84
COL27A1-207ENST00000494090 RAD51Q06609 339 aa20.31■□□□□ 0.84
COL27A1-207ENST00000494090 TTC23LQ6PF05 361 aa20.31■□□□□ 0.84
COL27A1-207ENST00000494090 AMACRQ9UHK6 382 aa20.31■□□□□ 0.84
COL27A1-207ENST00000494090 ST13P4Q8IZP2 240 aaPredicted RBP20.31■□□□□ 0.84
COL27A1-207ENST00000494090 GRAMD1AQ96CP6 724 aa20.31■□□□□ 0.84
COL27A1-207ENST00000494090 SPATA33Q96N06 139 aa20.31■□□□□ 0.84
COL27A1-207ENST00000494090 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.31■□□□□ 0.84
COL27A1-207ENST00000494090 ASAP2O43150 1006 aa20.3■□□□□ 0.84
COL27A1-207ENST00000494090 PSMC1P62191 440 aaKnown RBP20.3■□□□□ 0.84
COL27A1-207ENST00000494090 PDS5AQ29RF7 1337 aaKnown RBP20.3■□□□□ 0.84
COL27A1-207ENST00000494090 MYO3AQ8NEV4 1616 aa20.3■□□□□ 0.84
COL27A1-207ENST00000494090 ATP11CQ8NB49 1132 aa20.3■□□□□ 0.84
COL27A1-207ENST00000494090 ANKRD7Q92527 254 aa20.3■□□□□ 0.84
COL27A1-207ENST00000494090 IQSEC2Q5JU85 1478 aa20.3■□□□□ 0.84
COL27A1-207ENST00000494090 ERCC6L2Q5T890 1561 aa20.3■□□□□ 0.84
COL27A1-207ENST00000494090 SLC1A1P43005 524 aa20.3■□□□□ 0.84
COL27A1-207ENST00000494090 PDIA2Q13087 525 aaKnown RBP20.3■□□□□ 0.84
COL27A1-207ENST00000494090 H3BRJ5 948 aa20.3■□□□□ 0.84
COL27A1-207ENST00000494090 KIF19Q2TAC6 998 aa20.3■□□□□ 0.84
COL27A1-207ENST00000494090 GRAMD1BQ3KR37 738 aa20.3■□□□□ 0.84
COL27A1-207ENST00000494090 HEATR6Q6AI08 1181 aaKnown RBP20.3■□□□□ 0.84
COL27A1-207ENST00000494090 EIF2AQ9BY44 585 aaKnown RBP20.3■□□□□ 0.84
COL27A1-207ENST00000494090 MRPL46Q9H2W6 279 aaKnown RBP20.3■□□□□ 0.84
COL27A1-207ENST00000494090 MTMR4Q9NYA4 1195 aa20.3■□□□□ 0.84
COL27A1-207ENST00000494090 STOML1Q9UBI4 398 aa20.3■□□□□ 0.84
COL27A1-207ENST00000494090 CFAP73A6NFT4 308 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 ZNF185O15231 689 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 TKFCQ3LXA3 575 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 IZUMO3Q5VZ72 239 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 ICE2Q659A1 982 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 STK33Q9BYT3 514 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 PARVAQ9NVD7 372 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 DUOXA2Q1HG44 320 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 SNX19Q92543 992 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 TRIM45Q9H8W5 580 aaPredicted RBP20.29■□□□□ 0.84
COL27A1-207ENST00000494090 TRIM33Q9UPN9 1127 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 SYDE1Q6ZW31 735 aaPredicted RBP20.29■□□□□ 0.84
COL27A1-207ENST00000494090 ZBED8Q8IZ13 594 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 BFARQ9NZS9 450 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 CTDNEP1O95476 244 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 ARHGDIAP52565 204 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 COPS2P61201 443 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 ZNF543Q08ER8 600 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 VEPH1Q14D04 833 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 CEP55Q53EZ4 464 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 LRIG3Q6UXM1 1119 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 LRRC43Q8N309 656 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 C1orf54Q8WWF1 131 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 TNIP3Q96KP6 325 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.29■□□□□ 0.84
COL27A1-207ENST00000494090 SLC9A2Q9UBY0 812 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 CHGBP05060 677 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 TEDDM1Q5T9Z0 273 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 ZNF34Q8IZ26 560 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 SH3TC2Q8TF17 1288 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 HPS3Q969F9 1004 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 DDX50Q9BQ39 737 aaKnown RBP20.29■□□□□ 0.84
COL27A1-207ENST00000494090 CENPKQ9BS16 269 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 RNF181Q9P0P0 153 aa20.29■□□□□ 0.84
COL27A1-207ENST00000494090 EFHBQ8N7U6 833 aa20.28■□□□□ 0.84
COL27A1-207ENST00000494090 EXT2Q93063 718 aa20.28■□□□□ 0.84
COL27A1-207ENST00000494090 CYTH2Q99418 400 aa20.28■□□□□ 0.84
COL27A1-207ENST00000494090 MLXIPLQ9NP71 852 aa20.28■□□□□ 0.84
COL27A1-207ENST00000494090 PCSK1NQ9UHG2 260 aa20.28■□□□□ 0.84
COL27A1-207ENST00000494090 A0A1W2PQJ5 194 aa20.28■□□□□ 0.84
COL27A1-207ENST00000494090 TBX3O15119 743 aa20.28■□□□□ 0.84
COL27A1-207ENST00000494090 NMT1P30419 496 aaKnown RBP20.28■□□□□ 0.84
COL27A1-207ENST00000494090 ARFIP2P53365 341 aa20.28■□□□□ 0.84
COL27A1-207ENST00000494090 POLE2P56282 527 aa20.28■□□□□ 0.84
COL27A1-207ENST00000494090 RAD9BQ6WBX8 426 aa20.28■□□□□ 0.84
COL27A1-207ENST00000494090 PPM1NQ8N819 430 aa20.28■□□□□ 0.84
COL27A1-207ENST00000494090 RBM46Q8TBY0 533 aaKnown RBP20.28■□□□□ 0.84
COL27A1-207ENST00000494090 RBAKQ9NYW8 714 aaPredicted RBP20.28■□□□□ 0.84
COL27A1-207ENST00000494090 NPHP3-ACAD11A0A0J9YXS1 232 aa20.28■□□□□ 0.84
COL27A1-207ENST00000494090 PFDN1O60925 122 aa20.28■□□□□ 0.84
COL27A1-207ENST00000494090 ROR1Q01973 937 aa20.28■□□□□ 0.84
COL27A1-207ENST00000494090 KRT17Q04695 432 aa20.28■□□□□ 0.84
COL27A1-207ENST00000494090 BYSLQ13895 437 aaKnown RBP20.28■□□□□ 0.84
COL27A1-207ENST00000494090 SF3B3Q15393 1217 aaKnown RBP20.28■□□□□ 0.84
COL27A1-207ENST00000494090 CCNI2Q6ZMN8 369 aaPredicted RBP20.28■□□□□ 0.84
COL27A1-207ENST00000494090 KIFC3Q9BVG8 833 aa20.28■□□□□ 0.84
COL27A1-207ENST00000494090 AGPAT5Q9NUQ2 364 aa20.28■□□□□ 0.84
COL27A1-207ENST00000494090 NEMP1O14524 444 aa20.28■□□□□ 0.84
COL27A1-207ENST00000494090 STAT4Q14765 748 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms