RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 BSNDQ8WZ55 320 aa10.04□□□□□ -0.8
HDAC6-232ENST00000489053 ZFP42Q96MM3 310 aa10.04□□□□□ -0.8
HDAC6-232ENST00000489053 CCDC94Q9BW85 323 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-232ENST00000489053 FZD8Q9H461 694 aa10.04□□□□□ -0.8
HDAC6-232ENST00000489053 ZHX3Q9H4I2 956 aa10.04□□□□□ -0.8
HDAC6-232ENST00000489053 PDZD7Q9H5P4 517 aa10.04□□□□□ -0.8
HDAC6-232ENST00000489053 POLD4Q9HCU8 107 aa10.04□□□□□ -0.8
HDAC6-232ENST00000489053 TOPORSQ9NS56 1045 aaPredicted RBP10.04□□□□□ -0.8
HDAC6-232ENST00000489053 DZANK1Q9NVP4 752 aa10.04□□□□□ -0.8
HDAC6-232ENST00000489053 KCND2Q9NZV8 630 aa10.04□□□□□ -0.8
HDAC6-232ENST00000489053 KLK14Q9P0G3 267 aa10.04□□□□□ -0.8
HDAC6-232ENST00000489053 LARSQ9P2J5 1176 aaKnown RBP10.04□□□□□ -0.8
HDAC6-232ENST00000489053 DNAJB4Q9UDY4 337 aa10.04□□□□□ -0.8
HDAC6-232ENST00000489053 DPP7Q9UHL4 492 aa10.04□□□□□ -0.8
HDAC6-232ENST00000489053 GDAQ9Y2T3 454 aa10.04□□□□□ -0.8
HDAC6-232ENST00000489053 NLRC5Q86WI3 1866 aa10.04□□□□□ -0.8
HDAC6-232ENST00000489053 LOXHD1Q8IVV2 1947 aa10.03□□□□□ -0.8
HDAC6-232ENST00000489053 C2orf71A6NGG8 1288 aa10.03□□□□□ -0.8
HDAC6-232ENST00000489053 HIDE1A8MVS5 230 aa10.03□□□□□ -0.8
HDAC6-232ENST00000489053 C2CD2LO14523 706 aa10.03□□□□□ -0.8
HDAC6-232ENST00000489053 NRP1O14786 923 aa10.03□□□□□ -0.8
HDAC6-232ENST00000489053 MBTPS2O43462 519 aa10.03□□□□□ -0.8
HDAC6-232ENST00000489053 STX6O43752 255 aa10.03□□□□□ -0.8
HDAC6-232ENST00000489053 HARSP12081 509 aaKnown RBP10.03□□□□□ -0.8
HDAC6-232ENST00000489053 ALADP13716 330 aa10.03□□□□□ -0.8
HDAC6-232ENST00000489053 HOXB8P17481 243 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-232ENST00000489053 SYT1P21579 422 aa10.03□□□□□ -0.8
HDAC6-232ENST00000489053 GUCY2CP25092 1073 aa10.03□□□□□ -0.8
HDAC6-232ENST00000489053 NPTX2P47972 431 aa10.03□□□□□ -0.8
HDAC6-232ENST00000489053 CREMQ03060 361 aa10.03□□□□□ -0.8
HDAC6-232ENST00000489053 DLX2Q07687 328 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-232ENST00000489053 COL19A1Q14993 1142 aa10.03□□□□□ -0.8
HDAC6-232ENST00000489053 SMAD2Q15796 467 aaKnown RBP10.03□□□□□ -0.8
HDAC6-232ENST00000489053 IL17AQ16552 155 aa10.03□□□□□ -0.8
HDAC6-232ENST00000489053 ZBTB33Q86T24 672 aa10.03□□□□□ -0.8
HDAC6-232ENST00000489053 ADHFE1Q8IWW8 467 aa10.03□□□□□ -0.8
HDAC6-232ENST00000489053 FAM178BQ8IXR5 827 aa10.03□□□□□ -0.8
HDAC6-232ENST00000489053 ZNF396Q96N95 335 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-232ENST00000489053 RUSC1Q9BVN2 902 aa10.03□□□□□ -0.8
HDAC6-232ENST00000489053 APOL5Q9BWW9 433 aa10.03□□□□□ -0.8
HDAC6-232ENST00000489053 ZBP1Q9H171 429 aa10.03□□□□□ -0.8
HDAC6-232ENST00000489053 RNF39Q9H2S5 420 aa10.03□□□□□ -0.8
HDAC6-232ENST00000489053 ZSCAN16Q9H4T2 348 aaPredicted RBP10.03□□□□□ -0.8
HDAC6-232ENST00000489053 SNTG2Q9NY99 539 aa10.03□□□□□ -0.8
HDAC6-232ENST00000489053 ANKFY1Q9P2R3 1169 aa10.03□□□□□ -0.8
HDAC6-232ENST00000489053 MYO7AQ13402 2215 aa10.03□□□□□ -0.8
HDAC6-232ENST00000489053 ZMYM2Q9UBW7 1377 aa10.02□□□□□ -0.8
HDAC6-232ENST00000489053 TULP1O00294 542 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-232ENST00000489053 SLC16A4O15374 487 aa10.02□□□□□ -0.81
HDAC6-232ENST00000489053 RECQL4O94761 1208 aa10.02□□□□□ -0.81
HDAC6-232ENST00000489053 DDHD2O94830 711 aa10.02□□□□□ -0.81
HDAC6-232ENST00000489053 SOD2P04179 222 aa10.02□□□□□ -0.81
HDAC6-232ENST00000489053 THP07101 528 aa10.02□□□□□ -0.81
HDAC6-232ENST00000489053 ADH1AP07327 375 aa10.02□□□□□ -0.81
HDAC6-232ENST00000489053 CTSAP10619 480 aa10.02□□□□□ -0.81
HDAC6-232ENST00000489053 PDIA4P13667 645 aaKnown RBP10.02□□□□□ -0.81
HDAC6-232ENST00000489053 PLS3P13797 630 aa10.02□□□□□ -0.81
HDAC6-232ENST00000489053 PLCG1P19174 1290 aa10.02□□□□□ -0.81
HDAC6-232ENST00000489053 MARCKSP29966 332 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-232ENST00000489053 ABCD1P33897 745 aa10.02□□□□□ -0.81
HDAC6-232ENST00000489053 LTBRP36941 435 aa10.02□□□□□ -0.81
HDAC6-232ENST00000489053 GLUD2P49448 558 aa10.02□□□□□ -0.81
HDAC6-232ENST00000489053 OSTNP61366 133 aa10.02□□□□□ -0.81
HDAC6-232ENST00000489053 COASYQ13057 564 aa10.02□□□□□ -0.81
HDAC6-232ENST00000489053 TUSC3Q13454 348 aa10.02□□□□□ -0.81
HDAC6-232ENST00000489053 STK38Q15208 465 aa10.02□□□□□ -0.81
HDAC6-232ENST00000489053 HYIQ5T013 277 aa10.02□□□□□ -0.81
HDAC6-232ENST00000489053 ANKRD54Q6NXT1 300 aa10.02□□□□□ -0.81
HDAC6-232ENST00000489053 TMEM173Q86WV6 379 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-232ENST00000489053 MYCT1Q8N699 235 aa10.02□□□□□ -0.81
HDAC6-232ENST00000489053 SYT2Q8N9I0 419 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-232ENST00000489053 KRI1Q8N9T8 703 aaKnown RBP10.02□□□□□ -0.81
HDAC6-232ENST00000489053 SMRP1Q8NCR6 262 aa10.02□□□□□ -0.81
HDAC6-232ENST00000489053 AUTS2Q8WXX7 1259 aa10.02□□□□□ -0.81
HDAC6-232ENST00000489053 RIPOR3Q96MK2 946 aa10.02□□□□□ -0.81
HDAC6-232ENST00000489053 MMTAG2Q9BU76 263 aaKnown RBP10.02□□□□□ -0.81
HDAC6-232ENST00000489053 CCDC113Q9H0I3 377 aa10.02□□□□□ -0.81
HDAC6-232ENST00000489053 TSHZ2Q9NRE2 1034 aa10.02□□□□□ -0.81
HDAC6-232ENST00000489053 CLEC1BQ9P126 229 aa10.02□□□□□ -0.81
HDAC6-232ENST00000489053 USP15Q9Y4E8 981 aaPredicted RBP10.02□□□□□ -0.81
HDAC6-232ENST00000489053 SF3B1O75533 1304 aaKnown RBP eCLIP10.02□□□□□ -0.811e-8■■■■■ 103.4
HDAC6-232ENST00000489053 CASTOR2A6NHX0 329 aa10.01□□□□□ -0.81
HDAC6-232ENST00000489053 SFI1A8K8P3 1242 aa10.01□□□□□ -0.81
HDAC6-232ENST00000489053 K7ENM7 598 aa10.01□□□□□ -0.81
HDAC6-232ENST00000489053 CLASP2O75122 1294 aaKnown RBP10.01□□□□□ -0.81
HDAC6-232ENST00000489053 SCP2P22307 547 aa10.01□□□□□ -0.81
HDAC6-232ENST00000489053 AFF1P51825 1210 aaKnown RBP10.01□□□□□ -0.81
HDAC6-232ENST00000489053 ZP2Q05996 745 aa10.01□□□□□ -0.81
HDAC6-232ENST00000489053 ITIH3Q06033 890 aa10.01□□□□□ -0.81
HDAC6-232ENST00000489053 ELAVL2Q12926 359 aaKnown RBP10.01□□□□□ -0.81
HDAC6-232ENST00000489053 HSP90AA2PQ14568 343 aaPredicted RBP10.01□□□□□ -0.81
HDAC6-232ENST00000489053 KARSQ15046 597 aaKnown RBP10.01□□□□□ -0.81
HDAC6-232ENST00000489053 PTPN14Q15678 1187 aa10.01□□□□□ -0.81
HDAC6-232ENST00000489053 USP41Q3LFD5 358 aa10.01□□□□□ -0.81
HDAC6-232ENST00000489053 TMEM119Q4V9L6 283 aa10.01□□□□□ -0.81
HDAC6-232ENST00000489053 C1orf186Q6ZWK4 172 aa10.01□□□□□ -0.81
HDAC6-232ENST00000489053 KCNK18Q7Z418 384 aa10.01□□□□□ -0.81
HDAC6-232ENST00000489053 COLGALT2Q8IYK4 626 aa10.01□□□□□ -0.81
HDAC6-232ENST00000489053 SPIRE2Q8WWL2 714 aa10.01□□□□□ -0.81
HDAC6-232ENST00000489053 LARP4BQ92615 738 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms