RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 FGFR4P22455 802 aa14.71□□□□□ -0.05
MSH6-208ENST00000493177 ABCD1P33897 745 aa14.71□□□□□ -0.05
MSH6-208ENST00000493177 PPP1R2P41236 205 aa14.71□□□□□ -0.05
MSH6-208ENST00000493177 PRCPP42785 496 aa14.71□□□□□ -0.05
MSH6-208ENST00000493177 PTENP60484 403 aa14.71□□□□□ -0.05
MSH6-208ENST00000493177 MRPS5P82675 430 aaKnown RBP14.71□□□□□ -0.05
MSH6-208ENST00000493177 STRN3Q13033 797 aa14.71□□□□□ -0.05
MSH6-208ENST00000493177 TMEM132AQ24JP5 1023 aa14.71□□□□□ -0.05
MSH6-208ENST00000493177 AAK1Q2M2I8 961 aa14.71□□□□□ -0.05
MSH6-208ENST00000493177 ANO6Q4KMQ2 910 aa14.71□□□□□ -0.05
MSH6-208ENST00000493177 ABI1Q8IZP0 508 aa14.71□□□□□ -0.05
MSH6-208ENST00000493177 SYCP3Q8IZU3 236 aa14.71□□□□□ -0.05
MSH6-208ENST00000493177 RNF169Q8NCN4 708 aa14.71□□□□□ -0.05
MSH6-208ENST00000493177 SCFD1Q8WVM8 642 aa14.71□□□□□ -0.05
MSH6-208ENST00000493177 BICD1Q96G01 975 aa14.71□□□□□ -0.05
MSH6-208ENST00000493177 ACCSQ96QU6 501 aa14.71□□□□□ -0.05
MSH6-208ENST00000493177 NTPCRQ9BSD7 190 aaKnown RBP14.71□□□□□ -0.05
MSH6-208ENST00000493177 FUCA2Q9BTY2 467 aa14.71□□□□□ -0.05
MSH6-208ENST00000493177 C11orf84Q9BUA3 381 aaPredicted RBP14.71□□□□□ -0.05
MSH6-208ENST00000493177 DNAJC25Q9H1X3 360 aa14.71□□□□□ -0.05
MSH6-208ENST00000493177 ADAMTS10Q9H324 1103 aa14.71□□□□□ -0.05
MSH6-208ENST00000493177 TSPY26PQ9H489 355 aa14.71□□□□□ -0.05
MSH6-208ENST00000493177 ARHGAP28Q9P2N2 729 aa14.71□□□□□ -0.05
MSH6-208ENST00000493177 CTNND2Q9UQB3 1225 aa14.71□□□□□ -0.05
MSH6-208ENST00000493177 PRRC2BQ5JSZ5 2229 aaKnown RBP14.71□□□□□ -0.05
MSH6-208ENST00000493177 UBE4BO95155 1302 aa14.7□□□□□ -0.06
MSH6-208ENST00000493177 PHLPP2Q6ZVD8 1323 aa14.7□□□□□ -0.06
MSH6-208ENST00000493177 H3BNC9 293 aa14.7□□□□□ -0.06
MSH6-208ENST00000493177 PSMA7O14818 248 aa14.7□□□□□ -0.06
MSH6-208ENST00000493177 PRKCBP05771 671 aa14.7□□□□□ -0.06
MSH6-208ENST00000493177 RB1P06400 928 aa14.7□□□□□ -0.06
MSH6-208ENST00000493177 DARSP14868 501 aaKnown RBP14.7□□□□□ -0.06
MSH6-208ENST00000493177 CD44P16070 742 aaKnown RBP14.7□□□□□ -0.06
MSH6-208ENST00000493177 BMPR1AP36894 532 aa14.7□□□□□ -0.06
MSH6-208ENST00000493177 GATMP50440 423 aa14.7□□□□□ -0.06
MSH6-208ENST00000493177 EFNA5P52803 228 aa14.7□□□□□ -0.06
MSH6-208ENST00000493177 ZNF445P59923 1031 aa14.7□□□□□ -0.06
MSH6-208ENST00000493177 GTF2BQ00403 316 aa14.7□□□□□ -0.06
MSH6-208ENST00000493177 TIGD5Q53EQ6 642 aa14.7□□□□□ -0.06
MSH6-208ENST00000493177 CDCA2Q69YH5 1023 aaPredicted RBP14.7□□□□□ -0.06
MSH6-208ENST00000493177 EP400NLQ6ZTU2 488 aa14.7□□□□□ -0.06
MSH6-208ENST00000493177 C11orf57Q6ZUT1 292 aaPredicted RBP14.7□□□□□ -0.06
MSH6-208ENST00000493177 ADSSL1Q8N142 457 aa14.7□□□□□ -0.06
MSH6-208ENST00000493177 GUF1Q8N442 669 aaKnown RBP14.7□□□□□ -0.06
MSH6-208ENST00000493177 ZNF507Q8TCN5 953 aa14.7□□□□□ -0.06
MSH6-208ENST00000493177 HLA-CQ95604 372 aa14.7□□□□□ -0.06
MSH6-208ENST00000493177 ZNF689Q96CS4 500 aaPredicted RBP14.7□□□□□ -0.06
MSH6-208ENST00000493177 HVCN1Q96D96 273 aa14.7□□□□□ -0.06
MSH6-208ENST00000493177 MRPL38Q96DV4 380 aaKnown RBP14.7□□□□□ -0.06
MSH6-208ENST00000493177 COL25A1Q9BXS0 654 aaPredicted RBP14.7□□□□□ -0.06
MSH6-208ENST00000493177 NAT10Q9H0A0 1025 aaKnown RBP14.7□□□□□ -0.06
MSH6-208ENST00000493177 ST6GALNAC4Q9H4F1 302 aa14.7□□□□□ -0.06
MSH6-208ENST00000493177 TMEM134Q9H6X4 195 aa14.7□□□□□ -0.06
MSH6-208ENST00000493177 AAASQ9NRG9 546 aa14.7□□□□□ -0.06
MSH6-208ENST00000493177 TBX20Q9UMR3 447 aa14.7□□□□□ -0.06
MSH6-208ENST00000493177 COG5Q9UP83 839 aa14.7□□□□□ -0.06
MSH6-208ENST00000493177 EXOC7Q9UPT5 735 aa14.7□□□□□ -0.06
MSH6-208ENST00000493177 MRPL42Q9Y6G3 142 aaKnown RBP14.7□□□□□ -0.06
MSH6-208ENST00000493177 TCF20Q9UGU0 1960 aaKnown RBP14.7□□□□□ -0.06
MSH6-208ENST00000493177 ATG2AQ2TAZ0 1938 aa14.69□□□□□ -0.06
MSH6-208ENST00000493177 PPP1R3GB7ZBB8 358 aa14.69□□□□□ -0.06
MSH6-208ENST00000493177 HOXA2O43364 376 aa14.69□□□□□ -0.06
MSH6-208ENST00000493177 CSDE1O75534 798 aaKnown RBP14.69□□□□□ -0.06
MSH6-208ENST00000493177 SCP2P22307 547 aa14.69□□□□□ -0.06
MSH6-208ENST00000493177 STX17P56962 302 aa14.69□□□□□ -0.06
MSH6-208ENST00000493177 MBTD1Q05BQ5 628 aa14.69□□□□□ -0.06
MSH6-208ENST00000493177 POU5F1BQ06416 359 aa14.69□□□□□ -0.06
MSH6-208ENST00000493177 PAK1Q13153 545 aa14.69□□□□□ -0.06
MSH6-208ENST00000493177 MAPK6Q16659 721 aa14.69□□□□□ -0.06
MSH6-208ENST00000493177 EPM2AIP1Q7L775 607 aaPredicted RBP14.69□□□□□ -0.06
MSH6-208ENST00000493177 CATSPER4Q7RTX7 472 aa14.69□□□□□ -0.06
MSH6-208ENST00000493177 SRGAP1Q7Z6B7 1085 aa14.69□□□□□ -0.06
MSH6-208ENST00000493177 NELFBQ8WX92 580 aa14.69□□□□□ -0.06
MSH6-208ENST00000493177 DHTKD1Q96HY7 919 aaPredicted RBP14.69□□□□□ -0.06
MSH6-208ENST00000493177 TSG101Q99816 390 aa14.69□□□□□ -0.06
MSH6-208ENST00000493177 NFKBIZQ9BYH8 718 aa14.69□□□□□ -0.06
MSH6-208ENST00000493177 TMEM206Q9H813 350 aa14.69□□□□□ -0.06
MSH6-208ENST00000493177 IFT122Q9HBG6 1241 aa14.69□□□□□ -0.06
MSH6-208ENST00000493177 TMEM161AQ9NX61 479 aa14.69□□□□□ -0.06
MSH6-208ENST00000493177 PIN4Q9Y237 131 aaKnown RBP14.69□□□□□ -0.06
MSH6-208ENST00000493177 PLXNA4Q9HCM2 1894 aa14.69□□□□□ -0.06
MSH6-208ENST00000493177 C9IYK1 514 aa14.68□□□□□ -0.06
MSH6-208ENST00000493177 PPP1R37O75864 691 aa14.68□□□□□ -0.06
MSH6-208ENST00000493177 ERLIN2O94905 339 aa14.68□□□□□ -0.06
MSH6-208ENST00000493177 FGFR1P11362 822 aa14.68□□□□□ -0.06
MSH6-208ENST00000493177 KCNA1Q09470 495 aa14.68□□□□□ -0.06
MSH6-208ENST00000493177 KNOP1Q1ED39 458 aaKnown RBP14.68□□□□□ -0.06
MSH6-208ENST00000493177 BMT2Q1RMZ1 405 aa14.68□□□□□ -0.06
MSH6-208ENST00000493177 COBLL1Q53SF7 1204 aa14.68□□□□□ -0.06
MSH6-208ENST00000493177 TWF2Q6IBS0 349 aaKnown RBP14.68□□□□□ -0.06
MSH6-208ENST00000493177 IFNLR1Q8IU57 520 aaPredicted RBP14.68□□□□□ -0.06
MSH6-208ENST00000493177 MAP4K3Q8IVH8 894 aa14.68□□□□□ -0.06
MSH6-208ENST00000493177 ASB2Q96Q27 587 aa14.68□□□□□ -0.06
MSH6-208ENST00000493177 STRA6Q9BX79 667 aa14.68□□□□□ -0.06
MSH6-208ENST00000493177 PLVAPQ9BX97 442 aa14.68□□□□□ -0.06
MSH6-208ENST00000493177 ELAC1Q9H777 363 aaKnown RBP14.68□□□□□ -0.06
MSH6-208ENST00000493177 MINDY3Q9H8M7 445 aa14.68□□□□□ -0.06
MSH6-208ENST00000493177 RC3H2Q9HBD1 1191 aaKnown RBP14.68□□□□□ -0.06
MSH6-208ENST00000493177 PRMT7Q9NVM4 692 aaPredicted RBP14.68□□□□□ -0.06
MSH6-208ENST00000493177 PCDHB12Q9Y5F1 795 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms