RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 LRRIQ4A6NIV6 560 aa11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 ZC3H11AO75152 810 aaKnown RBP eCLIP11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 TBX10O75333 385 aa11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 EYA4O95677 639 aa11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 GTF2F1P35269 517 aaKnown RBP eCLIP11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 PBX3P40426 434 aa11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 NDUFV1P49821 464 aa11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 BCAR1P56945 870 aa11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 ERVFC1P60507 584 aa11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 BMS1Q14692 1282 aaKnown RBP11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 PPP2R5AQ15172 486 aa11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 AMHR2Q16671 573 aa11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 ARSHQ5FYA8 562 aa11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 CAVIN1Q6NZI2 390 aaKnown RBP11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 AGMOQ6ZNB7 445 aa11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 MAEAQ7L5Y9 396 aa11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 ZBTB8OSQ8IWT0 167 aa11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 FAM178BQ8IXR5 827 aa11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 HACE1Q8IYU2 909 aa11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 SYT2Q8N9I0 419 aaPredicted RBP11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 SPATA20Q8TB22 786 aa11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 LARP4BQ92615 738 aaKnown RBP11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 STAMQ92783 540 aa11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 ERCC4Q92889 916 aaPredicted RBP11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 TMEM169Q96HH4 297 aa11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 PRIMPOLQ96LW4 560 aa11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 TCF25Q9BQ70 676 aa11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 PYM1Q9BRP8 204 aaKnown RBP11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 C2orf40Q9H1Z8 148 aa11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 CUEDC2Q9H467 287 aa11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 GPRC5CQ9NQ84 441 aa11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 ENTPD7Q9NQZ7 604 aa11.63□□□□□ -0.55
SCAMP4-208ENST00000489554 MYO7AQ13402 2215 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 MYMKA6NI61 221 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 MEIS3P2A8K0S8 358 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 LINC01565O15544 149 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 KINO60870 393 aaKnown RBP11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 PLA2G4BP0C869 781 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 SRGAP2BP0DMP2 458 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 ITGA4P13612 1032 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 IL9P15248 144 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 ARF4P18085 180 aaPredicted RBP11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 NAMPTP43490 491 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 DLX2Q07687 328 aaPredicted RBP11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 DPYDQ12882 1025 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 SMAD4Q13485 552 aaKnown RBP11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 PNOCQ13519 176 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 CAMK4Q16566 473 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 DUSP6Q16828 381 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 CCDC183Q5T5S1 534 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 PLPP4Q5VZY2 271 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 CDCA2Q69YH5 1023 aaPredicted RBP11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 CNNM4Q6P4Q7 775 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 PPP4R3CPQ6ZMV5 832 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 TMC7Q7Z402 723 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 RBM23Q86U06 439 aaKnown RBP11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 SMG8Q8ND04 991 aaKnown RBP11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 KIFAP3Q92845 792 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 DNAJC19Q96DA6 116 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 CPB2Q96IY4 423 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 CDK5RAP3Q96JB5 506 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 RUSC1Q9BVN2 902 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 TRIM6Q9C030 488 aaPredicted RBP11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 NUP62CLQ9H1M0 184 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 BHMT2Q9H2M3 363 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 NRDE2Q9H7Z3 1164 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 MAGEF1Q9HAY2 307 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 PRMT7Q9NVM4 692 aaPredicted RBP11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 STK39Q9UEW8 545 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 PRKAG3Q9UGI9 489 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 CD207Q9UJ71 328 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 DNM3Q9UQ16 869 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 IPPQ9Y573 584 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 PCDHGC5Q9Y5F6 944 aa11.62□□□□□ -0.55
SCAMP4-208ENST00000489554 ATG2AQ2TAZ0 1938 aa11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 A0A1B0GUA9 196 aa11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 GOLGA6L3A6NEY3 463 aa11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 INPPL1O15357 1258 aa11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 KLRC4O43908 158 aa11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 LETM1O95202 739 aaPredicted RBP11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 GALTP07902 379 aa11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 AFMP43652 599 aa11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 COASYQ13057 564 aa11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 CUL4BQ13620 913 aa11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 SMC1AQ14683 1233 aaKnown RBP11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 POSTNQ15063 836 aa11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 SMAD2Q15796 467 aaKnown RBP11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 MAPK6Q16659 721 aa11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 FAM187BQ17R55 369 aa11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 SLC27A1Q6PCB7 646 aa11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 C1orf186Q6ZWK4 172 aa11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 DDX53Q86TM3 631 aaKnown RBP11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 RASSF8Q8NHQ8 419 aa11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 DEPTORQ8TB45 409 aa11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 IGSF21Q96ID5 467 aa11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 MSLNLQ96KJ4 702 aa11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 IFT74Q96LB3 600 aa11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 FAM193BQ96PV7 902 aaPredicted RBP11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 C7orf25Q9BPX7 421 aa11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 TMEM175Q9BSA9 504 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms