RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 SEPT11Q9NVA2 429 aaKnown RBP16.13■□□□□ 0.17
COL9A1-208ENST00000489611 MYH9P35579 1960 aaKnown RBP16.13■□□□□ 0.17
COL9A1-208ENST00000489611 GOLGA6CA6NDK9 693 aa16.13■□□□□ 0.17
COL9A1-208ENST00000489611 BHMG1C9JSJ3 638 aaPredicted RBP16.13■□□□□ 0.17
COL9A1-208ENST00000489611 SART1O43290 800 aaKnown RBP16.13■□□□□ 0.17
COL9A1-208ENST00000489611 STBD1O95210 358 aa16.13■□□□□ 0.17
COL9A1-208ENST00000489611 GOLGA6DP0CG33 693 aa16.13■□□□□ 0.17
COL9A1-208ENST00000489611 ADSSP30520 456 aa16.13■□□□□ 0.17
COL9A1-208ENST00000489611 STXBP2Q15833 593 aa16.13■□□□□ 0.17
COL9A1-208ENST00000489611 CD302Q8IX05 232 aa16.13■□□□□ 0.17
COL9A1-208ENST00000489611 GPD1LQ8N335 351 aa16.13■□□□□ 0.17
COL9A1-208ENST00000489611 ZNF526Q8TF50 670 aaPredicted RBP16.13■□□□□ 0.17
COL9A1-208ENST00000489611 LRRC45Q96CN5 670 aa16.13■□□□□ 0.17
COL9A1-208ENST00000489611 A1CFQ9NQ94 594 aaKnown RBP16.13■□□□□ 0.17
COL9A1-208ENST00000489611 GOLGA6AQ9NYA3 693 aa16.13■□□□□ 0.17
COL9A1-208ENST00000489611 SYNGAP1Q96PV0 1343 aa16.12■□□□□ 0.17
COL9A1-208ENST00000489611 RAD51CO43502 376 aa16.12■□□□□ 0.17
COL9A1-208ENST00000489611 ZNF862O60290 1169 aa16.12■□□□□ 0.17
COL9A1-208ENST00000489611 PHACTR2O75167 634 aa16.12■□□□□ 0.17
COL9A1-208ENST00000489611 LRRN2O75325 713 aa16.12■□□□□ 0.17
COL9A1-208ENST00000489611 CARSP49589 748 aaKnown RBP16.12■□□□□ 0.17
COL9A1-208ENST00000489611 ACTR2P61160 394 aa16.12■□□□□ 0.17
COL9A1-208ENST00000489611 GCNT1Q02742 428 aa16.12■□□□□ 0.17
COL9A1-208ENST00000489611 CFAP58Q5T655 872 aa16.12■□□□□ 0.17
COL9A1-208ENST00000489611 SWSAP1Q6NVH7 229 aa16.12■□□□□ 0.17
COL9A1-208ENST00000489611 ARHGEF19Q8IW93 802 aa16.12■□□□□ 0.17
COL9A1-208ENST00000489611 ANKRD13AQ8IZ07 590 aa16.12■□□□□ 0.17
COL9A1-208ENST00000489611 EPS8L1Q8TE68 723 aa16.12■□□□□ 0.17
COL9A1-208ENST00000489611 POMGNT1Q8WZA1 660 aa16.12■□□□□ 0.17
COL9A1-208ENST00000489611 DHX38Q92620 1227 aaKnown RBP16.12■□□□□ 0.17
COL9A1-208ENST00000489611 OTUD5Q96G74 571 aa16.12■□□□□ 0.17
COL9A1-208ENST00000489611 WNK4Q96J92 1243 aa16.12■□□□□ 0.17
COL9A1-208ENST00000489611 THAP2Q9H0W7 228 aa16.12■□□□□ 0.17
COL9A1-208ENST00000489611 ARHGAP28Q9P2N2 729 aa16.12■□□□□ 0.17
COL9A1-208ENST00000489611 NFU1Q9UMS0 254 aa16.12■□□□□ 0.17
COL9A1-208ENST00000489611 PPME1Q9Y570 386 aa16.12■□□□□ 0.17
COL9A1-208ENST00000489611 ERICH4A6NGS2 130 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 TISP43B9A030 160 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 HNRNPDLO14979 420 aaKnown RBP16.11■□□□□ 0.17
COL9A1-208ENST00000489611 ATG7O95352 703 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 GGPS1O95749 300 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 FTLP02792 175 aaPredicted RBP16.11■□□□□ 0.17
COL9A1-208ENST00000489611 ADRB2P07550 413 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 SUPT20HL2P0C7V6 817 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 ABCB4P21439 1286 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 PRKCEQ02156 737 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 CYP24A1Q07973 514 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 SLFN12LQ6IEE8 588 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 CBWD2Q8IUF1 395 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 KLHL7Q8IXQ5 586 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 IQCKQ8N0W5 287 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 PPM1KQ8N3J5 372 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 IFT81Q8WYA0 676 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 SEC14L1Q92503 715 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 GDAP1L1Q96MZ0 367 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 RAB17Q9H0T7 212 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 OSGEPQ9NPF4 335 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 NMRK2Q9NPI5 230 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.11■□□□□ 0.17
COL9A1-208ENST00000489611 RAB20Q9NX57 234 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 UVRAGQ9P2Y5 699 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 NOCTQ9UK39 431 aaKnown RBP16.11■□□□□ 0.17
COL9A1-208ENST00000489611 ZNF233A6NK53 670 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 ANKRD63C9JTQ0 380 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 IRF6O14896 467 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 RGS20O76081 388 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 LDHAP00338 332 aaKnown RBP16.11■□□□□ 0.17
COL9A1-208ENST00000489611 GBP1P32455 592 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 HSPA9P38646 679 aaKnown RBP16.11■□□□□ 0.17
COL9A1-208ENST00000489611 PDE6CP51160 858 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 GYS2P54840 703 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 CLDN10P78369 228 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 STRN3Q13033 797 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 MTMR3Q13615 1198 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 ZSCAN26Q16670 478 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 ZNF677Q86XU0 584 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 RPUSD2Q8IZ73 545 aaKnown RBP16.11■□□□□ 0.17
COL9A1-208ENST00000489611 PLEKHO2Q8TD55 490 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 CASKIN2Q8WXE0 1202 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 RUNDC3BQ96NL0 473 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 FAM114A2Q9NRY5 505 aa16.11■□□□□ 0.17
COL9A1-208ENST00000489611 SEPT9Q9UHD8 586 aaPredicted RBP16.11■□□□□ 0.17
COL9A1-208ENST00000489611 UTP11Q9Y3A2 253 aaKnown RBP16.11■□□□□ 0.17
COL9A1-208ENST00000489611 TMEM150BA6NC51 233 aa16.1■□□□□ 0.17
COL9A1-208ENST00000489611 SPDYE16A6NNV3 312 aaPredicted RBP16.1■□□□□ 0.17
COL9A1-208ENST00000489611 DDX3YO15523 660 aaKnown RBP16.1■□□□□ 0.17
COL9A1-208ENST00000489611 BPIFB4P59827 614 aa16.1■□□□□ 0.17
COL9A1-208ENST00000489611 MAP2K1Q02750 393 aaPredicted RBP16.1■□□□□ 0.17
COL9A1-208ENST00000489611 DHX34Q14147 1143 aaKnown RBP16.1■□□□□ 0.17
COL9A1-208ENST00000489611 SPDYCQ5MJ68 293 aa16.1■□□□□ 0.17
COL9A1-208ENST00000489611 PPP1R2P3Q6NXS1 205 aa16.1■□□□□ 0.17
COL9A1-208ENST00000489611 LRIG3Q6UXM1 1119 aa16.1■□□□□ 0.17
COL9A1-208ENST00000489611 ARMC9Q7Z3E5 817 aa16.1■□□□□ 0.17
COL9A1-208ENST00000489611 EFCAB13Q8IY85 973 aa16.1■□□□□ 0.17
COL9A1-208ENST00000489611 WNT8AQ9H1J5 351 aa16.1■□□□□ 0.17
COL9A1-208ENST00000489611 CTTNBP2NLQ9P2B4 639 aa16.1■□□□□ 0.17
COL9A1-208ENST00000489611 MAFBQ9Y5Q3 323 aaPredicted RBP16.1■□□□□ 0.17
COL9A1-208ENST00000489611 STYXL1Q9Y6J8 313 aa16.1■□□□□ 0.17
COL9A1-208ENST00000489611 EXTL3O43909 919 aa16.09■□□□□ 0.17
COL9A1-208ENST00000489611 SHOX2O60902 331 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms