RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 J3QL48 77 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 DDX39AO00148 427 aaKnown RBP7.52□□□□□ -1.21
VPS52-219ENST00000493379 TNFRSF10BO14763 440 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 C22orf31O95567 290 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 PFKMP08237 780 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 ZSCAN22P10073 491 aaPredicted RBP7.52□□□□□ -1.21
VPS52-219ENST00000493379 CYP2C9P11712 490 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 CKBP12277 381 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 KLRC1P26715 233 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 TECP42680 631 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 CDC42EP1Q00587 391 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 SP4Q02446 784 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 CENPCQ03188 943 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 MGAT3Q09327 533 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 PPFIA1Q13136 1202 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 GNL2Q13823 731 aaKnown RBP7.52□□□□□ -1.21
VPS52-219ENST00000493379 BECN1Q14457 450 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 SLC39A14Q15043 492 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 TEAD4Q15561 434 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 MCTP1Q6DN14 999 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 PSRC1Q6PGN9 363 aaPredicted RBP7.52□□□□□ -1.21
VPS52-219ENST00000493379 MTHFD1LQ6UB35 978 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 CATSPER3Q86XQ3 398 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 EXOC8Q8IYI6 725 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 KIAA0319LQ8IZA0 1049 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 TMEM199Q8N511 208 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 WNT8BQ93098 351 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 AK8Q96MA6 479 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 EIF2AK1Q9BQI3 630 aaKnown RBP7.52□□□□□ -1.21
VPS52-219ENST00000493379 PRKD2Q9BZL6 878 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 DHX33Q9H6R0 707 aaKnown RBP7.52□□□□□ -1.21
VPS52-219ENST00000493379 ZFAND3Q9H8U3 227 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 ANKEF1Q9NU02 776 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 DLL3Q9NYJ7 618 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 TCEAL9Q9UHQ7 104 aa7.52□□□□□ -1.21
VPS52-219ENST00000493379 HELZ2Q9BYK8 2649 aaKnown RBP7.52□□□□□ -1.21
VPS52-219ENST00000493379 GAS2O43903 313 aaKnown RBP7.51□□□□□ -1.21
VPS52-219ENST00000493379 GDF9O60383 454 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 MAFO75444 373 aaPredicted RBP7.51□□□□□ -1.21
VPS52-219ENST00000493379 F13A1P00488 732 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 PDGFBP01127 241 aaPredicted RBP7.51□□□□□ -1.21
VPS52-219ENST00000493379 CHRNA1P02708 482 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 TIMP2P16035 220 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 SELPP16109 830 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 ATP2B1P20020 1258 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 WDR4P57081 412 aaKnown RBP7.51□□□□□ -1.21
VPS52-219ENST00000493379 PRKCEQ02156 737 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 TAP1Q03518 808 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 POU5F1BQ06416 359 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 MBTPS1Q14703 1052 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 SF3A1Q15459 793 aaKnown RBP7.51□□□□□ -1.21
VPS52-219ENST00000493379 ZNF618Q5T7W0 954 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 DTHD1Q6ZMT9 781 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 OTUD6AQ7L8S5 288 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 ADHFE1Q8IWW8 467 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 RGL4Q8IZJ4 473 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 CCDC155Q8N6L0 562 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 LINC00301Q8NCQ3 95 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 GIPC2Q8TF65 315 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 ZDHHC1Q8WTX9 485 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 MYO19Q96H55 970 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 DYDC2Q96IM9 177 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 RBCK1Q9BYM8 510 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 CCSER1Q9C0I3 900 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 IL23AQ9NPF7 189 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 RGL1Q9NZL6 768 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 STIM2Q9P246 746 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 TUBE1Q9UJT0 475 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 DBR1Q9UK59 544 aaKnown RBP7.51□□□□□ -1.21
VPS52-219ENST00000493379 RCOR1Q9UKL0 485 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 LRFN2Q9ULH4 789 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 SAMM50Q9Y512 469 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 SRPRBQ9Y5M8 271 aaKnown RBP7.51□□□□□ -1.21
VPS52-219ENST00000493379 UMODL1Q5DID0 1318 aa7.51□□□□□ -1.21
VPS52-219ENST00000493379 SERTM1A2A2V5 107 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 TTC24A2A3L6 582 aaPredicted RBP7.5□□□□□ -1.21
VPS52-219ENST00000493379 VPS37CA5D8V6 355 aaPredicted RBP7.5□□□□□ -1.21
VPS52-219ENST00000493379 RSPH10B2B2RC85 870 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 MEN1O00255 615 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 MARCH6O60337 910 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 NBNO60934 754 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 PPP6R2O75170 966 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 GPR32O75388 356 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 MED24O75448 989 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 YEATS4O95619 227 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 FGBP02675 491 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 RSPH10BP0C881 870 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 MARK3P27448 753 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 YWHABP31946 246 aaKnown RBP7.5□□□□□ -1.21
VPS52-219ENST00000493379 CYP2C18P33260 490 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 NOS2P35228 1153 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 LONP1P36776 959 aaKnown RBP7.5□□□□□ -1.21
VPS52-219ENST00000493379 EIF1AXP47813 144 aaKnown RBP7.5□□□□□ -1.21
VPS52-219ENST00000493379 RARRES1P49788 294 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 RELBQ01201 579 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 PKP1Q13835 747 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 RSPO4Q2I0M5 234 aaPredicted RBP7.5□□□□□ -1.21
VPS52-219ENST00000493379 TMEM266Q2M3C6 531 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 FAM47CQ5HY64 1035 aa7.5□□□□□ -1.21
VPS52-219ENST00000493379 SH3PXD2AQ5TCZ1 1133 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms