RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 CSRP2Q16527 193 aa5.55□□□□□ -1.52
CLIP4-212ENST00000493551 HSP90AB3PQ58FF7 597 aa5.55□□□□□ -1.52
CLIP4-212ENST00000493551 ARMC9Q7Z3E5 817 aa5.55□□□□□ -1.52
CLIP4-212ENST00000493551 TRIM59Q8IWR1 403 aa5.55□□□□□ -1.52
CLIP4-212ENST00000493551 OR6P1Q8NGX9 317 aa5.55□□□□□ -1.52
CLIP4-212ENST00000493551 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.55□□□□□ -1.52
CLIP4-212ENST00000493551 TRAIPQ9BWF2 469 aa5.55□□□□□ -1.52
CLIP4-212ENST00000493551 BCL11AQ9H165 835 aa5.55□□□□□ -1.52
CLIP4-212ENST00000493551 SMOC1Q9H4F8 434 aa5.55□□□□□ -1.52
CLIP4-212ENST00000493551 EPB41L1Q9H4G0 881 aa5.55□□□□□ -1.52
CLIP4-212ENST00000493551 FBXL7Q9UJT9 491 aa5.55□□□□□ -1.52
CLIP4-212ENST00000493551 PTPN22Q9Y2R2 807 aa5.55□□□□□ -1.52
CLIP4-212ENST00000493551 AOX1Q06278 1338 aa5.54□□□□□ -1.52
CLIP4-212ENST00000493551 ZSWIM8A7E2V4 1837 aa5.54□□□□□ -1.52
CLIP4-212ENST00000493551 ARNTLO00327 626 aa5.54□□□□□ -1.52
CLIP4-212ENST00000493551 WNT10BO00744 389 aa5.54□□□□□ -1.52
CLIP4-212ENST00000493551 MEFVO15553 781 aaPredicted RBP5.54□□□□□ -1.52
CLIP4-212ENST00000493551 HTATSF1O43719 755 aaKnown RBP5.54□□□□□ -1.52
CLIP4-212ENST00000493551 RAMP2O60895 175 aa5.54□□□□□ -1.52
CLIP4-212ENST00000493551 SLC9C1Q4G0N8 1177 aa5.54□□□□□ -1.52
CLIP4-212ENST00000493551 KIAA1211LQ6NV74 962 aa5.54□□□□□ -1.52
CLIP4-212ENST00000493551 TRIM48Q8IWZ4 208 aa5.54□□□□□ -1.52
CLIP4-212ENST00000493551 CCDC146Q8IYE0 955 aa5.54□□□□□ -1.52
CLIP4-212ENST00000493551 AGBL3Q8NEM8 1001 aa5.54□□□□□ -1.52
CLIP4-212ENST00000493551 ERO1AQ96HE7 468 aa5.54□□□□□ -1.52
CLIP4-212ENST00000493551 WNK4Q96J92 1243 aa5.54□□□□□ -1.52
CLIP4-212ENST00000493551 APBA2Q99767 749 aa5.54□□□□□ -1.52
CLIP4-212ENST00000493551 MYD88Q99836 296 aa5.54□□□□□ -1.52
CLIP4-212ENST00000493551 ARHGAP39Q9C0H5 1083 aa5.54□□□□□ -1.52
CLIP4-212ENST00000493551 VEZTQ9HBM0 779 aa5.54□□□□□ -1.52
CLIP4-212ENST00000493551 KCND1Q9NSA2 647 aa5.54□□□□□ -1.52
CLIP4-212ENST00000493551 AURKAIP1Q9NWT8 199 aaPredicted RBP5.54□□□□□ -1.52
CLIP4-212ENST00000493551 ASH2LQ9UBL3 628 aa5.54□□□□□ -1.52
CLIP4-212ENST00000493551 ZFP69BQ9UJL9 534 aa5.54□□□□□ -1.52
CLIP4-212ENST00000493551 ZNF609O15014 1411 aa5.54□□□□□ -1.52
CLIP4-212ENST00000493551 MANSC4A6NHS7 340 aaPredicted RBP5.53□□□□□ -1.52
CLIP4-212ENST00000493551 SNAP23O00161 211 aa5.53□□□□□ -1.52
CLIP4-212ENST00000493551 ZNF888P0CJ79 500 aaPredicted RBP5.53□□□□□ -1.52
CLIP4-212ENST00000493551 FBLP22087 321 aaKnown RBP5.53□□□□□ -1.52
CLIP4-212ENST00000493551 DNAJA1P31689 397 aaKnown RBP5.53□□□□□ -1.52
CLIP4-212ENST00000493551 ZNF143P52747 638 aaPredicted RBP5.53□□□□□ -1.52
CLIP4-212ENST00000493551 RIPK4P57078 832 aa5.53□□□□□ -1.52
CLIP4-212ENST00000493551 SP3Q02447 781 aa5.53□□□□□ -1.52
CLIP4-212ENST00000493551 LSAMPQ13449 338 aa5.53□□□□□ -1.52
CLIP4-212ENST00000493551 SF3B3Q15393 1217 aaKnown RBP5.53□□□□□ -1.52
CLIP4-212ENST00000493551 ZNF627Q7L945 461 aa5.53□□□□□ -1.52
CLIP4-212ENST00000493551 CHAMP1Q96JM3 812 aa5.53□□□□□ -1.52
CLIP4-212ENST00000493551 OR14A2Q96R54 314 aa5.53□□□□□ -1.52
CLIP4-212ENST00000493551 GMLQ99445 158 aa5.53□□□□□ -1.52
CLIP4-212ENST00000493551 ZNF703Q9H7S9 590 aaPredicted RBP5.53□□□□□ -1.52
CLIP4-212ENST00000493551 SSC5DA1L4H1 1573 aa5.53□□□□□ -1.52
CLIP4-212ENST00000493551 SPEF2Q9C093 1822 aa5.53□□□□□ -1.52
CLIP4-212ENST00000493551 H0Y858 1186 aa5.52□□□□□ -1.53
CLIP4-212ENST00000493551 ELL2O00472 640 aaPredicted RBP5.52□□□□□ -1.53
CLIP4-212ENST00000493551 KRIT1O00522 736 aa5.52□□□□□ -1.53
CLIP4-212ENST00000493551 CDC14BO60729 498 aa5.52□□□□□ -1.53
CLIP4-212ENST00000493551 IL12RB1P42701 662 aa5.52□□□□□ -1.53
CLIP4-212ENST00000493551 RBM5P52756 815 aaKnown RBP eCLIP5.52□□□□□ -1.53
CLIP4-212ENST00000493551 TESK1Q15569 626 aa5.52□□□□□ -1.53
CLIP4-212ENST00000493551 SKIDA1Q1XH10 827 aa5.52□□□□□ -1.53
CLIP4-212ENST00000493551 DACT2Q5SW24 774 aa5.52□□□□□ -1.53
CLIP4-212ENST00000493551 VHLLQ6RSH7 139 aa5.52□□□□□ -1.53
CLIP4-212ENST00000493551 ANKRD18AQ8IVF6 992 aa5.52□□□□□ -1.53
CLIP4-212ENST00000493551 RCBTB1Q8NDN9 531 aa5.52□□□□□ -1.53
CLIP4-212ENST00000493551 PLBD2Q8NHP8 589 aa5.52□□□□□ -1.53
CLIP4-212ENST00000493551 ARMC5Q96C12 935 aa5.52□□□□□ -1.53
CLIP4-212ENST00000493551 ZNF333Q96JL9 665 aa5.52□□□□□ -1.53
CLIP4-212ENST00000493551 MRGPRX3Q96LB0 322 aa5.52□□□□□ -1.53
CLIP4-212ENST00000493551 PLEKHF1Q96S99 279 aa5.52□□□□□ -1.53
CLIP4-212ENST00000493551 ISCA1Q9BUE6 129 aa5.52□□□□□ -1.53
CLIP4-212ENST00000493551 DEFB129Q9H1M3 183 aa5.52□□□□□ -1.53
CLIP4-212ENST00000493551 CLDND1Q9NY35 253 aa5.52□□□□□ -1.53
CLIP4-212ENST00000493551 ARHGAP20Q9P2F6 1191 aa5.52□□□□□ -1.53
CLIP4-212ENST00000493551 XDHP47989 1333 aa5.51□□□□□ -1.53
CLIP4-212ENST00000493551 GIPRP48546 466 aa5.51□□□□□ -1.53
CLIP4-212ENST00000493551 DLGAP5Q15398 846 aa5.51□□□□□ -1.53
CLIP4-212ENST00000493551 RNF151Q2KHN1 245 aa5.51□□□□□ -1.53
CLIP4-212ENST00000493551 CCDC152Q4G0S7 254 aa5.51□□□□□ -1.53
CLIP4-212ENST00000493551 LDLRAD1Q5T700 205 aa5.51□□□□□ -1.53
CLIP4-212ENST00000493551 ACBD5Q5T8D3 534 aaPredicted RBP5.51□□□□□ -1.53
CLIP4-212ENST00000493551 Q7L0L9 218 aa5.51□□□□□ -1.53
CLIP4-212ENST00000493551 APOBEC3FQ8IUX4 373 aaKnown RBP5.51□□□□□ -1.53
CLIP4-212ENST00000493551 ZNF808Q8N4W9 903 aaPredicted RBP5.51□□□□□ -1.53
CLIP4-212ENST00000493551 STPG3Q8N7X2 389 aa5.51□□□□□ -1.53
CLIP4-212ENST00000493551 OPTNQ96CV9 577 aa5.51□□□□□ -1.53
CLIP4-212ENST00000493551 DPYSL5Q9BPU6 564 aa5.51□□□□□ -1.53
CLIP4-212ENST00000493551 PODXL2Q9NZ53 605 aa5.51□□□□□ -1.53
CLIP4-212ENST00000493551 PCDHA2Q9Y5H9 948 aa5.51□□□□□ -1.53
CLIP4-212ENST00000493551 CCL15-CCL14A0A0B4J2E2 113 aa5.5□□□□□ -1.53
CLIP4-212ENST00000493551 CUTAO60888 179 aa5.5□□□□□ -1.53
CLIP4-212ENST00000493551 CKMP06732 381 aa5.5□□□□□ -1.53
CLIP4-212ENST00000493551 ZNF76P36508 570 aa5.5□□□□□ -1.53
CLIP4-212ENST00000493551 RPS19P39019 145 aaKnown RBP5.5□□□□□ -1.53
CLIP4-212ENST00000493551 KCNJ4P48050 445 aa5.5□□□□□ -1.53
CLIP4-212ENST00000493551 GLRBP48167 497 aa5.5□□□□□ -1.53
CLIP4-212ENST00000493551 CCL15Q16663 113 aa5.5□□□□□ -1.53
CLIP4-212ENST00000493551 CCDC142Q17RM4 750 aa5.5□□□□□ -1.53
CLIP4-212ENST00000493551 CFAP100Q494V2 611 aa5.5□□□□□ -1.53
CLIP4-212ENST00000493551 ZMAT1Q5H9K5 638 aa5.5□□□□□ -1.53
CLIP4-212ENST00000493551 TTLL5Q6EMB2 1281 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms