RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 PDE12Q6L8Q7 609 aaKnown RBP17.55■□□□□ 0.4
CTDSP1-209ENST00000488627 COLGALT2Q8IYK4 626 aa17.55■□□□□ 0.4
CTDSP1-209ENST00000488627 HACE1Q8IYU2 909 aa17.55■□□□□ 0.4
CTDSP1-209ENST00000488627 MICAL1Q8TDZ2 1067 aa17.55■□□□□ 0.4
CTDSP1-209ENST00000488627 LARP4BQ92615 738 aaKnown RBP17.55■□□□□ 0.4
CTDSP1-209ENST00000488627 TARS2Q9BW92 718 aaKnown RBP17.55■□□□□ 0.4
CTDSP1-209ENST00000488627 VN1R3Q9BXE9 311 aa17.55■□□□□ 0.4
CTDSP1-209ENST00000488627 GBP3Q9H0R5 595 aa17.55■□□□□ 0.4
CTDSP1-209ENST00000488627 CARNS1A5YM72 827 aa17.54■□□□□ 0.4
CTDSP1-209ENST00000488627 LINC01565O15544 149 aa17.54■□□□□ 0.4
CTDSP1-209ENST00000488627 YEATS4O95619 227 aa17.54■□□□□ 0.4
CTDSP1-209ENST00000488627 ALDH2P05091 517 aa17.54■□□□□ 0.4
CTDSP1-209ENST00000488627 MAPTP10636 758 aaKnown RBP17.54■□□□□ 0.4
CTDSP1-209ENST00000488627 DLX2Q07687 328 aaPredicted RBP17.54■□□□□ 0.4
CTDSP1-209ENST00000488627 STK38Q15208 465 aa17.54■□□□□ 0.4
CTDSP1-209ENST00000488627 LEXMQ3ZCV2 418 aa17.54■□□□□ 0.4
CTDSP1-209ENST00000488627 DDX53Q86TM3 631 aaKnown RBP17.54■□□□□ 0.4
CTDSP1-209ENST00000488627 RASSF8Q8NHQ8 419 aa17.54■□□□□ 0.4
CTDSP1-209ENST00000488627 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.54■□□□□ 0.4
CTDSP1-209ENST00000488627 TMEM169Q96HH4 297 aa17.54■□□□□ 0.4
CTDSP1-209ENST00000488627 FIZ1Q96SL8 496 aa17.54■□□□□ 0.4
CTDSP1-209ENST00000488627 TCF25Q9BQ70 676 aa17.54■□□□□ 0.4
CTDSP1-209ENST00000488627 TMEM175Q9BSA9 504 aa17.54■□□□□ 0.4
CTDSP1-209ENST00000488627 CXCL16Q9H2A7 254 aa17.54■□□□□ 0.4
CTDSP1-209ENST00000488627 IGFLR1Q9H665 355 aa17.54■□□□□ 0.4
CTDSP1-209ENST00000488627 SNTG2Q9NY99 539 aa17.54■□□□□ 0.4
CTDSP1-209ENST00000488627 KLK14Q9P0G3 267 aa17.54■□□□□ 0.4
CTDSP1-209ENST00000488627 STK17AQ9UEE5 414 aa17.54■□□□□ 0.4
CTDSP1-209ENST00000488627 DAXXQ9UER7 740 aaPredicted RBP17.54■□□□□ 0.4
CTDSP1-209ENST00000488627 CCDC39Q9UFE4 941 aa17.54■□□□□ 0.4
CTDSP1-209ENST00000488627 PARP2Q9UGN5 583 aa17.54■□□□□ 0.4
CTDSP1-209ENST00000488627 KCNG1Q9UIX4 513 aa17.54■□□□□ 0.4
CTDSP1-209ENST00000488627 ZDHHC9Q9Y397 364 aa17.54■□□□□ 0.4
CTDSP1-209ENST00000488627 ZMYM2Q9UBW7 1377 aa17.53■□□□□ 0.4
CTDSP1-209ENST00000488627 HIDE1A8MVS5 230 aa17.53■□□□□ 0.4
CTDSP1-209ENST00000488627 NRP1O14786 923 aa17.53■□□□□ 0.4
CTDSP1-209ENST00000488627 PER2O15055 1255 aa17.53■□□□□ 0.4
CTDSP1-209ENST00000488627 EFEMP2O95967 443 aa17.53■□□□□ 0.4
CTDSP1-209ENST00000488627 PROZP22891 400 aa17.53■□□□□ 0.4
CTDSP1-209ENST00000488627 NRIP1P48552 1158 aa17.53■□□□□ 0.4
CTDSP1-209ENST00000488627 SMTNP53814 917 aa17.53■□□□□ 0.4
CTDSP1-209ENST00000488627 NCKAP1LP55160 1127 aa17.53■□□□□ 0.4
CTDSP1-209ENST00000488627 TMEM132AQ24JP5 1023 aa17.53■□□□□ 0.4
CTDSP1-209ENST00000488627 FOXD4L6Q3SYB3 417 aaPredicted RBP17.53■□□□□ 0.4
CTDSP1-209ENST00000488627 AXDND1Q5T1B0 1012 aaPredicted RBP17.53■□□□□ 0.4
CTDSP1-209ENST00000488627 RRAGBQ5VZM2 374 aa17.53■□□□□ 0.4
CTDSP1-209ENST00000488627 FOXD4L3Q6VB84 417 aaPredicted RBP17.53■□□□□ 0.4
CTDSP1-209ENST00000488627 RBM23Q86U06 439 aaKnown RBP17.53■□□□□ 0.4
CTDSP1-209ENST00000488627 EFHBQ8N7U6 833 aa17.53■□□□□ 0.4
CTDSP1-209ENST00000488627 MRPL43Q8N983 215 aaKnown RBP17.53■□□□□ 0.4
CTDSP1-209ENST00000488627 ADPGKQ9BRR6 497 aa17.53■□□□□ 0.4
CTDSP1-209ENST00000488627 MRPL4Q9BYD3 311 aaKnown RBP17.53■□□□□ 0.4
CTDSP1-209ENST00000488627 TLE6Q9H808 572 aa17.53■□□□□ 0.4
CTDSP1-209ENST00000488627 NGRNQ9NPE2 291 aaKnown RBP17.53■□□□□ 0.4
CTDSP1-209ENST00000488627 MARCH5Q9NX47 278 aa17.53■□□□□ 0.4
CTDSP1-209ENST00000488627 CLDND1Q9NY35 253 aa17.53■□□□□ 0.4
CTDSP1-209ENST00000488627 LARSQ9P2J5 1176 aaKnown RBP17.53■□□□□ 0.4
CTDSP1-209ENST00000488627 FAN1Q9Y2M0 1017 aa17.53■□□□□ 0.4
CTDSP1-209ENST00000488627 KIAA1671Q9BY89 1806 aa17.53■□□□□ 0.4
CTDSP1-209ENST00000488627 TTC28Q96AY4 2481 aa17.52■□□□□ 0.4
CTDSP1-209ENST00000488627 H3BQ06 376 aaPredicted RBP17.52■□□□□ 0.4
CTDSP1-209ENST00000488627 PTGESO14684 152 aa17.52■□□□□ 0.4
CTDSP1-209ENST00000488627 RECQL4O94761 1208 aa17.52■□□□□ 0.4
CTDSP1-209ENST00000488627 BRD1O95696 1058 aa17.52■□□□□ 0.4
CTDSP1-209ENST00000488627 KCNC3Q14003 757 aa17.52■□□□□ 0.4
CTDSP1-209ENST00000488627 DUSP6Q16828 381 aa17.52■□□□□ 0.4
CTDSP1-209ENST00000488627 DCAF4L1Q3SXM0 396 aa17.52■□□□□ 0.4
CTDSP1-209ENST00000488627 PLPP4Q5VZY2 271 aa17.52■□□□□ 0.4
CTDSP1-209ENST00000488627 TMC7Q7Z402 723 aa17.52■□□□□ 0.4
CTDSP1-209ENST00000488627 VPS52Q8N1B4 723 aa17.52■□□□□ 0.4
CTDSP1-209ENST00000488627 VN1R2Q8NFZ6 395 aa17.52■□□□□ 0.4
CTDSP1-209ENST00000488627 PPP2R3CQ969Q6 453 aa17.52■□□□□ 0.4
CTDSP1-209ENST00000488627 FAM193BQ96PV7 902 aaPredicted RBP17.52■□□□□ 0.4
CTDSP1-209ENST00000488627 PANK2Q9BZ23 570 aa17.52■□□□□ 0.4
CTDSP1-209ENST00000488627 CDT1Q9H211 546 aa17.52■□□□□ 0.4
CTDSP1-209ENST00000488627 C2orf71A6NGG8 1288 aa17.51■□□□□ 0.39
CTDSP1-209ENST00000488627 TBX10O75333 385 aa17.51■□□□□ 0.39
CTDSP1-209ENST00000488627 GLP2RO95838 553 aa17.51■□□□□ 0.39
CTDSP1-209ENST00000488627 TXLNAP40222 546 aa17.51■□□□□ 0.39
CTDSP1-209ENST00000488627 DNM1Q05193 864 aaKnown RBP17.51■□□□□ 0.39
CTDSP1-209ENST00000488627 GRIK3Q13003 919 aa17.51■□□□□ 0.39
CTDSP1-209ENST00000488627 NAB2Q15742 525 aa17.51■□□□□ 0.39
CTDSP1-209ENST00000488627 ATL3Q6DD88 541 aa17.51■□□□□ 0.39
CTDSP1-209ENST00000488627 SHC4Q6S5L8 630 aa17.51■□□□□ 0.39
CTDSP1-209ENST00000488627 HAUS6Q7Z4H7 955 aa17.51■□□□□ 0.39
CTDSP1-209ENST00000488627 MYCT1Q8N699 235 aa17.51■□□□□ 0.39
CTDSP1-209ENST00000488627 CEP120Q8N960 986 aa17.51■□□□□ 0.39
CTDSP1-209ENST00000488627 ADAMTS19Q8TE59 1207 aa17.51■□□□□ 0.39
CTDSP1-209ENST00000488627 ZBTB45Q96K62 511 aaPredicted RBP17.51■□□□□ 0.39
CTDSP1-209ENST00000488627 MSLNLQ96KJ4 702 aa17.51■□□□□ 0.39
CTDSP1-209ENST00000488627 ZBP1Q9H171 429 aa17.51■□□□□ 0.39
CTDSP1-209ENST00000488627 PARVGQ9HBI0 331 aa17.51■□□□□ 0.39
CTDSP1-209ENST00000488627 ENTPD7Q9NQZ7 604 aa17.51■□□□□ 0.39
CTDSP1-209ENST00000488627 CLEC1BQ9P126 229 aa17.51■□□□□ 0.39
CTDSP1-209ENST00000488627 MYMKA6NI61 221 aa17.5■□□□□ 0.39
CTDSP1-209ENST00000488627 F8W810 466 aa17.5■□□□□ 0.39
CTDSP1-209ENST00000488627 TRAK2O60296 914 aa17.5■□□□□ 0.39
CTDSP1-209ENST00000488627 CUTAO60888 179 aa17.5■□□□□ 0.39
CTDSP1-209ENST00000488627 FAM13AO94988 1023 aa17.5■□□□□ 0.39
CTDSP1-209ENST00000488627 CXCL14O95715 111 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms