RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 TNFSF13BQ9Y275 285 aa16.76■□□□□ 0.27
COL27A1-206ENST00000490831 SRPRBQ9Y5M8 271 aaKnown RBP16.76■□□□□ 0.27
COL27A1-206ENST00000490831 BDP1A6H8Y1 2624 aa16.75■□□□□ 0.27
COL27A1-206ENST00000490831 C2orf71A6NGG8 1288 aa16.75■□□□□ 0.27
COL27A1-206ENST00000490831 HIDE1A8MVS5 230 aa16.75■□□□□ 0.27
COL27A1-206ENST00000490831 K7ERI5 159 aa16.75■□□□□ 0.27
COL27A1-206ENST00000490831 NRP1O14786 923 aa16.75■□□□□ 0.27
COL27A1-206ENST00000490831 PER2O15055 1255 aa16.75■□□□□ 0.27
COL27A1-206ENST00000490831 EFEMP2O95967 443 aa16.75■□□□□ 0.27
COL27A1-206ENST00000490831 ALDH2P05091 517 aa16.75■□□□□ 0.27
COL27A1-206ENST00000490831 PLS3P13797 630 aa16.75■□□□□ 0.27
COL27A1-206ENST00000490831 AKAP5P24588 427 aa16.75■□□□□ 0.27
COL27A1-206ENST00000490831 SCNN1GP51170 649 aa16.75■□□□□ 0.27
COL27A1-206ENST00000490831 COASYQ13057 564 aa16.75■□□□□ 0.27
COL27A1-206ENST00000490831 SMC1AQ14683 1233 aaKnown RBP16.75■□□□□ 0.27
COL27A1-206ENST00000490831 DCAF4L1Q3SXM0 396 aa16.75■□□□□ 0.27
COL27A1-206ENST00000490831 EEF1DP3Q658K8 133 aa16.75■□□□□ 0.27
COL27A1-206ENST00000490831 VPS52Q8N1B4 723 aa16.75■□□□□ 0.27
COL27A1-206ENST00000490831 VN1R2Q8NFZ6 395 aa16.75■□□□□ 0.27
COL27A1-206ENST00000490831 FAM193BQ96PV7 902 aaPredicted RBP16.75■□□□□ 0.27
COL27A1-206ENST00000490831 ADPGKQ9BRR6 497 aa16.75■□□□□ 0.27
COL27A1-206ENST00000490831 APOL6Q9BWW8 343 aa16.75■□□□□ 0.27
COL27A1-206ENST00000490831 VN1R3Q9BXE9 311 aa16.75■□□□□ 0.27
COL27A1-206ENST00000490831 PTPRHQ9HD43 1115 aa16.75■□□□□ 0.27
COL27A1-206ENST00000490831 KMT5AQ9NQR1 393 aa16.75■□□□□ 0.27
COL27A1-206ENST00000490831 FAM50BQ9Y247 325 aa16.75■□□□□ 0.27
COL27A1-206ENST00000490831 USP20Q9Y2K6 914 aa16.75■□□□□ 0.27
COL27A1-206ENST00000490831 FAN1Q9Y2M0 1017 aa16.75■□□□□ 0.27
COL27A1-206ENST00000490831 CCDC169A6NNP5 214 aa16.74■□□□□ 0.27
COL27A1-206ENST00000490831 SSBP05455 408 aaKnown RBP eCLIP16.74■□□□□ 0.27
COL27A1-206ENST00000490831 CTSAP10619 480 aa16.74■□□□□ 0.27
COL27A1-206ENST00000490831 IL9P15248 144 aa16.74■□□□□ 0.27
COL27A1-206ENST00000490831 PLCG1P19174 1290 aa16.74■□□□□ 0.27
COL27A1-206ENST00000490831 NASPP49321 788 aaPredicted RBP16.74■□□□□ 0.27
COL27A1-206ENST00000490831 NDUFV1P49821 464 aa16.74■□□□□ 0.27
COL27A1-206ENST00000490831 GRIK3Q13003 919 aa16.74■□□□□ 0.27
COL27A1-206ENST00000490831 SMAD4Q13485 552 aaKnown RBP16.74■□□□□ 0.27
COL27A1-206ENST00000490831 BMS1Q14692 1282 aaKnown RBP16.74■□□□□ 0.27
COL27A1-206ENST00000490831 SLC39A14Q15043 492 aa16.74■□□□□ 0.27
COL27A1-206ENST00000490831 KARSQ15046 597 aaKnown RBP16.74■□□□□ 0.27
COL27A1-206ENST00000490831 ATF7IP2Q5U623 682 aa16.74■□□□□ 0.27
COL27A1-206ENST00000490831 EP400NLQ6ZTU2 488 aa16.74■□□□□ 0.27
COL27A1-206ENST00000490831 FAM178BQ8IXR5 827 aa16.74■□□□□ 0.27
COL27A1-206ENST00000490831 RNF168Q8IYW5 571 aaPredicted RBP16.74■□□□□ 0.27
COL27A1-206ENST00000490831 SMRP1Q8NCR6 262 aa16.74■□□□□ 0.27
COL27A1-206ENST00000490831 RAD54LQ92698 747 aa16.74■□□□□ 0.27
COL27A1-206ENST00000490831 USP28Q96RU2 1077 aa16.74■□□□□ 0.27
COL27A1-206ENST00000490831 ACO2Q99798 780 aaKnown RBP16.74■□□□□ 0.27
COL27A1-206ENST00000490831 MARCH5Q9NX47 278 aa16.74■□□□□ 0.27
COL27A1-206ENST00000490831 CD207Q9UJ71 328 aa16.74■□□□□ 0.27
COL27A1-206ENST00000490831 ODF2LQ9ULJ1 636 aa16.74■□□□□ 0.27
COL27A1-206ENST00000490831 TDRD15B5MCY1 1934 aaKnown RBP16.73■□□□□ 0.27
COL27A1-206ENST00000490831 SFI1A8K8P3 1242 aa16.73■□□□□ 0.27
COL27A1-206ENST00000490831 MBTPS2O43462 519 aa16.73■□□□□ 0.27
COL27A1-206ENST00000490831 LIG1P18858 919 aa16.73■□□□□ 0.27
COL27A1-206ENST00000490831 MARCKSP29966 332 aaPredicted RBP16.73■□□□□ 0.27
COL27A1-206ENST00000490831 ZNF131P52739 623 aa16.73■□□□□ 0.27
COL27A1-206ENST00000490831 GIT2Q14161 759 aa16.73■□□□□ 0.27
COL27A1-206ENST00000490831 SMAD2Q15796 467 aaKnown RBP16.73■□□□□ 0.27
COL27A1-206ENST00000490831 USP49Q70CQ1 688 aa16.73■□□□□ 0.27
COL27A1-206ENST00000490831 TMEM161BQ8NDZ6 487 aa16.73■□□□□ 0.27
COL27A1-206ENST00000490831 EPSTI1Q96J88 318 aa16.73■□□□□ 0.27
COL27A1-206ENST00000490831 MRPL4Q9BYD3 311 aaKnown RBP16.73■□□□□ 0.27
COL27A1-206ENST00000490831 SNTG2Q9NY99 539 aa16.73■□□□□ 0.27
COL27A1-206ENST00000490831 PRKAG3Q9UGI9 489 aa16.73■□□□□ 0.27
COL27A1-206ENST00000490831 PARP2Q9UGN5 583 aa16.73■□□□□ 0.27
COL27A1-206ENST00000490831 MYH11P35749 1972 aa16.72■□□□□ 0.27
COL27A1-206ENST00000490831 ABLIM1O14639 778 aa16.72■□□□□ 0.27
COL27A1-206ENST00000490831 PTGESO14684 152 aa16.72■□□□□ 0.27
COL27A1-206ENST00000490831 SLC16A4O15374 487 aa16.72■□□□□ 0.27
COL27A1-206ENST00000490831 RECQL4O94761 1208 aa16.72■□□□□ 0.27
COL27A1-206ENST00000490831 BRD1O95696 1058 aa16.72■□□□□ 0.27
COL27A1-206ENST00000490831 CXCL14O95715 111 aa16.72■□□□□ 0.27
COL27A1-206ENST00000490831 PROZP22891 400 aa16.72■□□□□ 0.27
COL27A1-206ENST00000490831 DDIT3P35638 169 aa16.72■□□□□ 0.27
COL27A1-206ENST00000490831 SMTNP53814 917 aa16.72■□□□□ 0.27
COL27A1-206ENST00000490831 RAD51AP2Q09MP3 1159 aa16.72■□□□□ 0.27
COL27A1-206ENST00000490831 TMEM132AQ24JP5 1023 aa16.72■□□□□ 0.27
COL27A1-206ENST00000490831 APBB1IPQ7Z5R6 666 aaPredicted RBP16.72■□□□□ 0.27
COL27A1-206ENST00000490831 GPBP1Q86WP2 473 aa16.72■□□□□ 0.27
COL27A1-206ENST00000490831 LARP4BQ92615 738 aaKnown RBP16.72■□□□□ 0.27
COL27A1-206ENST00000490831 KLK14Q9P0G3 267 aa16.72■□□□□ 0.27
COL27A1-206ENST00000490831 LARSQ9P2J5 1176 aaKnown RBP16.72■□□□□ 0.27
COL27A1-206ENST00000490831 BARX2Q9UMQ3 279 aaPredicted RBP16.72■□□□□ 0.27
COL27A1-206ENST00000490831 NPHP3-ACAD11A0A0J9YXS1 232 aa16.71■□□□□ 0.27
COL27A1-206ENST00000490831 LILRB3O75022 631 aa16.71■□□□□ 0.27
COL27A1-206ENST00000490831 CLASP2O75122 1294 aaKnown RBP16.71■□□□□ 0.27
COL27A1-206ENST00000490831 MAPTP10636 758 aaKnown RBP16.71■□□□□ 0.27
COL27A1-206ENST00000490831 SCP2P22307 547 aa16.71■□□□□ 0.27
COL27A1-206ENST00000490831 OR1G1P47890 313 aa16.71■□□□□ 0.27
COL27A1-206ENST00000490831 NCKAP1LP55160 1127 aa16.71■□□□□ 0.27
COL27A1-206ENST00000490831 RBM10P98175 930 aaKnown RBP16.71■□□□□ 0.27
COL27A1-206ENST00000490831 MCM6Q14566 821 aa16.71■□□□□ 0.27
COL27A1-206ENST00000490831 PTPN14Q15678 1187 aa16.71■□□□□ 0.27
COL27A1-206ENST00000490831 NAB2Q15742 525 aa16.71■□□□□ 0.27
COL27A1-206ENST00000490831 KRI1Q8N9T8 703 aaKnown RBP16.71■□□□□ 0.27
COL27A1-206ENST00000490831 LINC00301Q8NCQ3 95 aa16.71■□□□□ 0.27
COL27A1-206ENST00000490831 CLIC6Q96NY7 704 aa16.71■□□□□ 0.27
COL27A1-206ENST00000490831 RPS6KC1Q96S38 1066 aa16.71■□□□□ 0.27
COL27A1-206ENST00000490831 REEP2Q9BRK0 252 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms