RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 GJD3Q8N144 294 aa19.56■□□□□ 0.72
ITGB1-215ENST00000488494 INTS4Q96HW7 963 aaKnown RBP19.56■□□□□ 0.72
ITGB1-215ENST00000488494 AK8Q96MA6 479 aa19.56■□□□□ 0.72
ITGB1-215ENST00000488494 RPS6KC1Q96S38 1066 aa19.56■□□□□ 0.72
ITGB1-215ENST00000488494 ADPGKQ9BRR6 497 aa19.56■□□□□ 0.72
ITGB1-215ENST00000488494 MARCH5Q9NX47 278 aa19.56■□□□□ 0.72
ITGB1-215ENST00000488494 PRKAG3Q9UGI9 489 aa19.56■□□□□ 0.72
ITGB1-215ENST00000488494 FAN1Q9Y2M0 1017 aa19.56■□□□□ 0.72
ITGB1-215ENST00000488494 USP15Q9Y4E8 981 aaPredicted RBP19.56■□□□□ 0.72
ITGB1-215ENST00000488494 NRP1O14786 923 aa19.55■□□□□ 0.72
ITGB1-215ENST00000488494 CXCL14O95715 111 aa19.55■□□□□ 0.72
ITGB1-215ENST00000488494 CTSAP10619 480 aa19.55■□□□□ 0.72
ITGB1-215ENST00000488494 GUCY2CP25092 1073 aa19.55■□□□□ 0.72
ITGB1-215ENST00000488494 OR1G1P47890 313 aa19.55■□□□□ 0.72
ITGB1-215ENST00000488494 GRIN1Q05586 938 aa19.55■□□□□ 0.72
ITGB1-215ENST00000488494 GRIK3Q13003 919 aa19.55■□□□□ 0.72
ITGB1-215ENST00000488494 KCNC3Q14003 757 aa19.55■□□□□ 0.72
ITGB1-215ENST00000488494 ADHFE1Q8IWW8 467 aa19.55■□□□□ 0.72
ITGB1-215ENST00000488494 GSTCDQ8NEC7 633 aa19.55■□□□□ 0.72
ITGB1-215ENST00000488494 KHSRPQ92945 711 aaKnown RBP eCLIP19.55■□□□□ 0.724e-6■■□□□ 14.1
ITGB1-215ENST00000488494 MIOSQ9NXC5 875 aa19.55■□□□□ 0.72
ITGB1-215ENST00000488494 TDRD15B5MCY1 1934 aaKnown RBP19.55■□□□□ 0.72
ITGB1-215ENST00000488494 F8W810 466 aa19.54■□□□□ 0.72
ITGB1-215ENST00000488494 CLASP2O75122 1294 aaKnown RBP19.54■□□□□ 0.72
ITGB1-215ENST00000488494 RECQL4O94761 1208 aa19.54■□□□□ 0.72
ITGB1-215ENST00000488494 ALDH2P05091 517 aa19.54■□□□□ 0.72
ITGB1-215ENST00000488494 PLA2G4BP0C869 781 aa19.54■□□□□ 0.72
ITGB1-215ENST00000488494 UBA7P41226 1012 aa19.54■□□□□ 0.72
ITGB1-215ENST00000488494 SLC12A3P55017 1021 aa19.54■□□□□ 0.72
ITGB1-215ENST00000488494 PTPN14Q15678 1187 aa19.54■□□□□ 0.72
ITGB1-215ENST00000488494 DCAF4L1Q3SXM0 396 aa19.54■□□□□ 0.72
ITGB1-215ENST00000488494 NT5DC1Q5TFE4 455 aa19.54■□□□□ 0.72
ITGB1-215ENST00000488494 ATF7IP2Q5U623 682 aa19.54■□□□□ 0.72
ITGB1-215ENST00000488494 RASSF8Q8NHQ8 419 aa19.54■□□□□ 0.72
ITGB1-215ENST00000488494 TIPINQ9BVW5 301 aa19.54■□□□□ 0.72
ITGB1-215ENST00000488494 KMT5AQ9NQR1 393 aa19.54■□□□□ 0.72
ITGB1-215ENST00000488494 ARHGAP28Q9P2N2 729 aa19.54■□□□□ 0.72
ITGB1-215ENST00000488494 STK39Q9UEW8 545 aa19.54■□□□□ 0.72
ITGB1-215ENST00000488494 HCFC2Q9Y5Z7 792 aa19.54■□□□□ 0.72
ITGB1-215ENST00000488494 CLIC4Q9Y696 253 aa19.54■□□□□ 0.72
ITGB1-215ENST00000488494 K7ERI5 159 aa19.53■□□□□ 0.72
ITGB1-215ENST00000488494 LONP1P36776 959 aaKnown RBP19.53■□□□□ 0.72
ITGB1-215ENST00000488494 ANKRD54Q6NXT1 300 aa19.53■□□□□ 0.72
ITGB1-215ENST00000488494 FAM173BQ6P4H8 233 aa19.53■□□□□ 0.72
ITGB1-215ENST00000488494 TMEM184AQ6ZMB5 413 aa19.53■□□□□ 0.72
ITGB1-215ENST00000488494 KCTD17Q8N5Z5 321 aa19.53■□□□□ 0.72
ITGB1-215ENST00000488494 SYT2Q8N9I0 419 aaPredicted RBP19.53■□□□□ 0.72
ITGB1-215ENST00000488494 TMEM87AQ8NBN3 555 aa19.53■□□□□ 0.72
ITGB1-215ENST00000488494 CASP10Q92851 521 aa19.53■□□□□ 0.72
ITGB1-215ENST00000488494 CALML4Q96GE6 196 aa19.53■□□□□ 0.72
ITGB1-215ENST00000488494 POP1Q99575 1024 aaKnown RBP19.53■□□□□ 0.72
ITGB1-215ENST00000488494 HERC2P3Q9BVR0 1158 aa19.53■□□□□ 0.72
ITGB1-215ENST00000488494 APOL5Q9BWW9 433 aa19.53■□□□□ 0.72
ITGB1-215ENST00000488494 SNTG2Q9NY99 539 aa19.53■□□□□ 0.72
ITGB1-215ENST00000488494 NPHP3-ACAD11A0A0J9YXS1 232 aa19.52■□□□□ 0.72
ITGB1-215ENST00000488494 SFI1A8K8P3 1242 aa19.52■□□□□ 0.72
ITGB1-215ENST00000488494 SLC16A4O15374 487 aa19.52■□□□□ 0.72
ITGB1-215ENST00000488494 SLC26A4O43511 780 aa19.52■□□□□ 0.72
ITGB1-215ENST00000488494 PLCG1P19174 1290 aa19.52■□□□□ 0.72
ITGB1-215ENST00000488494 CACNB1Q02641 598 aaPredicted RBP19.52■□□□□ 0.72
ITGB1-215ENST00000488494 GIT2Q14161 759 aa19.52■□□□□ 0.72
ITGB1-215ENST00000488494 TAS1R3Q7RTX0 852 aa19.52■□□□□ 0.72
ITGB1-215ENST00000488494 LRRC15Q8TF66 581 aa19.52■□□□□ 0.72
ITGB1-215ENST00000488494 C17orf75Q9HAS0 396 aa19.52■□□□□ 0.72
ITGB1-215ENST00000488494 KCND2Q9NZV8 630 aa19.52■□□□□ 0.72
ITGB1-215ENST00000488494 CACNG4Q9UBN1 327 aa19.52■□□□□ 0.72
ITGB1-215ENST00000488494 MTMR6Q9Y217 621 aa19.52■□□□□ 0.72
ITGB1-215ENST00000488494 GDAQ9Y2T3 454 aa19.52■□□□□ 0.72
ITGB1-215ENST00000488494 IRAK3Q9Y616 596 aa19.52■□□□□ 0.72
ITGB1-215ENST00000488494 C19orf67A6NJJ6 358 aa19.51■□□□□ 0.71
ITGB1-215ENST00000488494 PTGESO14684 152 aa19.51■□□□□ 0.71
ITGB1-215ENST00000488494 NR1I2O75469 434 aa19.51■□□□□ 0.71
ITGB1-215ENST00000488494 URODP06132 367 aa19.51■□□□□ 0.71
ITGB1-215ENST00000488494 PLS3P13797 630 aa19.51■□□□□ 0.71
ITGB1-215ENST00000488494 KARSQ15046 597 aaKnown RBP19.51■□□□□ 0.71
ITGB1-215ENST00000488494 PTPAQ15257 358 aa19.51■□□□□ 0.71
ITGB1-215ENST00000488494 ZNF568Q3ZCX4 644 aa19.51■□□□□ 0.71
ITGB1-215ENST00000488494 SYCE2Q6PIF2 218 aa19.51■□□□□ 0.71
ITGB1-215ENST00000488494 APBB1IPQ7Z5R6 666 aaPredicted RBP19.51■□□□□ 0.71
ITGB1-215ENST00000488494 GPBP1Q86WP2 473 aa19.51■□□□□ 0.71
ITGB1-215ENST00000488494 RABGGTAQ92696 567 aa19.51■□□□□ 0.71
ITGB1-215ENST00000488494 MRPL4Q9BYD3 311 aaKnown RBP19.51■□□□□ 0.71
ITGB1-215ENST00000488494 CXCL16Q9H2A7 254 aa19.51■□□□□ 0.71
ITGB1-215ENST00000488494 TMEM134Q9H6X4 195 aa19.51■□□□□ 0.71
ITGB1-215ENST00000488494 TNFSF13BQ9Y275 285 aa19.51■□□□□ 0.71
ITGB1-215ENST00000488494 CASTOR2A6NHX0 329 aa19.5■□□□□ 0.71
ITGB1-215ENST00000488494 C2CD2LO14523 706 aa19.5■□□□□ 0.71
ITGB1-215ENST00000488494 SOD2P04179 222 aa19.5■□□□□ 0.71
ITGB1-215ENST00000488494 EPCAMP16422 314 aa19.5■□□□□ 0.71
ITGB1-215ENST00000488494 MARCKSP29966 332 aaPredicted RBP19.5■□□□□ 0.71
ITGB1-215ENST00000488494 CEBPZQ03701 1054 aaKnown RBP19.5■□□□□ 0.71
ITGB1-215ENST00000488494 DHX8Q14562 1220 aaKnown RBP19.5■□□□□ 0.71
ITGB1-215ENST00000488494 HSCBQ8IWL3 235 aa19.5■□□□□ 0.71
ITGB1-215ENST00000488494 SPIRE2Q8WWL2 714 aa19.5■□□□□ 0.71
ITGB1-215ENST00000488494 SUSD6Q92537 303 aa19.5■□□□□ 0.71
ITGB1-215ENST00000488494 SNX21Q969T3 373 aa19.5■□□□□ 0.71
ITGB1-215ENST00000488494 ACO2Q99798 780 aaKnown RBP19.5■□□□□ 0.71
ITGB1-215ENST00000488494 TARS2Q9BW92 718 aaKnown RBP19.5■□□□□ 0.71
ITGB1-215ENST00000488494 CDT1Q9H211 546 aa19.5■□□□□ 0.71
ITGB1-215ENST00000488494 S1PR5Q9H228 398 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms