RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, human

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR4-215	ENST00000492606	GOLGA6L1	Q8N7Z2	621 aa		4.93	□□□□□ -1.62
UBR4-215	ENST00000492606	GALNT11	Q8NCW6	608 aa		4.93	□□□□□ -1.62
UBR4-215	ENST00000492606	CAGE1	Q8TC20	777 aa		4.93	□□□□□ -1.62
UBR4-215	ENST00000492606	ACSF2	Q96CM8	615 aa	Predicted RBP	4.93	□□□□□ -1.62
UBR4-215	ENST00000492606	FGD4	Q96M96	766 aa		4.93	□□□□□ -1.62
UBR4-215	ENST00000492606	CDCA3	Q99618	268 aa	Predicted RBP	4.93	□□□□□ -1.62
UBR4-215	ENST00000492606	RPAP3	Q9H6T3	665 aa	Predicted RBP	4.93	□□□□□ -1.62
UBR4-215	ENST00000492606	BRMS1	Q9HCU9	246 aa		4.93	□□□□□ -1.62
UBR4-215	ENST00000492606	PPT2	Q9UMR5	302 aa		4.93	□□□□□ -1.62
UBR4-215	ENST00000492606	MRVI1	Q9Y6F6	885 aa		4.93	□□□□□ -1.62
UBR4-215	ENST00000492606	ADGRA3	Q8IWK6	1321 aa		4.93	□□□□□ -1.62
UBR4-215	ENST00000492606	C2orf16	Q68DN1	1984 aa		4.93	□□□□□ -1.62
UBR4-215	ENST00000492606	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	ADAMTS9	Q9P2N4	1935 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	LNP1	A1A4G5	178 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	LINC01387	J3KSC0	135 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	GFRA2	O00451	464 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	ZNF862	O60290	1169 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	ZEB2	O60315	1214 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	STK10	O94804	968 aa	Known RBP	4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	GDF11	O95390	407 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	DLGAP3	O95886	979 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	AFP	P02771	609 aa	Known RBP	4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	C8A	P07357	584 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	ASNS	P08243	561 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	GSTP1	P09211	210 aa	Known RBP	4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	SRGAP2B	P0DMP2	458 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	MPL	P40238	635 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	MAGEA9	P43362	315 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	RAP1GAP	P47736	663 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	GIPR	P48546	466 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	PURA	Q00577	322 aa	Known RBP	4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	NFKB2	Q00653	900 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	SETDB1	Q15047	1291 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	NFE2L2	Q16236	605 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	UAP1L1	Q3KQV9	507 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	SEZ6	Q53EL9	994 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	SCARA3	Q6AZY7	606 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	SLC4A10	Q6U841	1118 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	CCDC81	Q6ZN84	652 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	NOL8	Q76FK4	1167 aa	Known RBP	4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	REC114	Q7Z4M0	266 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	MORC1	Q86VD1	984 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	IL22RA1	Q8N6P7	574 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	FAM133A	Q8N9E0	248 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	CCDC191	Q8NCU4	936 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	ST13P5	Q8NFI4	369 aa	Predicted RBP	4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	WDR89	Q96FK6	387 aa	Predicted RBP	4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	BTBD6	Q96KE9	485 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	OSBPL6	Q9BZF3	934 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	MIR1-1HG	Q9H1L0	117 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	ABHD16B	Q9H3Z7	469 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	LRRC4C	Q9HCJ2	640 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	LTB4R2	Q9NPC1	389 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	GDF2	Q9UK05	429 aa	Predicted RBP	4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	MRPL42	Q9Y6G3	142 aa	Known RBP	4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	PCSK5	Q92824	1860 aa		4.92	□□□□□ -1.62
UBR4-215	ENST00000492606	MYH7B	A7E2Y1	1941 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	RP1L1	Q8IWN7	2480 aa	Predicted RBP	4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	CSPG4	Q6UVK1	2322 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	TG	P01266	2768 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606		M0R082	166 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	FSCN2	O14926	492 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	PARN	O95453	639 aa	Known RBP	4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	NID1	P14543	1247 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	CDC25B	P30305	580 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	PRKAR2B	P31323	418 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	MCAM	P43121	646 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	INPP5A	Q14642	412 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	PTGIS	Q16647	500 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	ATAT1	Q5SQI0	421 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	ZNF618	Q5T7W0	954 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	ZNF746	Q6NUN9	644 aa	Predicted RBP	4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	NFRKB	Q6P4R8	1299 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	CHSY3	Q70JA7	882 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	CEP68	Q76N32	757 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	OTOP3	Q7RTS5	596 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	PIP4P1	Q86T03	277 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	NOP9	Q86U38	636 aa	Known RBP	4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	REXO1	Q8N1G1	1221 aa	Known RBP	4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	CACTIN-AS1	Q8N1I8	211 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	PNPLA1	Q8N8W4	532 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	ZNF417	Q8TAU3	575 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	GPBAR1	Q8TDU6	330 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	EDARADD	Q8WWZ3	215 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	WNT8B	Q93098	351 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	ZNF689	Q96CS4	500 aa	Predicted RBP	4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	MED8	Q96G25	268 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	KLHDC7B	Q96G42	594 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	LOXL4	Q96JB6	756 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	ZNF587	Q96SQ5	575 aa	Predicted RBP	4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	AP5M1	Q9H0R1	490 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	OSBPL2	Q9H1P3	480 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	EHMT1	Q9H9B1	1298 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	JPH1	Q9HDC5	661 aa	Predicted RBP	4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	TMEM9B	Q9NQ34	198 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	SLC2A4RG	Q9NR83	387 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	VPS45	Q9NRW7	570 aa		4.91	□□□□□ -1.62
UBR4-215	ENST00000492606	CWC25	Q9NXE8	425 aa	Predicted RBP	4.91	□□□□□ -1.62

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