RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 SP100P23497 879 aaPredicted RBP9.45□□□□□ -0.9
LRCH3-219ENST00000494069 OR1G1P47890 313 aa9.45□□□□□ -0.9
LRCH3-219ENST00000494069 NCBP1Q09161 790 aaKnown RBP9.45□□□□□ -0.9
LRCH3-219ENST00000494069 EEF1DP3Q658K8 133 aa9.45□□□□□ -0.9
LRCH3-219ENST00000494069 CDCA2Q69YH5 1023 aaPredicted RBP9.45□□□□□ -0.9
LRCH3-219ENST00000494069 KCNK18Q7Z418 384 aa9.45□□□□□ -0.9
LRCH3-219ENST00000494069 RNF135Q8IUD6 432 aa9.45□□□□□ -0.9
LRCH3-219ENST00000494069 COLGALT2Q8IYK4 626 aa9.45□□□□□ -0.9
LRCH3-219ENST00000494069 IGSF22Q8N9C0 903 aa9.45□□□□□ -0.9
LRCH3-219ENST00000494069 CNNM3Q8NE01 707 aa9.45□□□□□ -0.9
LRCH3-219ENST00000494069 MCPH1Q8NEM0 835 aa9.45□□□□□ -0.9
LRCH3-219ENST00000494069 SNX29Q8TEQ0 813 aa9.45□□□□□ -0.9
LRCH3-219ENST00000494069 SLC22A17Q8WUG5 538 aa9.45□□□□□ -0.9
LRCH3-219ENST00000494069 CCDC51Q96ER9 411 aa9.45□□□□□ -0.9
LRCH3-219ENST00000494069 RPGRIP1Q96KN7 1286 aa9.45□□□□□ -0.9
LRCH3-219ENST00000494069 MMTAG2Q9BU76 263 aaKnown RBP9.45□□□□□ -0.9
LRCH3-219ENST00000494069 FZD8Q9H461 694 aa9.45□□□□□ -0.9
LRCH3-219ENST00000494069 FAN1Q9Y2M0 1017 aa9.45□□□□□ -0.9
LRCH3-219ENST00000494069 CNTNAP2Q9UHC6 1331 aa9.45□□□□□ -0.9
LRCH3-219ENST00000494069 TRIOO75962 3097 aa9.44□□□□□ -0.9
LRCH3-219ENST00000494069 LOC730098B7Z3J9 87 aa9.44□□□□□ -0.9
LRCH3-219ENST00000494069 C2CD2LO14523 706 aa9.44□□□□□ -0.9
LRCH3-219ENST00000494069 INPPL1O15357 1258 aa9.44□□□□□ -0.9
LRCH3-219ENST00000494069 DCXO43602 365 aa9.44□□□□□ -0.9
LRCH3-219ENST00000494069 GPR37L1O60883 481 aa9.44□□□□□ -0.9
LRCH3-219ENST00000494069 LILRB3O75022 631 aa9.44□□□□□ -0.9
LRCH3-219ENST00000494069 DSC1Q08554 894 aa9.44□□□□□ -0.9
LRCH3-219ENST00000494069 PDIA5Q14554 519 aa9.44□□□□□ -0.9
LRCH3-219ENST00000494069 PCBP1Q15365 356 aaKnown RBP eCLIP9.44□□□□□ -0.9
LRCH3-219ENST00000494069 PTPN14Q15678 1187 aa9.44□□□□□ -0.9
LRCH3-219ENST00000494069 HAUS3Q68CZ6 603 aa9.44□□□□□ -0.9
LRCH3-219ENST00000494069 SLC27A1Q6PCB7 646 aa9.44□□□□□ -0.9
LRCH3-219ENST00000494069 ZBTB8OSQ8IWT0 167 aa9.44□□□□□ -0.9
LRCH3-219ENST00000494069 DEPTORQ8TB45 409 aa9.44□□□□□ -0.9
LRCH3-219ENST00000494069 FAM193BQ96PV7 902 aaPredicted RBP9.44□□□□□ -0.9
LRCH3-219ENST00000494069 PLIN2Q99541 437 aa9.44□□□□□ -0.9
LRCH3-219ENST00000494069 PAAF1Q9BRP4 392 aa9.44□□□□□ -0.9
LRCH3-219ENST00000494069 TMEM175Q9BSA9 504 aa9.44□□□□□ -0.9
LRCH3-219ENST00000494069 PHF7Q9BWX1 381 aaPredicted RBP9.44□□□□□ -0.9
LRCH3-219ENST00000494069 MFRPQ9BY79 579 aa9.44□□□□□ -0.9
LRCH3-219ENST00000494069 TRIM6Q9C030 488 aaPredicted RBP9.44□□□□□ -0.9
LRCH3-219ENST00000494069 CCDC113Q9H0I3 377 aa9.44□□□□□ -0.9
LRCH3-219ENST00000494069 PDZD7Q9H5P4 517 aa9.44□□□□□ -0.9
LRCH3-219ENST00000494069 UBN1Q9NPG3 1134 aa9.44□□□□□ -0.9
LRCH3-219ENST00000494069 PRMT7Q9NVM4 692 aaPredicted RBP9.44□□□□□ -0.9
LRCH3-219ENST00000494069 KANSL3Q9P2N6 904 aa9.44□□□□□ -0.9
LRCH3-219ENST00000494069 PARP2Q9UGN5 583 aa9.44□□□□□ -0.9
LRCH3-219ENST00000494069 GIT1Q9Y2X7 761 aa9.44□□□□□ -0.9
LRCH3-219ENST00000494069 H3BQV1 296 aa9.43□□□□□ -0.9
LRCH3-219ENST00000494069 PRKCBP05771 671 aa9.43□□□□□ -0.9
LRCH3-219ENST00000494069 CNPP09543 421 aaKnown RBP9.43□□□□□ -0.9
LRCH3-219ENST00000494069 MYBP10242 640 aa9.43□□□□□ -0.9
LRCH3-219ENST00000494069 ALADP13716 330 aa9.43□□□□□ -0.9
LRCH3-219ENST00000494069 MUTP22033 750 aa9.43□□□□□ -0.9
LRCH3-219ENST00000494069 NAMPTP43490 491 aa9.43□□□□□ -0.9
LRCH3-219ENST00000494069 PRPF4BQ13523 1007 aaKnown RBP9.43□□□□□ -0.9
LRCH3-219ENST00000494069 CBX2Q14781 532 aaPredicted RBP9.43□□□□□ -0.9
LRCH3-219ENST00000494069 ZRSR1Q15695 479 aaKnown RBP9.43□□□□□ -0.9
LRCH3-219ENST00000494069 FAM187BQ17R55 369 aa9.43□□□□□ -0.9
LRCH3-219ENST00000494069 RARS2Q5T160 578 aaKnown RBP9.43□□□□□ -0.9
LRCH3-219ENST00000494069 NT5DC1Q5TFE4 455 aa9.43□□□□□ -0.9
LRCH3-219ENST00000494069 DTHD1Q6ZMT9 781 aa9.43□□□□□ -0.9
LRCH3-219ENST00000494069 DAW1Q8N136 415 aa9.43□□□□□ -0.9
LRCH3-219ENST00000494069 RSPH1Q8WYR4 309 aa9.43□□□□□ -0.9
LRCH3-219ENST00000494069 CASP10Q92851 521 aa9.43□□□□□ -0.9
LRCH3-219ENST00000494069 B3GALT6Q96L58 329 aa9.43□□□□□ -0.9
LRCH3-219ENST00000494069 KLHL5Q96PQ7 755 aa9.43□□□□□ -0.9
LRCH3-219ENST00000494069 PNMA5Q96PV4 448 aa9.43□□□□□ -0.9
LRCH3-219ENST00000494069 POP1Q99575 1024 aaKnown RBP9.43□□□□□ -0.9
LRCH3-219ENST00000494069 RUSC1Q9BVN2 902 aa9.43□□□□□ -0.9
LRCH3-219ENST00000494069 TMEM121BQ9BXQ6 578 aaPredicted RBP9.43□□□□□ -0.9
LRCH3-219ENST00000494069 UPF2Q9HAU5 1272 aaKnown RBP9.43□□□□□ -0.9
LRCH3-219ENST00000494069 SNTG2Q9NY99 539 aa9.43□□□□□ -0.9
LRCH3-219ENST00000494069 SMC3Q9UQE7 1217 aa9.43□□□□□ -0.9
LRCH3-219ENST00000494069 IRAK3Q9Y616 596 aa9.43□□□□□ -0.9
LRCH3-219ENST00000494069 SFI1A8K8P3 1242 aa9.42□□□□□ -0.9
LRCH3-219ENST00000494069 ACKR2O00590 384 aa9.42□□□□□ -0.9
LRCH3-219ENST00000494069 PTGESO14684 152 aa9.42□□□□□ -0.9
LRCH3-219ENST00000494069 HIP1RO75146 1068 aa9.42□□□□□ -0.9
LRCH3-219ENST00000494069 EFEMP2O95967 443 aa9.42□□□□□ -0.9
LRCH3-219ENST00000494069 SOD2P04179 222 aa9.42□□□□□ -0.9
LRCH3-219ENST00000494069 SRGAP2BP0DMP2 458 aa9.42□□□□□ -0.9
LRCH3-219ENST00000494069 HOXB8P17481 243 aaPredicted RBP9.42□□□□□ -0.9
LRCH3-219ENST00000494069 IGFBP6P24592 240 aaPredicted RBP9.42□□□□□ -0.9
LRCH3-219ENST00000494069 KLRC2P26717 231 aa9.42□□□□□ -0.9
LRCH3-219ENST00000494069 PRPHP41219 470 aa9.42□□□□□ -0.9
LRCH3-219ENST00000494069 PEX3P56589 373 aa9.42□□□□□ -0.9
LRCH3-219ENST00000494069 ATP2C1P98194 919 aaPredicted RBP9.42□□□□□ -0.9
LRCH3-219ENST00000494069 GRIN1Q05586 938 aa9.42□□□□□ -0.9
LRCH3-219ENST00000494069 MAPK7Q13164 816 aa9.42□□□□□ -0.9
LRCH3-219ENST00000494069 MAPK6Q16659 721 aa9.42□□□□□ -0.9
LRCH3-219ENST00000494069 RILPL1Q5EBL4 403 aa9.42□□□□□ -0.9
LRCH3-219ENST00000494069 HERC4Q5GLZ8 1057 aaPredicted RBP9.42□□□□□ -0.9
LRCH3-219ENST00000494069 KRT79Q5XKE5 535 aa9.42□□□□□ -0.9
LRCH3-219ENST00000494069 RINT1Q6NUQ1 792 aa9.42□□□□□ -0.9
LRCH3-219ENST00000494069 TMC5Q6UXY8 1006 aa9.42□□□□□ -0.9
LRCH3-219ENST00000494069 C1orf186Q6ZWK4 172 aa9.42□□□□□ -0.9
LRCH3-219ENST00000494069 RNF168Q8IYW5 571 aaPredicted RBP9.42□□□□□ -0.9
LRCH3-219ENST00000494069 TMEM87AQ8NBN3 555 aa9.42□□□□□ -0.9
LRCH3-219ENST00000494069 LRRC15Q8TF66 581 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms